Aplf (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 87,605,407 - 87,649,244 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 87,605,406 - 87,649,175 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 87,628,425 - 87,672,237 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 87,628,424 - 87,672,193 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 87,578,423 - 87,622,162 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 87,594,070 - 87,637,788 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 89,562,818 - 89,606,576 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | D1 | NCBI | | | | | cM Map | 6 | 38.52 | NCBI | | | | |
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APLF (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 68,467,585 - 68,580,162 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 68,467,572 - 68,655,862 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 68,694,717 - 68,807,294 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 68,548,246 - 68,660,798 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 68,606,392 - 68,718,944 | NCBI | | | | | Celera | 2 | 68,544,671 - 68,657,741 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p13.3 | NCBI | | | | | HuRef | 2 | 68,431,541 - 68,543,835 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 68,624,013 - 68,736,628 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 68,479,947 - 68,592,502 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Aplf (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 121,627,800 - 121,679,980 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 120,070,471 - 120,122,656 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 120,070,471 - 120,122,633 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 125,544,041 - 125,602,785 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 121,318,838 - 121,377,584 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 119,943,068 - 120,001,808 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 119,514,822 - 119,568,764 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 119,514,840 - 119,568,736 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 184,767,521 - 184,809,501 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 4 | 184,816,979 - 184,819,739 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 121,796,926 - 121,849,410 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 109,037,717 - 109,083,976 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q34 | NCBI | | | | |
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Aplf (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955424 | 16,336,228 - 16,448,766 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955424 | 16,338,546 - 16,449,074 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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APLF (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 12 | 57,836,254 - 57,947,492 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 57,838,385 - 57,951,427 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 68,509,314 - 68,629,192 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 69,632,459 - 69,744,611 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 69,632,459 - 69,744,611 (+) | Ensembl | panpan1.1 | | panPan2 | |
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APLF (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 10 | 67,454,500 - 67,522,659 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 67,454,356 - 67,521,761 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 67,344,455 - 67,413,321 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 68,473,928 - 68,543,022 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 68,473,934 - 68,546,201 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 68,156,771 - 68,224,622 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 68,455,171 - 68,524,808 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 68,750,534 - 68,819,077 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Aplf (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024406292 | 15,609,577 - 15,713,285 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936491 | 12,857,785 - 12,962,376 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936491 | 12,857,928 - 12,961,709 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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APLF (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 73,752,118 - 73,831,035 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 73,752,115 - 73,831,158 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 77,287,005 - 77,362,138 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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APLF (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 38,539,398 - 38,636,666 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 38,540,084 - 38,636,569 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 73,339,984 - 73,456,338 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aplf (Heterocephalus glaber - naked mole-rat) |
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