H2-Aa (histocompatibility 2, class II antigen A, alpha) - Rat Genome Database

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Gene: H2-Aa (histocompatibility 2, class II antigen A, alpha) Mus musculus
Analyze
Symbol: H2-Aa
Name: histocompatibility 2, class II antigen A, alpha
RGD ID: 1619269
MGI Page MGI
Description: Enables peptide antigen binding activity. Involved in response to interferon-gamma. Acts upstream of or within antigen processing and presentation of exogenous peptide antigen via MHC class II and positive regulation of T cell differentiation. Located in external side of plasma membrane and lysosome. Part of MHC class II protein complex. Is expressed in central nervous system; retina; and thymus primordium. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); gastrointestinal system cancer (multiple); glomerulonephritis (multiple); hematologic cancer (multiple); and systemic scleroderma (multiple). Orthologous to several human genes including HLA-DQA1 (major histocompatibility complex, class II, DQ alpha 1); PARTICIPATES IN allograft rejection pathway; antigen processing and presentation pathway; asthma pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A; A alpha; Aalpha; H-2; H-2 class II histocompatibility antigen, A-B alpha chain; H-2 class II histocompatibility antigen, A-D alpha chain; H-2 class II histocompatibility antigen, A-F alpha chain; H-2 class II histocompatibility antigen, A-K alpha chain; H-2 class II histocompatibility antigen, A-Q alpha chain; H-2 class II histocompatibility antigen, A-R alpha chain; H-2 class II histocompatibility antigen, A-S alpha chain; H-2 class II histocompatibility antigen, A-U alpha chain; H-2 class II histocompatibility antigen, I-E alpha chain; H-2Aa; H2Aa; histocompatibility 2, class II antigen A, alpha, promoter 1; HLA class II histocompatibility antigen, DQ alpha 1 chain; I; I-; I-Aalpha; Ia; Ia-1; Ia1; IAalpha; major histocompatibility protein class II alpha chain; MHC class II antigen; MHC class II antigen A alpha isoform-004; MHC class II antigen alpha chain; MHC-II I-A(d) alpha
RGD Orthologs
Human
Rat
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,501,718 - 34,506,797 (-)NCBIGRCm39mm39
GRCm39 Ensembl1734,501,718 - 34,506,797 (-)Ensembl
GRCm381734,282,744 - 34,287,823 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,282,744 - 34,287,823 (-)EnsemblGRCm38mm10GRCm38
MGSCv371734,419,696 - 34,424,716 (-)NCBIGRCm37mm9NCBIm37
MGSCv361733,891,091 - 33,896,110 (-)NCBImm8
Celera1737,044,263 - 37,049,282 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
abdominal aortic aneurysm  (ISO)
achalasia  (ISO)
acute lymphoblastic leukemia  (ISO)
allergic disease  (ISO)
alopecia areata  (ISO)
Amyopathic Dermatomyositis  (ISO)
ankylosing spondylitis  (ISO)
antiphospholipid syndrome  (ISO)
aplastic anemia  (ISO)
arthritis  (ISO)
aspirin-induced respiratory disease  (ISO)
asthma  (ISO)
autoimmune disease  (ISO)
autoimmune myocarditis  (IMP)
autoimmune polyendocrine syndrome  (ISO)
autoimmune polyendocrine syndrome type 2  (ISO)
autoimmune thyroiditis  (ISO)
brain infarction  (ISO)
breast cancer  (ISO)
celiac disease  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
choreatic disease  (ISO)
chronic fatigue syndrome  (ISO)
Chronic Hepatitis B  (ISO)
Chronic Hepatitis C  (ISO)
chronic myeloid leukemia  (ISO)
colon carcinoma  (ISO)
congenital toxoplasmosis  (ISO)
Delayed Hypersensitivity  (ISO)
dermatitis  (ISO)
diffuse scleroderma  (ISO)
dilated cardiomyopathy 1H  (ISO)
Discoid Lupus Erythematosus  (ISO)
Drug Eruptions  (ISO)
eosinophilia-myalgia syndrome  (ISO)
Experimental Autoimmune Encephalomyelitis  (ISO)
Experimental Liver Cirrhosis  (ISO)
factor VIII deficiency  (ISO)
gastric adenocarcinoma  (ISO)
glucose intolerance  (ISO)
Graves' disease  (ISO)
