Camkv (CaM kinase-like vesicle-associated) - Rat Genome Database
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Gene: Camkv (CaM kinase-like vesicle-associated) Mus musculus
Analyze
Symbol: Camkv
Name: CaM kinase-like vesicle-associated
RGD ID: 1621313
MGI Page MGI
Description: Predicted to have calmodulin binding activity and calmodulin-dependent protein kinase activity. Involved in regulation of modification of postsynaptic structure. Localizes to glutamatergic synapse. Is expressed in brain; phalanx; and spinal cord. Orthologous to human CAMKV (CaM kinase like vesicle associated); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 1G5; BB074618; BC017634; caM kinase-like vesicle-associated protein; MGC118008; MGC28873; vesicle-associated calmodulin-binding protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,812,878 - 107,826,890 (+)NCBIGRCm39mm39
GRCm389107,935,851 - 107,949,691 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,935,674 - 107,949,691 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,838,251 - 107,852,022 (+)NCBIGRCm37mm9NCBIm37
MGSCv369107,794,021 - 107,807,792 (+)NCBImm8
Celera9107,544,336 - 107,558,113 (+)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15033168   PMID:15345747   PMID:15489334   PMID:16141072  
PMID:16141073   PMID:16512683   PMID:16959763   PMID:18799693   PMID:21267068   PMID:21873635   PMID:27160897   PMID:27796283   PMID:28671696   PMID:30068389   PMID:30562941  


Genomics

Comparative Map Data
Camkv
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,812,878 - 107,826,890 (+)NCBIGRCm39mm39
GRCm389107,935,851 - 107,949,691 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,935,674 - 107,949,691 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,838,251 - 107,852,022 (+)NCBIGRCm37mm9NCBIm37
MGSCv369107,794,021 - 107,807,792 (+)NCBImm8
Celera9107,544,336 - 107,558,113 (+)NCBICelera
Cytogenetic Map9F1NCBI
CAMKV
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl349,857,988 - 49,869,935 (-)EnsemblGRCh38hg38GRCh38
GRCh38349,857,989 - 49,869,906 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37349,895,414 - 49,907,655 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,870,426 - 49,882,373 (-)NCBINCBI36hg18NCBI36
Celera349,861,230 - 49,873,180 (-)NCBI
Cytogenetic Map3p21.31NCBI
HuRef349,953,963 - 49,965,913 (-)NCBIHuRef
CHM1_1349,847,487 - 49,859,730 (-)NCBICHM1_1
Camkv
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08116,715,755 - 116,730,061 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,715,755 - 116,730,061 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,070,039 - 116,084,385 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,205,817 - 113,220,164 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18113,225,271 - 113,239,619 (+)NCBI
Celera8107,940,559 - 107,945,614 (+)NCBICelera
Cytogenetic Map8q32NCBI
Camkv
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,747,359 - 1,760,110 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,747,359 - 1,762,978 (-)NCBIChiLan1.0ChiLan1.0
CAMKV
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1351,026,103 - 51,038,318 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl351,026,111 - 51,038,064 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0349,789,838 - 49,801,795 (-)NCBIMhudiblu_PPA_v0panPan3
CAMKV
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2039,424,519 - 39,427,612 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12039,413,050 - 39,428,973 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Camkv
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365291,466,460 - 1,479,798 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMKV
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,381,117 - 32,396,791 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11332,381,122 - 32,401,480 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,561,866 - 35,573,720 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMKV
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12211,264,349 - 11,276,616 (-)NCBI
ChlSab1.1 Ensembl2211,263,584 - 11,276,543 (-)Ensembl
Camkv
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247303,775,961 - 3,805,137 (-)NCBI

Position Markers
BB074618  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,949,508 - 107,949,644UniSTSGRCm38
MGSCv379107,851,839 - 107,851,975UniSTSGRCm37
Celera9107,557,930 - 107,558,066UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map9F1-F2UniSTS
Whitehead/MRC_RH91111.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:628
Count of miRNA genes:377
Interacting mature miRNAs:449
Transcripts:ENSMUST00000035700
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000035700   ⟹   ENSMUSP00000040430
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,935,674 - 107,949,691 (+)Ensembl
RefSeq Acc Id: ENSMUST00000192318
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,935,898 - 107,949,677 (+)Ensembl
RefSeq Acc Id: ENSMUST00000193533   ⟹   ENSMUSP00000141347
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,935,908 - 107,946,188 (+)Ensembl
RefSeq Acc Id: ENSMUST00000194206   ⟹   ENSMUSP00000141444
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,945,259 - 107,949,683 (+)Ensembl
RefSeq Acc Id: ENSMUST00000195219   ⟹   ENSMUSP00000142005
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,937,300 - 107,945,537 (+)Ensembl
RefSeq Acc Id: NM_145621   ⟹   NP_663596
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,813,119 - 107,826,890 (+)NCBI
GRCm389107,935,920 - 107,949,691 (+)NCBI
MGSCv379107,838,251 - 107,852,022 (+)RGD
Celera9107,544,336 - 107,558,113 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511722   ⟹   XP_006511785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,812,878 - 107,826,890 (+)NCBI
GRCm389107,936,539 - 107,949,691 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003947887
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,812,878 - 107,826,882 (+)NCBI
GRCm389107,935,851 - 107,949,683 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_663596   ⟸   NM_145621
- UniProtKB: Q3UHL1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006511785   ⟸   XM_006511722
- Peptide Label: isoform X1
- UniProtKB: Q3UHL1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000141444   ⟸   ENSMUST00000194206
RefSeq Acc Id: ENSMUSP00000141347   ⟸   ENSMUST00000193533
RefSeq Acc Id: ENSMUSP00000040430   ⟸   ENSMUST00000035700
RefSeq Acc Id: ENSMUSP00000142005   ⟸   ENSMUST00000195219
Protein Domains
Protein kinase

Promoters
RGD ID:8670840
Promoter ID:EPDNEW_M13450
Type:initiation region
Name:Camkv_1
Description:Mus musculus CaM kinase-like vesicle-associated , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389107,935,898 - 107,935,958EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2384296 AgrOrtholog
Ensembl Genes ENSMUSG00000032936 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000040430 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141347 UniProtKB/TrEMBL
  ENSMUSP00000141444 UniProtKB/TrEMBL
  ENSMUSP00000142005 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035700 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193533 UniProtKB/TrEMBL
  ENSMUST00000194206 UniProtKB/TrEMBL
  ENSMUST00000195219 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:235604 UniProtKB/Swiss-Prot
MGD MGI:2384296 ENTREZGENE
NCBI Gene 235604 ENTREZGENE
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Camkv PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.274540 ENTREZGENE
UniProt A0A0A6YW08_MOUSE UniProtKB/TrEMBL
  A0A0A6YW88_MOUSE UniProtKB/TrEMBL
  A0A0A6YXI7_MOUSE UniProtKB/TrEMBL
  CAMKV_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q8VD20 UniProtKB/Swiss-Prot