Nt5c1b (5'-nucleotidase, cytosolic IB) - Rat Genome Database

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Gene: Nt5c1b (5'-nucleotidase, cytosolic IB) Mus musculus
Analyze
Symbol: Nt5c1b
Name: 5'-nucleotidase, cytosolic IB
RGD ID: 1619136
MGI Page MGI
Description: Enables 5'-nucleotidase activity. Involved in AMP catabolic process and allantoin metabolic process. Acts upstream of or within nucleoside metabolic process. Located in cytosol. Is expressed in several structures, including genitourinary system; gut; and skin. Orthologous to several human genes including NT5C1B-RDH14 (NT5C1B-RDH14 readthrough); PARTICIPATES IN monoterpenoid biosynthetic pathway; niacin metabolic pathway; purine metabolic pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; folic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4921514H13Rik; 5'nucleotidase; AIRP; autoimmune infertility-related protein; CN-; CN-IB; cN1B; cytosolic 5'-nucleotidase 1B; cytosolic 5'-nucleotidase IB
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391210,419,971 - 10,440,174 (+)NCBIGRCm39mm39
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm381210,369,971 - 10,390,174 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)EnsemblGRCm38mm10GRCm38
MGSCv371210,376,777 - 10,396,980 (+)NCBIGRCm37mm9NCBIm37
MGSCv361210,396,052 - 10,416,178 (+)NCBImm8
Celera1210,746,216 - 10,766,635 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IDA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11690631   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21677750   PMID:21873635   PMID:24194600  
PMID:26917036  


Genomics

Comparative Map Data
Nt5c1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391210,419,971 - 10,440,174 (+)NCBIGRCm39mm39
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm381210,369,971 - 10,390,174 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)EnsemblGRCm38mm10GRCm38
MGSCv371210,376,777 - 10,396,980 (+)NCBIGRCm37mm9NCBIm37
MGSCv361210,396,052 - 10,416,178 (+)NCBImm8
Celera1210,746,216 - 10,766,635 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
NT5C1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl218,562,872 - 18,589,572 (-)EnsemblGRCh38hg38GRCh38
GRCh38218,562,871 - 18,589,569 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37218,744,137 - 18,770,835 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36218,607,618 - 18,634,319 (-)NCBINCBI36hg18NCBI36
Build 34218,665,764 - 18,692,466NCBI
Celera218,625,400 - 18,652,107 (-)NCBI
Cytogenetic Map2p24.2NCBI
HuRef218,519,305 - 18,546,012 (-)NCBIHuRef
CHM1_1218,673,544 - 18,700,251 (-)NCBICHM1_1
Nt5c1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2633,139,053 - 33,156,489 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl633,139,064 - 33,156,481 (+)Ensembl
Rnor_6.0636,089,450 - 36,106,843 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl636,089,433 - 36,106,849 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0645,851,446 - 45,868,643 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4633,849,953 - 33,867,624 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1633,852,905 - 33,870,576 (+)NCBI
Celera632,575,945 - 32,593,530 (+)NCBICelera
Cytogenetic Map6q14NCBI
Nt5c1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554691,287,455 - 1,300,716 (-)NCBIChiLan1.0ChiLan1.0
NT5C1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A18,669,699 - 18,696,299 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v02A18,542,502 - 18,569,114 (-)NCBIMhudiblu_PPA_v0panPan3
NT5C1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11713,848,736 - 13,870,933 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1713,800,670 - 13,822,708 (-)NCBI
ROS_Cfam_1.01713,992,351 - 14,014,391 (-)NCBI
UMICH_Zoey_3.11713,848,730 - 13,870,947 (-)NCBI
UNSW_CanFamBas_1.01713,854,259 - 13,876,305 (-)NCBI
UU_Cfam_GSD_1.01713,888,026 - 13,910,243 (-)NCBI
Nt5c1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629258,300,043 - 58,319,202 (-)NCBI
SpeTri2.0NW_00493649312,520,480 - 12,547,394 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NT5C1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11489,094,340 - 89,126,631 (+)NCBI
Vero_WHO_p1.0NW_02366604523,105,233 - 23,129,245 (-)NCBI
Nt5c1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247381,398,694 - 1,410,699 (-)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122368579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122368579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122368579Mouse
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122368579Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124612697Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124612697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127870733Mouse
4141112Tglq2a_mtriglyceride QTL 2a (mouse)Not determined12127870733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127870733Mouse
9850128Tglq5_mtriglyceride QTL 5 (mouse)Not determined12127870733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130383077Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132708755Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133380338Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1229013334290301Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12360000029700000Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12536844076984429Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12767315941673302Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12800000040000000Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12816257610401853Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12830244542302582Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12944100543441113Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12950000084100000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:408