Hashimoto Disease  (ISO)
Helicobacter Infections  (ISO)
Henoch-Schoenlein purpura  (ISO)
hepatitis B  (ISO)
hepatitis C  (ISO)
hepatocellular carcinoma  (ISO)
human immunodeficiency virus infectious disease  (ISO)
hypertension  (ISO)
juvenile rheumatoid arthritis  (ISO)
lepromatous leprosy  (ISO)
liver cirrhosis  (ISO)
lupus nephritis  (ISO)
MALT lymphoma  (ISO)
marginal zone B-cell lymphoma  (ISO)
melanoma  (ISO)
membranous glomerulonephritis  (ISO)
multiple sclerosis  (ISO)
myasthenia gravis  (ISO)
myositis  (ISO)
narcolepsy  (ISO)
Nasal Polyps  (ISO)
onchocerciasis  (ISO)
Oropharyngeal Neoplasms  (ISO)
pancreatitis  (ISO)
paroxysmal nocturnal hemoglobinuria  (ISO)
pemphigus  (ISO)
primary biliary cholangitis  (ISO)
proteinuria  (ISO)
Pseudomonas Infections  (ISO)
psoriasis  (ISO)
rheumatic fever  (ISO)
rheumatic heart disease  (ISO)
rheumatoid arthritis  (ISO)
rhinitis  (ISO)
rhinoscleroma  (ISO)
Schistosomiasis Japonica  (ISO)
Sjogren's syndrome  (ISO)
Spinal Tuberculoses  (ISO)
stomach cancer  (ISO)
Stroke  (ISO)
Sudden Hearing Loss  (ISO)
systemic lupus erythematosus  (ISO)
systemic scleroderma  (ISO)
thrombophilia  (ISO)
tuberculosis  (ISO)
Tubulointerstitial Nephritis and Uveitis  (ISO)
type 1 diabetes mellitus  (ISO)
type 2 diabetes mellitus  (ISO)
uveitis  (ISO)
visceral leishmaniasis  (ISO)
vitiligo  (ISO)
Vogt-Koyanagi-Harada disease  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2,4-dinitrobenzenesulfonic acid  (EXP)
2-butoxyethanol  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3,7-dihydropurine-6-thione  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
acetamide  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
auranofin  (ISO)
azathioprine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
Benzo[k]fluoranthene  (EXP)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
buspirone  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
captan  (EXP)
carbon nanotube  (EXP)
chlordecone  (EXP)
chloroprene  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
coumarin  (ISO)
DDT  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
dichloromethane  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (EXP)
diuron  (ISO)
doxorubicin  (EXP)
ethylbenzene  (ISO)
flutamide  (ISO)
fluvastatin  (ISO)
folic acid  (EXP)
folpet  (EXP)
gentamycin  (ISO)
hydrazine  (EXP)
isoprenaline  (EXP)
lead diacetate  (EXP)
lumiracoxib  (ISO)
menadione  (EXP)
mercaptopurine  (ISO)
mercury atom  (ISO)
mercury dichloride  (ISO)
mercury(0)  (ISO)
N-(6-acetamidohexyl)acetamide  (EXP)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nimesulide  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
palladium  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
PCB138  (EXP)
phenobarbital  (EXP)
pirinixic acid  (EXP)
propanal  (ISO)
propiconazole  (EXP)
purine-6-thiol  (ISO)
quercetin  (EXP)
quercitrin  (ISO)
rotenone  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP)
sodium dichromate  (EXP)
tamoxifen  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
toluene 2,4-diisocyanate  (EXP)
topotecan  (ISO)
tremolite asbestos  (EXP)
Tributyltin oxide  (EXP)
trichloroethene  (ISO)
triptonide  (EXP)
tungsten  (EXP)
valproic acid  (EXP)
vancomycin  (EXP)
vinclozolin  (ISO)
vorinostat  (EXP)

References

References - curated
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Additional References at PubMed
PMID:47219   PMID:72779   PMID:1329933   PMID:1673105   PMID:1855816   PMID:1855817   PMID:1953819   PMID:2574145   PMID:2576007   PMID:2581258   PMID:2882518   PMID:3003909  
PMID:3023699   PMID:3137158   PMID:3500915   PMID:3860873   PMID:6098460   PMID:6198089   PMID:6290895   PMID:6300851   PMID:6309407   PMID:6311906   PMID:7679955   PMID:7722444  
