Catsperg1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 28,880,957 - 28,915,013 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 28,880,746 - 28,913,460 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 29,181,532 - 29,215,589 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 29,181,321 - 29,214,035 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 29,966,551 - 29,999,052 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 28,890,292 - 28,922,751 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 23,751,603 - 23,784,028 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | B1 | NCBI | | | | | cM Map | 7 | 16.94 | NCBI | | | | |
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CATSPERG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 19 | 38,335,830 - 38,370,943 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 38,335,775 - 38,370,943 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 38,826,470 - 38,861,583 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 43,518,298 - 43,553,422 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 43,518,297 - 43,553,422 | NCBI | | | | | Celera | 19 | 35,628,680 - 35,663,824 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.2 | NCBI | | | | | HuRef | 19 | 35,274,037 - 35,309,181 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 38,826,802 - 38,861,930 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 41,138,006 - 41,173,115 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Catsperg (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 93,616,209 - 93,646,970 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 84,488,728 - 84,519,495 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 84,488,730 - 84,519,559 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 89,900,015 - 89,930,598 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 98,359,562 - 98,390,223 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 91,655,862 - 91,686,445 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 88,131,282 - 88,162,609 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 88,131,554 - 88,162,583 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 89,306,662 - 89,337,668 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 84,322,700 - 84,353,333 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 84,403,467 - 84,431,556 (-) | NCBI | | | | | Celera | 1 | 78,876,360 - 78,906,488 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
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Catsperg (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955468 | 1,056,197 - 1,099,804 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CATSPERG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 44,626,423 - 44,661,963 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 46,496,790 - 46,532,327 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 35,429,358 - 35,464,896 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 44,002,172 - 44,034,329 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 44,003,610 - 44,034,323 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CATSPERG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 1 | 114,637,365 - 114,663,180 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 114,637,545 - 114,661,313 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 114,041,198 - 114,066,619 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 115,239,234 - 115,264,663 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 115,239,247 - 115,263,003 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 1 | 114,812,158 - 114,837,507 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 114,429,751 - 114,455,143 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 115,468,400 - 115,493,818 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Catsperg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409349 | 12,945,361 - 12,967,640 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936801 | 1,110,754 - 1,133,010 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936801 | 1,110,654 - 1,132,991 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CATSPERG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 47,251,964 - 47,282,829 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 47,252,307 - 47,282,833 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 42,752,676 - 42,783,281 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CATSPERG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 6 | 32,980,042 - 33,012,323 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 32,981,763 - 33,012,301 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666073 | 10,926,896 - 10,958,621 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Catsperg (Heterocephalus glaber - naked mole-rat) |
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