Count of miRNA genes:267
Interacting mature miRNAs:304
Transcripts:ENSMUST00000002456, ENSMUST00000118657, ENSMUST00000143739, ENSMUST00000147323
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001310582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001373971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001373972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001373973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001373974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001373975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC157570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF356186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ295253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB573272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000002456   ⟹   ENSMUSP00000002456
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000118657   ⟹   ENSMUSP00000112694
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,979 - 10,440,173 (+)Ensembl
GRCm38.p6 Ensembl1210,369,979 - 10,390,173 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143739   ⟹   ENSMUSP00000123105
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,425,935 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,375,935 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147323   ⟹   ENSMUSP00000117869
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217944   ⟹   ENSMUSP00000151734
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218026   ⟹   ENSMUSP00000151761
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218148
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,425,053 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,375,053 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218287   ⟹   ENSMUSP00000151984
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218288   ⟹   ENSMUSP00000151785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,422,873 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,372,873 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218327   ⟹   ENSMUSP00000151288
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218339   ⟹   ENSMUSP00000151618
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218417   ⟹   ENSMUSP00000151433
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,994 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,994 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218551   ⟹   ENSMUSP00000151779
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219049   ⟹   ENSMUSP00000151771
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219292   ⟹   ENSMUSP00000151376
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219630   ⟹   ENSMUSP00000151584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,424,787 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,374,787 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219826   ⟹   ENSMUSP00000151401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,170 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,170 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220257   ⟹   ENSMUSP00000151627
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220611   ⟹   ENSMUSP00000152344
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,973 - 10,440,175 (+)Ensembl
GRCm38.p6 Ensembl1210,369,973 - 10,390,175 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223534   ⟹   ENSMUSP00000152838
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1210,419,979 - 10,440,173 (+)Ensembl
GRCm38.p6 Ensembl1210,369,979 - 10,390,173 (+)Ensembl
RefSeq Acc Id: NM_001310582   ⟹   NP_001297511
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,971 - 10,440,173 (+)NCBI
GRCm381210,369,971 - 10,390,173 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001373971   ⟹   NP_001360900
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NM_001373972   ⟹   NP_001360901
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NM_001373973   ⟹   NP_001360902
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NM_001373974   ⟹   NP_001360903
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NM_001373975   ⟹   NP_001360904
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NM_027588   ⟹   NP_081864
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,971 - 10,440,174 (+)NCBI
GRCm381210,369,971 - 10,390,174 (+)NCBI
MGSCv371210,376,777 - 10,396,980 (+)RGD
Celera1210,746,216 - 10,766,635 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_164200
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164201
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164202
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164203
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164204
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164205
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164206
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: NR_164207
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,973 - 10,440,170 (+)NCBI
GRCm381210,369,973 - 10,390,170 (+)NCBI