PMID:7732019   PMID:7809906   PMID:7985028   PMID:8102126   PMID:8176204   PMID:8398989   PMID:8543793   PMID:8598040   PMID:8598041   PMID:8638109   PMID:8879564   PMID:9053454  
PMID:9334361   PMID:9432982   PMID:9491996   PMID:9492004   PMID:9529148   PMID:9551894   PMID:9611252   PMID:9687536   PMID:9973410   PMID:10072504   PMID:10349636   PMID:10369935  
PMID:10384102   PMID:10468609   PMID:10491007   PMID:10621974   PMID:11014643   PMID:11027433   PMID:11042159   PMID:11069069   PMID:11076861   PMID:11148202   PMID:11217851   PMID:11283154  
PMID:11465104   PMID:11712854   PMID:11714799   PMID:11854359   PMID:12084926   PMID:12134058   PMID:12466851   PMID:12477932   PMID:12589760   PMID:12938235   PMID:14991600   PMID:15322189  
PMID:15489334   PMID:15536567   PMID:16002707   PMID:16083868   PMID:16141072   PMID:16141073   PMID:16322110   PMID:16546101   PMID:16602821   PMID:16703565   PMID:16775321   PMID:16887989  
PMID:17072917   PMID:17142726   PMID:17404272   PMID:17947646   PMID:18554416   PMID:18593945   PMID:18641299   PMID:18799151   PMID:20360949   PMID:20368287   PMID:20657836   PMID:20696698  
PMID:20881183   PMID:21267068   PMID:21590767   PMID:21635935   PMID:21677750   PMID:21873635   PMID:22505458   PMID:23300712   PMID:23840854   PMID:23977133   PMID:24336796   PMID:24842370  
PMID:25252912   PMID:26618355   PMID:27148821   PMID:28108557   PMID:29411880   PMID:30001419   PMID:30305329   PMID:32376649  


Genomics

Comparative Map Data
H2-Aa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,501,718 - 34,506,797 (-)NCBIGRCm39mm39
GRCm39 Ensembl1734,501,718 - 34,506,797 (-)Ensembl
GRCm381734,282,744 - 34,287,823 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,282,744 - 34,287,823 (-)EnsemblGRCm38mm10GRCm38
MGSCv371734,419,696 - 34,424,716 (-)NCBIGRCm37mm9NCBIm37
MGSCv361733,891,091 - 33,896,110 (-)NCBImm8
Celera1737,044,263 - 37,049,282 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
HLA-DQA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl632,628,179 - 32,647,062 (+)EnsemblGRCh38hg38GRCh38
GRCh38632,637,406 - 32,654,846 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37632,605,183 - 32,611,461 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36632,713,161 - 32,719,407 (+)NCBINCBI36hg18NCBI36
Build 34632,713,160 - 32,719,407NCBI
Cytogenetic Map6p21.32NCBI
HuRef632,346,937 - 32,353,106 (+)NCBIHuRef
CHM1_1632,607,658 - 32,613,904 (+)NCBICHM1_1
RT1-Ba
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2204,575,134 - 4,579,727 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl204,575,134 - 4,579,744 (+)Ensembl
Rnor_6.0204,066,133 - 4,070,726 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,066,132 - 4,070,721 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,146,271 - 6,150,864 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,697,971 - 4,702,564 (+)NCBIRGSC3.4rn4RGSC3.4
Celera206,176,966 - 6,181,559 (+)NCBICelera
Cytogenetic Map20p12NCBI
MHC-DQA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11739,422,445 - 39,428,777 (-)NCBI
ChlSab1.1 Ensembl1739,420,134 - 39,428,871 (-)Ensembl
Vero_WHO_p1.0NW_02366604432,455,961 - 32,462,315 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17312791337128037Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172749681845311728Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172750432261504322Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172765914543574223Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172831148062311728Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172949219034535463Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined172982162963821740Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3072257564722705Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3076892947728778Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173184267837333884Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173244145235301060Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173290000053800000Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173360074735939288Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173400091634956961Mouse
