Dscc1 (DNA replication and sister chromatid cohesion 1) - Rat Genome Database

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Gene: Dscc1 (DNA replication and sister chromatid cohesion 1) Mus musculus
Analyze
Symbol: Dscc1
Name: DNA replication and sister chromatid cohesion 1
RGD ID: 1619130
MGI Page MGI
Description: Predicted to enable DNA binding activity. Predicted to contribute to DNA clamp loader activity and single-stranded DNA helicase activity. Predicted to be involved in maintenance of mitotic sister chromatid cohesion and regulation of DNA replication. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleoplasm. Predicted to be part of Ctf18 RFC-like complex and chromatin. Predicted to be active in chromosome, centromeric region. Is expressed in brain. Orthologous to human DSCC1 (DNA replication and sister chromatid cohesion 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2010006I05Rik; 2600005O03Rik; Dcc1; defective in sister chromatid cohesion 1 homolog; defective in sister chromatid cohesion protein 1 homolog; MGC151210; MGC151212; sister chromatid cohesion protein DCC1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391554,939,497 - 54,953,887 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1554,939,495 - 54,953,887 (-)EnsemblGRCm39 Ensembl
GRCm381555,076,101 - 55,090,491 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1555,076,099 - 55,090,491 (-)EnsemblGRCm38mm10GRCm38
MGSCv371554,907,656 - 54,922,033 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361554,906,184 - 54,920,561 (-)NCBIMGSCv36mm8
Celera1556,614,624 - 56,628,975 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1521.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
antirheumatic drug  (ISO)
atorvastatin calcium  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
dibutyl phthalate  (EXP,ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
fipronil  (ISO)
hydralazine  (ISO)
Lasiocarpine  (ISO)
lidocaine  (ISO)
lipopolysaccharide  (ISO)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
niclosamide  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
PCB138  (EXP)
pirinixic acid  (EXP)
potassium chromate  (ISO)
propanal  (ISO)
pyrvinium  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
succimer  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
trovafloxacin  (EXP)
tungsten  (EXP)
valproic acid  (ISO)
vincaleukoblastine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21440680   PMID:21677750  
PMID:21873635   PMID:28185240   PMID:30598549   PMID:30973865   PMID:32758484   PMID:33798452   PMID:34321999  


