Catsperg1 (cation channel sperm associated auxiliary subunit gamma 1) - Rat Genome Database

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Gene: Catsperg1 (cation channel sperm associated auxiliary subunit gamma 1) Mus musculus
Analyze
Symbol: Catsperg1
Name: cation channel sperm associated auxiliary subunit gamma 1
RGD ID: 1620474
MGI Page MGI
Description: Predicted to be located in membrane and sperm principal piece. Predicted to be part of CatSper complex. Predicted to be active in motile cilium. Orthologous to human CATSPERG (cation channel sperm associated auxiliary subunit gamma).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A230107C01Rik; cation channel sperm-associated protein subunit gamma; cation channel sperm-associated protein subunit gamma 1; cation channel, sperm-associated, gamma 1; Cats; catsper channel auxiliary subunit gamma 1; Catsperg
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39728,880,957 - 28,915,013 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl728,880,746 - 28,913,460 (-)EnsemblGRCm39 Ensembl
GRCm38729,181,532 - 29,215,589 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,181,321 - 29,214,035 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,966,551 - 29,999,052 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,890,292 - 28,922,751 (-)NCBIMGSCv36mm8
Celera723,751,603 - 23,784,028 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map716.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:16751776   PMID:18799693   PMID:19516020   PMID:21224844  
PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Catsperg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39728,880,957 - 28,915,013 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl728,880,746 - 28,913,460 (-)EnsemblGRCm39 Ensembl
GRCm38729,181,532 - 29,215,589 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,181,321 - 29,214,035 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,966,551 - 29,999,052 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,890,292 - 28,922,751 (-)NCBIMGSCv36mm8
Celera723,751,603 - 23,784,028 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map716.94NCBI
CATSPERG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381938,335,830 - 38,370,943 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1938,335,775 - 38,370,943 (+)EnsemblGRCh38hg38GRCh38
GRCh371938,826,470 - 38,861,583 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361943,518,298 - 43,553,422 (+)NCBINCBI36Build 36hg18NCBI36
Build 341943,518,297 - 43,553,422NCBI
Celera1935,628,680 - 35,663,824 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1935,274,037 - 35,309,181 (+)NCBIHuRef
CHM1_11938,826,802 - 38,861,930 (+)NCBICHM1_1
T2T-CHM13v2.01941,138,006 - 41,173,115 (+)NCBIT2T-CHM13v2.0
Catsperg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8193,616,209 - 93,646,970 (-)NCBIGRCr8
mRatBN7.2184,488,728 - 84,519,495 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl184,488,730 - 84,519,559 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx189,900,015 - 89,930,598 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0198,359,562 - 98,390,223 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0191,655,862 - 91,686,445 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0188,131,282 - 88,162,609 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,131,554 - 88,162,583 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0189,306,662 - 89,337,668 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4184,322,700 - 84,353,333 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1184,403,467 - 84,431,556 (-)NCBI
Celera178,876,360 - 78,906,488 (-)NCBICelera
Cytogenetic Map1q21NCBI
Catsperg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554681,056,197 - 1,099,804 (-)NCBIChiLan1.0ChiLan1.0
CATSPERG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22044,626,423 - 44,661,963 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11946,496,790 - 46,532,327 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01935,429,358 - 35,464,896 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11944,002,172 - 44,034,329 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1944,003,610 - 44,034,323 (+)Ensemblpanpan1.1panPan2
CATSPERG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11114,637,365 - 114,663,180 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1114,637,545 - 114,661,313 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1114,041,198 - 114,066,619 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01115,239,234 - 115,264,663 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1115,239,247 - 115,263,003 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11114,812,158 - 114,837,507 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01114,429,751 - 114,455,143 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01115,468,400 - 115,493,818 (-)NCBIUU_Cfam_GSD_1.0
Catsperg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934912,945,361 - 12,967,640 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049368011,110,754 - 1,133,010 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049368011,110,654 - 1,132,991 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CATSPERG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl647,251,964 - 47,282,829 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1647,252,307 - 47,282,833 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2642,752,676 - 42,783,281 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CATSPERG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1632,980,042 - 33,012,323 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl632,981,763 - 33,012,301 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607310,926,896 - 10,958,621 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Catsperg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479411,805,390 - 11,834,007 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Catsperg1
1051 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2797
Count of miRNA genes:869
Interacting mature miRNAs:1164
Transcripts:ENSMUST00000047846, ENSMUST00000069861, ENSMUST00000085819, ENSMUST00000163445, ENSMUST00000163614, ENSMUST00000163782, ENSMUST00000164653, ENSMUST00000165907, ENSMUST00000166419, ENSMUST00000166654, ENSMUST00000167064, ENSMUST00000169143, ENSMUST00000171102, ENSMUST00000172226
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
7394747asp3_maudiogenic seizure prone 3 (mouse)Not determined72730579836842367Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001164658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003946491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003946492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003946493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC164564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV277263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB633050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ545522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000047846   ⟹   ENSMUSP00000045233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,880,957 - 28,913,458 (-)Ensembl
GRCm38.p6 Ensembl729,181,532 - 29,214,033 (-)Ensembl
RefSeq Acc Id: ENSMUST00000069861   ⟹   ENSMUSP00000067388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,896,175 - 28,910,920 (-)Ensembl
GRCm38.p6 Ensembl729,196,750 - 29,211,495 (-)Ensembl
RefSeq Acc Id: ENSMUST00000085819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,880,959 - 28,913,416 (-)Ensembl
GRCm38.p6 Ensembl729,181,534 - 29,213,991 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163445
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,889,120 - 28,901,730 (-)Ensembl
GRCm38.p6 Ensembl729,189,695 - 29,202,305 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,896,430 - 28,909,934 (-)Ensembl
GRCm38.p6 Ensembl729,197,005 - 29,210,509 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163782   ⟹   ENSMUSP00000127409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,881,010 - 28,910,120 (-)Ensembl
GRCm38.p6 Ensembl729,181,585 - 29,210,695 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164653   ⟹   ENSMUSP00000131827
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,884,876 - 28,913,460 (-)Ensembl
GRCm38.p6 Ensembl729,185,451 - 29,214,035 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165907
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,896,338 - 28,910,509 (-)Ensembl
GRCm38.p6 Ensembl729,196,913 - 29,211,084 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,880,746 - 28,913,409 (-)Ensembl
GRCm38.p6 Ensembl729,181,321 - 29,213,984 (-)Ensembl
RefSeq Acc Id: ENSMUST00000166654
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,889,123 - 28,913,428 (-)Ensembl
GRCm38.p6 Ensembl729,189,698 - 29,214,003 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167064
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,908,259 - 28,913,445 (-)Ensembl
GRCm38.p6 Ensembl729,208,834 - 29,214,020 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169143   ⟹   ENSMUSP00000129837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,880,963 - 28,913,409 (-)Ensembl
GRCm38.p6 Ensembl729,181,538 - 29,213,984 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,884,877 - 28,889,625 (-)Ensembl
GRCm38.p6 Ensembl729,185,452 - 29,190,200 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl728,884,741 - 28,913,407 (-)Ensembl
GRCm38.p6 Ensembl729,185,316 - 29,213,982 (-)Ensembl
RefSeq Acc Id: NM_001164658   ⟹   NP_001158130
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,458 (-)NCBI
GRCm38729,181,532 - 29,214,033 (-)NCBI
MGSCv37729,966,551 - 29,999,052 (-)RGD
Celera723,751,603 - 23,784,028 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001368407   ⟹   NP_001355336
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,910,350 (-)NCBI
GRCm38729,181,532 - 29,210,925 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540074   ⟹   XP_006540137
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540076   ⟹   XP_006540139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540077   ⟹   XP_006540140