12880399Sst6_msusceptibility to tuberculosis 6 (mouse)173424323434333707Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1216
Count of miRNA genes:482
Interacting mature miRNAs:555
Transcripts:ENSMUST00000040655, ENSMUST00000165139, ENSMUST00000173944, ENSMUST00000174751
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF027865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF050157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF065910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF065911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF119253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF119254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ492982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ633687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ633688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ633699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ748425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM075815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY452201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY740456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY604245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR974422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU424424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU468138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM443574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM443575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM443581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM443584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM443598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KJ650232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KJ663723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU885978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M11356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M11357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M11358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M21931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M24602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MF629191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S49033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  V00832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X52643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X54425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X86147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X86148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X86149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y13073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y13077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y13080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y13081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000040655   ⟹   ENSMUSP00000046105
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,501,718 - 34,506,797 (-)Ensembl
GRCm38.p6 Ensembl1734,282,744 - 34,287,823 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165139
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,502,746 - 34,506,751 (-)Ensembl
GRCm38.p6 Ensembl1734,283,772 - 34,287,777 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173944
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,502,190 - 34,506,797 (-)Ensembl
GRCm38.p6 Ensembl1734,283,216 - 34,287,823 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174751   ⟹   ENSMUSP00000133399
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,501,739 - 34,506,765 (-)Ensembl
GRCm38.p6 Ensembl1734,282,765 - 34,287,791 (-)Ensembl
RefSeq Acc Id: NM_010378   ⟹   NP_034508
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,501,718 - 34,506,797 (-)NCBI
GRCm381734,282,744 - 34,287,823 (-)NCBI
MGSCv371734,419,696 - 34,424,716 (-)RGD
Celera1737,044,263 - 37,049,282 (-)RGD
cM Map17 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_034508 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA39613 (Get FASTA)   NCBI Sequence Viewer  
  AAA39614 (Get FASTA)   NCBI Sequence Viewer  
  AAA39615 (Get FASTA)   NCBI Sequence Viewer  
  AAA39620 (Get FASTA)   NCBI Sequence Viewer  
  AAA39621 (Get FASTA)   NCBI Sequence Viewer  
  AAA39622 (Get FASTA)   NCBI Sequence Viewer  
  AAA39623 (Get FASTA)   NCBI Sequence Viewer  
  AAA39636 (Get FASTA)   NCBI Sequence Viewer  
  AAB24207 (Get FASTA)   NCBI Sequence Viewer  
  AAB81529 (Get FASTA)   NCBI Sequence Viewer  
  AAC05285 (Get FASTA)   NCBI Sequence Viewer  
  AAC17908 (Get FASTA)   NCBI Sequence Viewer  
  AAC17909 (Get FASTA)   NCBI Sequence Viewer  
  AAD31756 (Get FASTA)   NCBI Sequence Viewer  
  AAD31757 (Get FASTA)   NCBI Sequence Viewer  
  AAH19721 (Get FASTA)   NCBI Sequence Viewer  
  AAH29620 (Get FASTA)   NCBI Sequence Viewer  
  AAH31711 (Get FASTA)   NCBI Sequence Viewer  
  AAH43925 (Get FASTA)   NCBI Sequence Viewer  
  AAM51186 (Get FASTA)   NCBI Sequence Viewer  
  AAR19089 (Get FASTA)   NCBI Sequence Viewer  
  AAU94561 (Get FASTA)   NCBI Sequence Viewer  
  AAU94565 (Get FASTA)   NCBI Sequence Viewer  
  AAU94568 (Get FASTA)   NCBI Sequence Viewer  
  AAU94569 (Get FASTA)   NCBI Sequence Viewer  
  AAU94570 (Get FASTA)   NCBI Sequence Viewer  
  AAU94572 (Get FASTA)   NCBI Sequence Viewer  
  AAU94573 (Get FASTA)   NCBI Sequence Viewer  
  AAU94575 (Get FASTA)   NCBI Sequence Viewer  
  AAU94577 (Get FASTA)   NCBI Sequence Viewer  
  AAU94578 (Get FASTA)   NCBI Sequence Viewer  
  AAU94579 (Get FASTA)   NCBI Sequence Viewer  
  ADN26185 (Get FASTA)   NCBI Sequence Viewer  
  ADN26186 (Get FASTA)   NCBI Sequence Viewer  
  ADN26192 (Get FASTA)   NCBI Sequence Viewer  
  ADN26195 (Get FASTA)   NCBI Sequence Viewer  
  ADN26209 (Get FASTA)   NCBI Sequence Viewer  
  AIC84020 (Get FASTA)   NCBI Sequence Viewer  
  AIC84033 (Get FASTA)   NCBI Sequence Viewer  
  AOV80848 (Get FASTA)   NCBI Sequence Viewer  
  AWY63411 (Get FASTA)   NCBI Sequence Viewer  
  AWY63419 (Get FASTA)   NCBI Sequence Viewer  
  AWY63420 (Get FASTA)   NCBI Sequence Viewer  
  AWY63421 (Get FASTA)   NCBI Sequence Viewer  
  AWY63422 (Get FASTA)   NCBI Sequence Viewer  
  AWY63423 (Get FASTA)   NCBI Sequence Viewer  
  AWY63424 (Get FASTA)   NCBI Sequence Viewer  
  AWY63425 (Get FASTA)   NCBI Sequence Viewer  
  AWY63426 (Get FASTA)   NCBI Sequence Viewer  
  BAE42123 (Get FASTA)   NCBI Sequence Viewer  
  BAE42424 (Get FASTA)   NCBI Sequence Viewer  
  CAA24215 (Get FASTA)   NCBI Sequence Viewer  
  CAA36865 (Get FASTA)   NCBI Sequence Viewer  
  CAA38297 (Get FASTA)   NCBI Sequence Viewer  
  CAA73516 (Get FASTA)   NCBI Sequence Viewer  
  CAA73520 (Get FASTA)   NCBI Sequence Viewer  
  CAA73523 (Get FASTA)   NCBI Sequence Viewer  
  CAA73524 (Get FASTA)   NCBI Sequence Viewer  
  CAD37825 (Get FASTA)   NCBI Sequence Viewer  
  CAD37826 (Get FASTA)   NCBI Sequence Viewer  
  CAD37827 (Get FASTA)   NCBI Sequence Viewer  
  CAD37828 (Get FASTA)   NCBI Sequence Viewer  
  CAD37829 (Get FASTA)   NCBI Sequence Viewer  
  CAD37830 (Get FASTA)   NCBI Sequence Viewer  
  CAD37831 (Get FASTA)   NCBI Sequence Viewer  
  CAD37832 (Get FASTA)   NCBI Sequence Viewer  
  CAD37833 (Get FASTA)   NCBI Sequence Viewer  
  CAD37834 (Get FASTA)   NCBI Sequence Viewer  