Genomics

Comparative Map Data
Dscc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391554,939,497 - 54,953,887 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1554,939,495 - 54,953,887 (-)EnsemblGRCm39 Ensembl
GRCm381555,076,101 - 55,090,491 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1555,076,099 - 55,090,491 (-)EnsemblGRCm38mm10GRCm38
MGSCv371554,907,656 - 54,922,033 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361554,906,184 - 54,920,561 (-)NCBIMGSCv36mm8
Celera1556,614,624 - 56,628,975 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1521.96NCBI
DSCC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388119,833,976 - 119,855,894 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8119,833,976 - 119,855,894 (-)EnsemblGRCh38hg38GRCh38
GRCh378120,846,216 - 120,868,134 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368120,915,397 - 120,937,330 (-)NCBINCBI36Build 36hg18NCBI36
Celera8117,035,242 - 117,057,287 (-)NCBICelera
Cytogenetic Map8q24.12NCBI
HuRef8116,167,062 - 116,189,042 (-)NCBIHuRef
CHM1_18120,887,012 - 120,908,997 (-)NCBICHM1_1
T2T-CHM13v2.08120,962,843 - 120,984,743 (-)NCBIT2T-CHM13v2.0
Dscc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8788,372,349 - 88,390,815 (-)NCBIGRCr8
mRatBN7.2786,482,588 - 86,498,212 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl786,482,588 - 86,498,212 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx788,365,742 - 88,381,402 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0790,566,951 - 90,582,603 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0790,372,417 - 90,388,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0794,759,076 - 94,774,787 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl794,758,800 - 94,774,569 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0795,399,906 - 95,415,618 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4791,602,671 - 91,618,122 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera783,276,534 - 83,292,120 (-)NCBICelera
Cytogenetic Map7q32NCBI
Dscc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541725,519,341 - 25,527,168 (-)NCBIChiLan1.0ChiLan1.0
DSCC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27137,259,612 - 137,284,164 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18112,771,509 - 112,793,572 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08116,524,249 - 116,546,178 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18119,272,490 - 119,294,342 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8119,272,490 - 119,294,342 (-)Ensemblpanpan1.1panPan2
DSCC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11318,825,522 - 18,841,905 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1318,825,844 - 18,841,873 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1318,838,548 - 18,854,898 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01319,154,668 - 19,171,101 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1319,154,990 - 19,171,749 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11318,881,784 - 18,898,141 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01318,981,280 - 18,997,700 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01319,212,008 - 19,228,492 (-)NCBIUU_Cfam_GSD_1.0
Dscc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530319,423,427 - 19,442,974 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647026,849,569 - 26,869,043 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647026,849,541 - 26,869,040 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DSCC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl419,161,226 - 19,178,568 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1419,161,063 - 19,180,002 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2420,185,806 - 20,200,160 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DSCC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18114,396,295 - 114,418,371 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8114,397,251 - 114,418,227 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603925,869,186 - 25,891,106 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dscc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476317,913,992 - 17,928,098 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476317,916,694 - 17,928,092 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dscc1
473 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:70
Interacting mature miRNAs:70
Transcripts:ENSMUST00000023059, ENSMUST00000110231, ENSMUST00000143523
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401902Sicd2_mseizure-induced cell death 2 (mouse)Not determined15347438971197538Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
26884387Skwq8_mskull length QTL 8, 10 week (mouse)15612948168271849Mouse
26884412Bzwq10_mbi-zygomatic width QTL 10, 10 week (mouse)15612948171471849Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
27095940Ulnl8_mulna length 8, 10 week (mouse)15722948155263396Mouse
27226759Feml17_mfemur length 17, 10 week (mouse)15762948155263396Mouse
27226755Feml22_mfemur length 22, 16 week (mouse)15762948159271849Mouse
4141192Ssrq2_mstress response QTL 2 (mouse)Not determined927302256186850Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
14928313Manh78_mmandible shape 78 (mouse)152148464155484641Mouse
12859289Criq3_mCitrobacter rodentium infection QTL 3 (mouse)152259376556593765Mouse
4142160Femwf10_mfemur work to failure 10 (mouse)Not determined2289301456893160Mouse
1301557Bbaa22_mB.burgdorferi-associated arthritis 22 (mouse)Not determined152446257258462805Mouse
1300967Bdt6_mbone density traits 6 (mouse)Not determined152529580659295928Mouse
4141409Radsvq1_mradiation sensitivity QTL 1 (mouse)Not determined2548497859484978Mouse
1300772Bglq16_mbody growth late QTL 16 (mouse)Not determined152631178060311880Mouse
1301345Bgeq14_mbody growth early QTL 14 (mouse)Not determined152631178060311880Mouse
1357514Mbis3_mMycobacterium bovis-induced systemic lupus erythematosus 3 (mouse)Not determined162631178060311880Mouse
1301406Egrd2_mearly growth rate (mouse)Not determined152631178060311880Mouse
27226800Scvln20_msacral vertebrae length 2, 16 week (mouse)152660008666371849Mouse
1301450Bpq6_mblood pressure QTL 6 (mouse)Not determined152828264662282739Mouse
1357512Bsbob5_mBSB obesity 5 (mouse)Not determined152828264662282739Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
26884452Sklq17_mskull length QTL 17, 16 week (mouse)153020014657963396Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
1300578Cd8ts3_mCD8 T cell subset 3 (mouse)Not determined153400469468004804Mouse
1301324Cdif_mcolor difference (mouse)Not determined153597590669976019Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
1301580Hrq2_mheart rate quantitative locus 2 (mouse)Not determined153910039573100593Mouse
1300949Lore5_mloss of righting induced by ethanol 5 (mouse)Not determined154001944158022297Mouse
4142459Lfnq3_mlung function QTL 3 (mouse)Not determined4017702272372580Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
26884420Cvht6_mcranial vault height 6, 10 week (mouse)154556339669171849Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1357661Eae2b_msusceptibility to experimental allergic encephalomyelitis 2b (mouse)Not determined155100469464944308Mouse
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000023059   ⟹   ENSMUSP00000023059
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1554,939,495 - 54,953,887 (-)Ensembl
GRCm38.p6 Ensembl1555,076,099 - 55,090,491 (-)Ensembl
RefSeq Acc Id: ENSMUST00000110231   ⟹   ENSMUSP00000105860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1554,939,498 - 54,953,876 (-)Ensembl
GRCm38.p6 Ensembl1555,076,102 - 55,090,480 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143523
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1554,947,115 - 54,951,153 (-)Ensembl
GRCm38.p6 Ensembl1555,083,719 - 55,087,757 (-)Ensembl
RefSeq Acc Id: NM_001355594   ⟹   NP_001342523
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391554,939,497 - 54,953,887 (-)NCBI
GRCm381555,076,101 - 55,090,491 (-)NCBI
Sequence:
RefSeq Acc Id: NM_183089   ⟹   NP_898912
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391554,939,497 - 54,953,887 (-)NCBI
GRCm381555,076,101 - 55,090,491 (-)NCBI
MGSCv371554,907,656 - 54,922,033 (-)RGD
Celera1556,614,624 - 56,628,975 (-)RGD
cM Map15 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_898912   ⟸   NM_183089
- Peptide Label: isoform 2
- UniProtKB: Q4FZL5 (UniProtKB/Swiss-Prot),   Q14AI0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001342523   ⟸   NM_001355594
- Peptide Label: isoform 1
- UniProtKB: D3YVY9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000105860   ⟸   ENSMUST00000110231
RefSeq Acc Id: ENSMUSP00000023059   ⟸   ENSMUST00000023059

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q14AI0-F1-model_v2 AlphaFold Q14AI0 1-399 view protein structure

Promoters
RGD ID:6825940
Promoter ID:MM_KWN:18449
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:ENSMUST00000110231,   OTTMUST00000056961
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361554,921,781 - 54,922,281 (-)MPROMDB
RGD ID:8683748
Promoter ID:EPDNEW_M19904
Type:initiation region
Name:Dscc1_1
Description:Mus musculus DNA replication and sister chromatid cohesion 1, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381555,090,480 - 55,090,540EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919357 AgrOrtholog
Ensembl Genes ENSMUSG00000022422 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023059 ENTREZGENE
  ENSMUST00000023059.13 UniProtKB/Swiss-Prot
  ENSMUST00000110231 ENTREZGENE
  ENSMUST00000110231.2 UniProtKB/TrEMBL
InterPro Dcc1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72107 UniProtKB/Swiss-Prot
MGD MGI:1919357 ENTREZGENE
NCBI Gene 72107 ENTREZGENE
PANTHER PTHR13395 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SISTER CHROMATID COHESION PROTEIN DCC1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Dcc1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dscc1 PhenoGen
UniProt D3YVY9 ENTREZGENE, UniProtKB/TrEMBL
  DCC1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q4FZL5 ENTREZGENE
  Q8C1P7_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q4FZL5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-29 Dscc1  DNA replication and sister chromatid cohesion 1    defective in sister chromatid cohesion 1 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED