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Cellular Component
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Analyze GeneStrainQTL List |
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![]() Biological Process Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | | IBA | PANTHER:PTN000383164, SGD:S000003377 | 2290270 | (PMID:21873635) | GO_Central | PMID:21873635 | |
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1. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
2. | RGD automated import pipeline for gene-chemical interactions |
PubMed | 10349636 10922068 11042159 11076861 11217851 12466851 12477932 12520002 12904583 14610273 15489334 15782199 16141072 16141073 16934000 21267068 21565611 21873635 22922362 24457600 26167872 26919559 |
Nol10 (Mus musculus - house mouse) |
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NOL10 (Homo sapiens - human) |
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Nol10 (Rattus norvegicus - Norway rat) |
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Nol10 (Chinchilla lanigera - long-tailed chinchilla) |
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NOL10 (Pan paniscus - bonobo/pygmy chimpanzee) |
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NOL10 (Canis lupus familiaris - dog) |
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Nol10 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NOL10 (Sus scrofa - pig) |
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D4Mit226.1 |
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AI579107 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001008421 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_017315015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC155232 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC159815 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK148210 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK160864 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK164400 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK166160 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK211125 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC086676 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466582 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001008421 ⟹ NP_001008421 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
GGTATTCGGGTGGGCCGGCGTTCTGTGACTGCGTGCCGGGCTCCGGCTGCTCCGCGCTGCGATGhide sequence |
RefSeq Acc Id: | XM_017315015 ⟹ XP_017170504 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
CCAGTTCCCGCACGTTGTGCCGGTTCGCCTCGGGTTTGGATGCTAGGGTATTCGGGTGGGCCGGhide sequence |
Protein RefSeqs | NP_001008421 | (Get FASTA) | NCBI Sequence Viewer |
XP_017170504 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH86676 | (Get FASTA) | NCBI Sequence Viewer |
BAE28415 | (Get FASTA) | NCBI Sequence Viewer | |
BAE36056 | (Get FASTA) | NCBI Sequence Viewer | |
BAE37772 | (Get FASTA) | NCBI Sequence Viewer | |
EDK98492 | (Get FASTA) | NCBI Sequence Viewer | |
Q5RJG1 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001008421 ⟸ NM_001008421 |
- UniProtKB: | Q5RJG1 (UniProtKB/Swiss-Prot), Q3TUB5 (UniProtKB/TrEMBL) |
- Sequence: |
MQVSSLNEVKIYSLSCGKSLPEWLSDRKKRALQKKNVDVRRRIELIQDFEMPTVCTTIKVSKDGhide sequence |
RefSeq Acc Id: | XP_017170504 ⟸ XM_017315015 |
- Peptide Label: | isoform X1 |
- Sequence: |
MPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEVVTFEILSDDYSKIVFLHhide sequence |
RGD ID: | 8677970 | |||||||||
Promoter ID: | EPDNEW_M17016 | |||||||||
Type: | initiation region | |||||||||
Name: | Nol10_1 | |||||||||
Description: | Mus musculus nucleolar protein 10 , mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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RGD ID: | 6823243 | |||||||||
Promoter ID: | MM_KWN:11234 | |||||||||
Type: | CpG-Island | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | |||||||||
Transcripts: | ENSMUST00000046011, LINCRNA_207 | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2684913 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000061458 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSMUSP00000035930 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Transcript | ENSMUST00000046011 | ENTREZGENE, UniProtKB/Swiss-Prot |
InterPro | NOL10/Enp2 | UniProtKB/Swiss-Prot |
NUC153 | UniProtKB/Swiss-Prot | |
WD40_repeat | UniProtKB/Swiss-Prot | |
WD40_repeat_dom_sf | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:217431 | UniProtKB/Swiss-Prot |
MGD | MGI:2684913 | ENTREZGENE |
NCBI Gene | 217431 | ENTREZGENE |
PANTHER | PTHR14927 | UniProtKB/Swiss-Prot |
Pfam | NUC153 | UniProtKB/Swiss-Prot |
PhenoGen | Nol10 | PhenoGen |
SMART | WD40 | UniProtKB/Swiss-Prot |
Superfamily-SCOP | SSF50978 | UniProtKB/Swiss-Prot |
UniGene | Mm.27536 | ENTREZGENE |
UniProt | NOL10_MOUSE | UniProtKB/Swiss-Prot |
Q3TPG4_MOUSE | UniProtKB/TrEMBL | |
Q3TUB5 | ENTREZGENE, UniProtKB/TrEMBL | |
Q3UFZ4_MOUSE | UniProtKB/TrEMBL | |
Q5RJG1 | ENTREZGENE |
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More on Nol10 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: mm9 mm10 |
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MGI Report |
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NCBI Genome Data Viewer |
RGD Object Information | |
RGD ID: | 1621355 |
Created: | 2007-05-01 |
Species: | Mus musculus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.