  CAD37835 (Get FASTA)   NCBI Sequence Viewer  
  CAD37857 (Get FASTA)   NCBI Sequence Viewer  
  CAD37858 (Get FASTA)   NCBI Sequence Viewer  
  CAD37859 (Get FASTA)   NCBI Sequence Viewer  
  CAD37860 (Get FASTA)   NCBI Sequence Viewer  
  CAD37861 (Get FASTA)   NCBI Sequence Viewer  
  CAD37862 (Get FASTA)   NCBI Sequence Viewer  
  CAD37863 (Get FASTA)   NCBI Sequence Viewer  
  CAD37864 (Get FASTA)   NCBI Sequence Viewer  
  CAG23899 (Get FASTA)   NCBI Sequence Viewer  
  CAG23900 (Get FASTA)   NCBI Sequence Viewer  
  CAG23911 (Get FASTA)   NCBI Sequence Viewer  
  CAG38276 (Get FASTA)   NCBI Sequence Viewer  
  CAG38277 (Get FASTA)   NCBI Sequence Viewer  
  CAG38278 (Get FASTA)   NCBI Sequence Viewer  
  CAG38279 (Get FASTA)   NCBI Sequence Viewer  
  CAG38280 (Get FASTA)   NCBI Sequence Viewer  
  CAG38281 (Get FASTA)   NCBI Sequence Viewer  
  CAG38282 (Get FASTA)   NCBI Sequence Viewer  
  CAG38283 (Get FASTA)   NCBI Sequence Viewer  
  CAG38284 (Get FASTA)   NCBI Sequence Viewer  
  CAG38285 (Get FASTA)   NCBI Sequence Viewer  
  CAG38286 (Get FASTA)   NCBI Sequence Viewer  
  CAG38287 (Get FASTA)   NCBI Sequence Viewer  
  CAG38288 (Get FASTA)   NCBI Sequence Viewer  
  CAG38289 (Get FASTA)   NCBI Sequence Viewer  
  CAG38290 (Get FASTA)   NCBI Sequence Viewer  
  CAG38291 (Get FASTA)   NCBI Sequence Viewer  
  CAG38292 (Get FASTA)   NCBI Sequence Viewer  
  CAG38293 (Get FASTA)   NCBI Sequence Viewer  
  CAG38294 (Get FASTA)   NCBI Sequence Viewer  
  CAG38295 (Get FASTA)   NCBI Sequence Viewer  
  CAG38296 (Get FASTA)   NCBI Sequence Viewer  
  CAG38297 (Get FASTA)   NCBI Sequence Viewer  
  CAG38298 (Get FASTA)   NCBI Sequence Viewer  
  CAG38299 (Get FASTA)   NCBI Sequence Viewer  
  CAJ29898 (Get FASTA)   NCBI Sequence Viewer  
  EDL10267 (Get FASTA)   NCBI Sequence Viewer  
  P01910 (Get FASTA)   NCBI Sequence Viewer  
  P04227 (Get FASTA)   NCBI Sequence Viewer  
  P04228 (Get FASTA)   NCBI Sequence Viewer  
  P14434 (Get FASTA)   NCBI Sequence Viewer  
  P14435 (Get FASTA)   NCBI Sequence Viewer  
  P14436 (Get FASTA)   NCBI Sequence Viewer  
  P14437 (Get FASTA)   NCBI Sequence Viewer  
  P14438 (Get FASTA)   NCBI Sequence Viewer  
  P23150 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_034508   ⟸   NM_010378
- Peptide Label: precursor
- UniProtKB: P14434 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000046105   ⟸   ENSMUST00000040655
RefSeq Acc Id: ENSMUSP00000133399   ⟸   ENSMUST00000174751
Protein Domains
Ig-like   Ig-like C1-type   MHC_II_alpha

Promoters
RGD ID:13675684
Promoter ID:EPDNEW_M21991
Type:initiation region
Name:H2-Aa_1
Description:Mus musculus histocompatibility 2, class II antigen A, alpha(H2-Aa), mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,287,822 - 34,287,882EPDNEW
RGD ID:6828211
Promoter ID:MM_KWN:23178
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:UC008CCE.1,   UC008CCF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361734,422,284 - 34,422,784 (-)MPROMDB
RGD ID:6828215
Promoter ID:MM_KWN:23179
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:ENSMUST00000040655,   UC008CCG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361734,423,846 - 34,424,747 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95895 AgrOrtholog
Ensembl Genes ENSMUSG00000036594 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000046105 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133399 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040655 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000174751 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.10.320.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig/MHC_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_I/II-like_Ag-recog UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_II_a/b_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_II_a_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14960 UniProtKB/Swiss-Prot