RefSeq Acc Id: XM_006515211   ⟹   XP_006515274
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391210,419,978 - 10,425,842 (+)NCBI
GRCm381210,369,978 - 10,375,843 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_081864   ⟸   NM_027588
- Peptide Label: isoform 1
- UniProtKB: Q91YE9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515274   ⟸   XM_006515211
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001297511   ⟸   NM_001310582
- Peptide Label: isoform 2
- UniProtKB: Q6P906 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001360900   ⟸   NM_001373971
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001360902   ⟸   NM_001373973
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001360901   ⟸   NM_001373972
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001360904   ⟸   NM_001373975
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001360903   ⟸   NM_001373974
- Peptide Label: isoform 6
RefSeq Acc Id: ENSMUSP00000151761   ⟸   ENSMUST00000218026
RefSeq Acc Id: ENSMUSP00000151618   ⟸   ENSMUST00000218339
RefSeq Acc Id: ENSMUSP00000151288   ⟸   ENSMUST00000218327
RefSeq Acc Id: ENSMUSP00000151984   ⟸   ENSMUST00000218287
RefSeq Acc Id: ENSMUSP00000151785   ⟸   ENSMUST00000218288
RefSeq Acc Id: ENSMUSP00000151779   ⟸   ENSMUST00000218551
RefSeq Acc Id: ENSMUSP00000151433   ⟸   ENSMUST00000218417
RefSeq Acc Id: ENSMUSP00000151734   ⟸   ENSMUST00000217944
RefSeq Acc Id: ENSMUSP00000152838   ⟸   ENSMUST00000223534
RefSeq Acc Id: ENSMUSP00000112694   ⟸   ENSMUST00000118657
RefSeq Acc Id: ENSMUSP00000123105   ⟸   ENSMUST00000143739
RefSeq Acc Id: ENSMUSP00000117869   ⟸   ENSMUST00000147323
RefSeq Acc Id: ENSMUSP00000151376   ⟸   ENSMUST00000219292
RefSeq Acc Id: ENSMUSP00000151771   ⟸   ENSMUST00000219049
RefSeq Acc Id: ENSMUSP00000151584   ⟸   ENSMUST00000219630
RefSeq Acc Id: ENSMUSP00000151401   ⟸   ENSMUST00000219826
RefSeq Acc Id: ENSMUSP00000002456   ⟸   ENSMUST00000002456
RefSeq Acc Id: ENSMUSP00000151627   ⟸   ENSMUST00000220257
RefSeq Acc Id: ENSMUSP00000152344   ⟸   ENSMUST00000220611

Promoters
RGD ID:8677906
Promoter ID:EPDNEW_M16984
Type:multiple initiation site
Name:Nt5c1b_1
Description:Mus musculus 5'-nucleotidase, cytosolic IB , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381210,369,973 - 10,370,033EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918131 AgrOrtholog
Ensembl Genes ENSMUSG00000020622 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000002456 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000112694 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000117869 UniProtKB/TrEMBL
  ENSMUSP00000123105 UniProtKB/TrEMBL
  ENSMUSP00000151288 UniProtKB/TrEMBL
  ENSMUSP00000151376 UniProtKB/TrEMBL
  ENSMUSP00000151401 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151433 UniProtKB/TrEMBL
  ENSMUSP00000151584 UniProtKB/TrEMBL
  ENSMUSP00000151618 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151627 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151734 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151761 UniProtKB/TrEMBL
  ENSMUSP00000151771 UniProtKB/TrEMBL
  ENSMUSP00000151779 UniProtKB/TrEMBL
  ENSMUSP00000151785 UniProtKB/TrEMBL
  ENSMUSP00000151984 UniProtKB/TrEMBL
  ENSMUSP00000152344 UniProtKB/TrEMBL
  ENSMUSP00000152838 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000002456 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000118657 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000143739 UniProtKB/TrEMBL
  ENSMUST00000147323 UniProtKB/TrEMBL
  ENSMUST00000217944 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218026 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218287 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218288 UniProtKB/TrEMBL
  ENSMUST00000218327 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218339 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218417 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000218551 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000219049 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000219292 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000219630 UniProtKB/TrEMBL
  ENSMUST00000219826 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000220257 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000220611 UniProtKB/TrEMBL
  ENSMUST00000223534 ENTREZGENE, UniProtKB/TrEMBL
InterPro 5-nucleotidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70881 UniProtKB/Swiss-Prot
MGD MGI:1918131 ENTREZGENE
NCBI Gene 70881 ENTREZGENE
PANTHER PTHR31367 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 5-nucleotidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nt5c1b PhenoGen
UniProt 5NT1B_MOUSE UniProtKB/Swiss-Prot
  A0A1W2P6J4_MOUSE UniProtKB/TrEMBL
  A0A1W2P6R5_MOUSE UniProtKB/TrEMBL
  A0A1W2P6X8_MOUSE UniProtKB/TrEMBL
  A0A1W2P710_MOUSE UniProtKB/TrEMBL
  A0A1W2P782_MOUSE UniProtKB/TrEMBL
  A0A1W2P7D6_MOUSE UniProtKB/TrEMBL
  A0A1W2P7E9_MOUSE UniProtKB/TrEMBL
  A0A1W2P7K9_MOUSE UniProtKB/TrEMBL
  A0A1W2P7P9_MOUSE UniProtKB/TrEMBL
  A0A1W2P7Q8_MOUSE UniProtKB/TrEMBL
  A0A1W2P7S7_MOUSE UniProtKB/TrEMBL
  A0A1W2P7V4_MOUSE UniProtKB/TrEMBL
  A0A1W2P893_MOUSE UniProtKB/TrEMBL
  A0A1Y7VJB2_MOUSE UniProtKB/TrEMBL
  A0A1Y7VK90_MOUSE UniProtKB/TrEMBL
  D3Z145_MOUSE UniProtKB/TrEMBL
  D6REF4_MOUSE UniProtKB/TrEMBL
  Q6P906 ENTREZGENE, UniProtKB/TrEMBL
  Q91YE9 ENTREZGENE
UniProt Secondary E9QNH2 UniProtKB/Swiss-Prot
  Q91Y48 UniProtKB/Swiss-Prot