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540078   ⟹   XP_006540141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540079   ⟹   XP_006540142
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,271 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540080   ⟹   XP_006540143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540081   ⟹   XP_006540144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540082   ⟹   XP_006540145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,271 (-)NCBI
GRCm38729,181,532 - 29,213,846 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540083   ⟹   XP_006540146
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540085   ⟹   XP_006540148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,271 (-)NCBI
GRCm38729,181,532 - 29,213,846 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540086   ⟹   XP_006540149
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,271 (-)NCBI
GRCm38729,181,532 - 29,213,846 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540090   ⟹   XP_006540153
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,915,013 (-)NCBI
GRCm38729,181,532 - 29,215,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540091   ⟹   XP_006540154
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,457 (-)NCBI
GRCm38729,181,532 - 29,214,032 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540092   ⟹   XP_006540155
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,905,454 - 28,913,286 (-)NCBI
GRCm38729,206,031 - 29,213,861 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540094   ⟹   XP_006540157
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,455 (-)NCBI
GRCm38729,181,532 - 29,214,030 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250600   ⟹   XP_011248902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,884,423 - 28,913,274 (-)NCBI
GRCm38729,184,998 - 29,213,849 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250601   ⟹   XP_011248903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,881,669 - 28,913,274 (-)NCBI
GRCm38729,182,244 - 29,213,849 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017322301   ⟹   XP_017177790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242677   ⟹   XP_030098537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,272 (-)NCBI
GRCm38729,181,532 - 29,213,847 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242678   ⟹   XP_030098538
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,904,835 - 28,913,286 (-)NCBI
GRCm38729,205,410 - 29,213,861 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001785574
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,884,877 - 28,913,274 (-)NCBI
GRCm38729,189,815 - 29,213,849 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003946491
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,880,957 - 28,913,273 (-)NCBI
GRCm38729,181,532 - 29,213,848 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003946492
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,884,877 - 28,913,277 (-)NCBI
GRCm38729,185,452 - 29,213,852 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003946493
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39728,884,877 - 28,913,276 (-)NCBI
GRCm38729,185,452 - 29,213,851 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001158130 (Get FASTA)   NCBI Sequence Viewer  
  NP_001355336 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540137 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540139 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540140 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540141 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540142 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540143 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540144 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540145 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540146 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540148 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540149 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540153 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540154 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540155 (Get FASTA)   NCBI Sequence Viewer  
  XP_006540157 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248902 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248903 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177790 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098537 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098538 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH22688 (Get FASTA)   NCBI Sequence Viewer  
  BAC30276 (Get FASTA)   NCBI Sequence Viewer  
  BAC31237 (Get FASTA)   NCBI Sequence Viewer  
  BAE21603 (Get FASTA)   NCBI Sequence Viewer  
  E9Q355 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000045233
  ENSMUSP00000045233.7
  ENSMUSP00000067388.4
  ENSMUSP00000127409.2
  ENSMUSP00000129837