MGD MGI:95895 ENTREZGENE
NCBI Gene 14960 ENTREZGENE
Pfam C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_II_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen H2-Aa PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG_MHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_II_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A068BD71_MOUSE UniProtKB/TrEMBL
  A0A068BER6_MOUSE UniProtKB/TrEMBL
  A0A1D8M9B5_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWM1_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWP0_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWP8_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWQ8_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWR1_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWR9_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWS8_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWU0_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWW9_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWX9_MOUSE UniProtKB/TrEMBL
  A0A2Z4SWY9_MOUSE UniProtKB/TrEMBL
  A0A2Z4SX01_MOUSE UniProtKB/TrEMBL
  A0A2Z4SX10_MOUSE UniProtKB/TrEMBL
  A0A2Z4SX20_MOUSE UniProtKB/TrEMBL
  A0A2Z4SX34_MOUSE UniProtKB/TrEMBL
  A0A2Z4SXR3_MOUSE UniProtKB/TrEMBL
  A0A2Z4SXS3_MOUSE UniProtKB/TrEMBL
  A0A2Z4SXT3_MOUSE UniProtKB/TrEMBL
  A0A2Z4SXU2_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYA4_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYB3_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYC2_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYD2_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYF4_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYG3_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYH4_MOUSE UniProtKB/TrEMBL
  A0A2Z4SYI4_MOUSE UniProtKB/TrEMBL
  A0A2Z4T0W1_MOUSE UniProtKB/TrEMBL
  A0A2Z4T0X2_MOUSE UniProtKB/TrEMBL
  A0A2Z4T0Y2_MOUSE UniProtKB/TrEMBL
  A0A2Z4T0Z1_MOUSE UniProtKB/TrEMBL
  A0A2Z4T1V4_MOUSE UniProtKB/TrEMBL
  A0A2Z4T1W2_MOUSE UniProtKB/TrEMBL
  A0A2Z4T1W8_MOUSE UniProtKB/TrEMBL
  A0A2Z4T1Y2_MOUSE UniProtKB/TrEMBL
  A0A2Z4T2W9_MOUSE UniProtKB/TrEMBL
  A0A2Z4T2X8_MOUSE UniProtKB/TrEMBL
  A0A2Z4T2Y9_MOUSE UniProtKB/TrEMBL
  A0A2Z4T2Z9_MOUSE UniProtKB/TrEMBL
  G3UWR9_MOUSE UniProtKB/TrEMBL
  HA2B_MOUSE UniProtKB/Swiss-Prot
  HA2D_MOUSE UniProtKB/Swiss-Prot
  HA2F_MOUSE UniProtKB/Swiss-Prot
  HA2J_MOUSE UniProtKB/Swiss-Prot
  HA2K_MOUSE UniProtKB/Swiss-Prot
  HA2Q_MOUSE UniProtKB/Swiss-Prot
  HA2R_MOUSE UniProtKB/Swiss-Prot
  HA2S_MOUSE UniProtKB/Swiss-Prot
  HA2U_MOUSE UniProtKB/Swiss-Prot
  P01910 ENTREZGENE
  P04227 ENTREZGENE
  P04228 ENTREZGENE
  P14434 ENTREZGENE
  P14435 ENTREZGENE
  P14436 ENTREZGENE
  P14437 ENTREZGENE
  P14438 ENTREZGENE
  P23150 ENTREZGENE
  Q3TB90_MOUSE UniProtKB/TrEMBL
  Q549Q3_MOUSE UniProtKB/TrEMBL
  Q5XQL5_MOUSE UniProtKB/TrEMBL
  Q5XQL6_MOUSE UniProtKB/TrEMBL
  Q5XQL7_MOUSE UniProtKB/TrEMBL
  Q5XQL8_MOUSE UniProtKB/TrEMBL
  Q5XQL9_MOUSE UniProtKB/TrEMBL
  Q5XQM0_MOUSE UniProtKB/TrEMBL
  Q5XQM1_MOUSE UniProtKB/TrEMBL
  Q5XQM2_MOUSE UniProtKB/TrEMBL
  Q5XQM3_MOUSE UniProtKB/TrEMBL
  Q5XQM4_MOUSE UniProtKB/TrEMBL
  Q5XQM6_MOUSE UniProtKB/TrEMBL
  Q5XQM8_MOUSE UniProtKB/TrEMBL
  Q5XQM9_MOUSE UniProtKB/TrEMBL
  Q5XQN0_MOUSE UniProtKB/TrEMBL
  Q5XQN1_MOUSE UniProtKB/TrEMBL
  Q5XQN2_MOUSE UniProtKB/TrEMBL
  Q5XQN3_MOUSE UniProtKB/TrEMBL
  Q5XQN4_MOUSE UniProtKB/TrEMBL
  Q6SR48_MOUSE UniProtKB/TrEMBL
  Q860C1_MOUSE UniProtKB/TrEMBL
  Q8K2X0_MOUSE UniProtKB/TrEMBL
  Q9TQ71_MOUSE UniProtKB/TrEMBL
  Q9TQ72_MOUSE UniProtKB/TrEMBL
UniProt Secondary O78195 UniProtKB/Swiss-Prot
  Q3TC34 UniProtKB/TrEMBL
  Q549Q2 UniProtKB/TrEMBL