Gm5 (predicted gene 5) - Rat Genome Database

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Gene: Gm5 (predicted gene 5) Mus musculus
Analyze
Symbol: Gm5
Name: predicted gene 5
RGD ID: 1619890
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: Gm1812
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395150,423,212 - 150,425,684 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5150,423,212 - 150,425,769 (-)EnsemblGRCm39 Ensembl
GRCm385150,499,747 - 150,502,219 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5150,499,747 - 150,502,304 (-)EnsemblGRCm38mm10GRCm38
MGSCv375151,302,322 - 151,304,794 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365150,768,126 - 150,770,724 (-)NCBIMGSCv36mm8
Celera5148,504,275 - 148,506,747 (-)NCBICelera
Cytogenetic Map5G3NCBI
cM Map589.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14610273   PMID:21267068  


Genomics

Variants

.
Variants in Gm5
137 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5139985755151658149Mouse

Markers in Region
UniSTS:235378  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385150,502,532 - 150,502,835UniSTSGRCm38
MGSCv375151,305,107 - 151,305,410UniSTSGRCm37
Celera5148,507,060 - 148,507,363UniSTS
Cytogenetic Map5G3UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000202066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,423,280 - 150,425,769 (-)Ensembl
GRCm38.p6 Ensembl5150,499,815 - 150,502,304 (-)Ensembl
RefSeq Acc Id: ENSMUST00000202386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,423,212 - 150,425,598 (-)Ensembl
GRCm38.p6 Ensembl5150,499,747 - 150,502,133 (-)Ensembl
RefSeq Acc Id: NR_024513
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,423,212 - 150,425,684 (-)NCBI
GRCm385150,499,747 - 150,502,219 (-)ENTREZGENE
MGSCv375151,302,322 - 151,304,794 (-)RGD
Celera5148,504,275 - 148,506,747 (-)RGD
cM Map5 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000106738 Ensembl
MGD MGI:2684851 ENTREZGENE
NCBI Gene 194292 ENTREZGENE
PhenoGen Gm5 PhenoGen
RNAcentral URS000075DAFF RNACentral