  ENSMUSP00000129837.2
  ENSMUSP00000131827.2
RefSeq Acc Id: NP_001158130   ⟸   NM_001164658
- Peptide Label: isoform 1 precursor
- UniProtKB: E9Q355 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006540153   ⟸   XM_006540090
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_006540154   ⟸   XM_006540091
- Peptide Label: isoform X16
- UniProtKB: Q8CAA4 (UniProtKB/Swiss-Prot),   Q8C9D6 (UniProtKB/Swiss-Prot),   Q3V0A1 (UniProtKB/Swiss-Prot),   E9QAY8 (UniProtKB/Swiss-Prot),   E9PW02 (UniProtKB/Swiss-Prot),   Q8R5F0 (UniProtKB/Swiss-Prot),   E9Q355 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006540157   ⟸   XM_006540094
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_006540146   ⟸   XM_006540083
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006540149   ⟸   XM_006540086
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006540143   ⟸   XM_006540080
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006540148   ⟸   XM_006540085
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006540145   ⟸   XM_006540082
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006540139   ⟸   XM_006540076
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006540142   ⟸   XM_006540079
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006540141   ⟸   XM_006540078
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006540144   ⟸   XM_006540081
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006540140   ⟸   XM_006540077
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006540137   ⟸   XM_006540074
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006540155   ⟸   XM_006540092
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_011248903   ⟸   XM_011250601
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_011248902   ⟸   XM_011250600
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_017177790   ⟸   XM_017322301
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_030098537   ⟸   XM_030242677
- Peptide Label: isoform X9
RefSeq Acc Id: NP_001355336   ⟸   NM_001368407
- Peptide Label: isoform 2 precursor
- UniProtKB: Q8CAA4 (UniProtKB/Swiss-Prot),   Q8C9D6 (UniProtKB/Swiss-Prot),   Q3V0A1 (UniProtKB/Swiss-Prot),   E9QAY8 (UniProtKB/Swiss-Prot),   E9Q355 (UniProtKB/Swiss-Prot),   E9PW02 (UniProtKB/Swiss-Prot),   Q8R5F0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030098538   ⟸   XM_030242678
- Peptide Label: isoform X18
RefSeq Acc Id: ENSMUSP00000131827   ⟸   ENSMUST00000164653
RefSeq Acc Id: ENSMUSP00000127409   ⟸   ENSMUST00000163782
RefSeq Acc Id: ENSMUSP00000045233   ⟸   ENSMUST00000047846
RefSeq Acc Id: ENSMUSP00000129837   ⟸   ENSMUST00000169143
RefSeq Acc Id: ENSMUSP00000067388   ⟸   ENSMUST00000069861

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q355-F1-model_v2 AlphaFold E9Q355 1-1151 view protein structure

Promoters
RGD ID:6840775
Promoter ID:MM_KWN:49706
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   MEF_B6
Transcripts:ENSMUST00000047846
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36729,996,406 - 29,996,906 (-)MPROMDB
RGD ID:6840776
Promoter ID:MM_KWN:49707
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000069861
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36729,996,786 - 29,997,286 (-)MPROMDB
RGD ID:6840777
Promoter ID:MM_KWN:49708
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000085819,   NM_001164658
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36729,998,406 - 29,998,906 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443617 AgrOrtholog
Ensembl Genes ENSMUSG00000049676 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000047846 ENTREZGENE
  ENSMUST00000047846.13 UniProtKB/Swiss-Prot
  ENSMUST00000069861.4 UniProtKB/Swiss-Prot
  ENSMUST00000163782.8 UniProtKB/TrEMBL
  ENSMUST00000164653.8 UniProtKB/Swiss-Prot
  ENSMUST00000169143 ENTREZGENE
  ENSMUST00000169143.8 UniProtKB/Swiss-Prot
InterPro CATSPERG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320225 UniProtKB/Swiss-Prot
MGD MGI:2443617 ENTREZGENE
NCBI Gene 320225 ENTREZGENE
PANTHER CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT GAMMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14327 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CATSPERG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Catsperg1 PhenoGen
UniProt CTSG1_MOUSE UniProtKB/Swiss-Prot
  E9PW02 ENTREZGENE
  E9Q355 ENTREZGENE
  E9QAY8 ENTREZGENE
  F6TU54_MOUSE UniProtKB/TrEMBL
  Q3V0A1 ENTREZGENE
  Q8C9D6 ENTREZGENE
  Q8CAA4 ENTREZGENE
  Q8R5F0 ENTREZGENE
UniProt Secondary E9PW02 UniProtKB/Swiss-Prot
  E9QAY8 UniProtKB/Swiss-Prot
  Q3V0A1 UniProtKB/Swiss-Prot
  Q8C9D6 UniProtKB/Swiss-Prot
  Q8CAA4 UniProtKB/Swiss-Prot
  Q8R5F0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-21 Catsperg1  cation channel sperm associated auxiliary subunit gamma 1    catsper channel auxiliary subunit gamma 1  Symbol and/or name change 5135510 APPROVED
2013-01-08 Catsperg1  catsper channel auxiliary subunit gamma 1    cation channel, sperm-associated, gamma 1  Symbol and/or name change 5135510 APPROVED