Arhgef18 (rho/rac guanine nucleotide exchange factor (GEF) 18) - Rat Genome Database

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Gene: Arhgef18 (rho/rac guanine nucleotide exchange factor (GEF) 18) Mus musculus
Analyze
Symbol: Arhgef18
Name: rho/rac guanine nucleotide exchange factor (GEF) 18
RGD ID: 1619050
MGI Page MGI
Description: Predicted to have guanyl-nucleotide exchange factor activity. Predicted to be involved in several processes, including negative regulation of stress fiber assembly; protein localization to cell-cell junction; and regulation of Rho protein signal transduction. Predicted to localize to apical part of cell; cytosol; and plasma membrane. Is expressed in brain; dermis; epidermis; and metanephros. Human ortholog(s) of this gene implicated in retinitis pigmentosa. Orthologous to human ARHGEF18 (Rho/Rac guanine nucleotide exchange factor 18); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A430078G23Rik; AI467246; D030053O22Rik; hypothetical protein LOC319493; rho guanine nucleotide exchange factor 18; RIKEN cDNA A430078G23 gene; uncharacterized protein LOC319493
RGD Orthologs
Human
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3983,403,339 - 3,506,601 (+)NCBIGRCm39mm39
GRCm39 Ensembl83,403,415 - 3,506,601 (+)Ensembl
GRCm3883,353,338 - 3,456,601 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl83,353,415 - 3,456,601 (+)EnsemblGRCm38mm10GRCm38
MGSCv3783,393,008 - 3,456,600 (+)NCBIGRCm37mm9NCBIm37
MGSCv3683,393,008 - 3,456,600 (+)NCBImm8
Celera83,618,863 - 3,682,398 (+)NCBICelera
Cytogenetic Map8A1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12226475   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12799088   PMID:12904583  
PMID:14610273   PMID:15368895   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16959763   PMID:17967808   PMID:18799693   PMID:20810787   PMID:21081122   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:22006950   PMID:23648482   PMID:26410627   PMID:28536193   PMID:28671696   PMID:28706196   PMID:32325033  


Genomics

Comparative Map Data
Arhgef18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3983,403,339 - 3,506,601 (+)NCBIGRCm39mm39
GRCm39 Ensembl83,403,415 - 3,506,601 (+)Ensembl
GRCm3883,353,338 - 3,456,601 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl83,353,415 - 3,456,601 (+)EnsemblGRCm38mm10GRCm38
MGSCv3783,393,008 - 3,456,600 (+)NCBIGRCm37mm9NCBIm37
MGSCv3683,393,008 - 3,456,600 (+)NCBImm8
Celera83,618,863 - 3,682,398 (+)NCBICelera
Cytogenetic Map8A1.1NCBI
ARHGEF18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl197,348,937 - 7,472,485 (+)EnsemblGRCh38hg38GRCh38
GRCh38197,348,901 - 7,476,990 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37197,413,842 - 7,537,364 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,351,866 - 7,443,371 (+)NCBINCBI36hg18NCBI36
Build 34197,351,865 - 7,443,370NCBI
Celera197,331,115 - 7,409,876 (+)NCBI
Cytogenetic Map19p13.2NCBI
HuRef197,128,031 - 7,179,714 (+)NCBIHuRef
HuRef197,186,895 - 7,208,106 (+)NCBIHuRef
CHM1_1197,459,437 - 7,537,381 (+)NCBICHM1_1
Arhgef18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2121,395,035 - 1,503,081 (+)NCBI
Rnor_6.0 Ensembl121,889,331 - 1,998,127 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0121,889,252 - 1,998,128 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0124,056,145 - 4,161,174 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,712,198 - 2,855,137 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1122,713,997 - 2,740,671 (-)NCBI
Celera123,250,654 - 3,359,236 (+)NCBICelera
Cytogenetic Map12p12NCBI
Arhgef18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555631,746,838 - 1,772,772 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555631,745,202 - 1,823,411 (-)NCBIChiLan1.0ChiLan1.0
ARHGEF18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,196,670 - 52,281,491 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,201,007 - 52,283,000 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,001,555 - 52,087,194 (+)NCBI
ROS_Cfam_1.02052,726,796 - 52,812,572 (+)NCBI
UMICH_Zoey_3.12051,930,590 - 52,016,159 (+)NCBI
UNSW_CanFamBas_1.02052,374,118 - 52,459,723 (+)NCBI
UU_Cfam_GSD_1.02052,604,731 - 52,690,664 (+)NCBI
Arhgef18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118213,262,232 - 213,334,821 (-)NCBI
SpeTri2.0NW_0049365884,522,517 - 4,572,551 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGEF18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl271,651,100 - 71,747,410 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1271,651,096 - 71,747,513 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2272,176,541 - 72,198,429 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGEF18
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.166,846,595 - 6,972,701 (+)NCBI
ChlSab1.1 Ensembl66,869,318 - 6,973,989 (+)Ensembl
Vero_WHO_p1.0NW_023666081898,649 - 1,027,439 (-)NCBI
Arhgef18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624828529,529 - 604,996 (+)NCBI

Position Markers
AI467246  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3883,456,312 - 3,456,469UniSTSGRCm38
MGSCv3783,456,312 - 3,456,469UniSTSGRCm37
Celera83,682,110 - 3,682,267UniSTS
Cytogenetic Map8A1.1UniSTS
Whitehead/MRC_RH84.55UniSTS
UniSTS:224750  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3883,455,579 - 3,455,742UniSTSGRCm38
MGSCv3783,455,579 - 3,455,742UniSTSGRCm37
Celera83,681,377 - 3,681,540UniSTS
Cytogenetic Map8A1.1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124701082Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130397432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131723288Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1513
Count of miRNA genes:712
Interacting mature miRNAs:929
Transcripts:ENSMUST00000004684, ENSMUST00000130587, ENSMUST00000131773, ENSMUST00000145360, ENSMUST00000145394, ENSMUST00000156085
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001370668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC169677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02119233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI593550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM216300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM935742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ830835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA749983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000004684   ⟹   ENSMUSP00000004684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,393,038 - 3,456,601 (+)Ensembl
RefSeq Acc Id: ENSMUST00000098966   ⟹   ENSMUSP00000096566
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,353,437 - 3,390,299 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130587
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,393,073 - 3,429,271 (+)Ensembl
RefSeq Acc Id: ENSMUST00000131773
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,393,006 - 3,450,640 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145360
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,450,758 - 3,454,268 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145394   ⟹   ENSMUSP00000118410
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,393,073 - 3,429,639 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156085
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,437,011 - 3,456,600 (+)Ensembl
RefSeq Acc Id: ENSMUST00000207059
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,353,437 - 3,355,121 (+)Ensembl
RefSeq Acc Id: ENSMUST00000208363   ⟹   ENSMUSP00000146396
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,353,415 - 3,389,408 (+)Ensembl
RefSeq Acc Id: ENSMUST00000208845
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,353,460 - 3,386,724 (+)Ensembl
RefSeq Acc Id: ENSMUST00000238786   ⟹   ENSMUSP00000158946
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,426,700 - 3,454,540 (+)Ensembl
RefSeq Acc Id: ENSMUST00000238813   ⟹   ENSMUSP00000159070
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,360,852 - 3,390,299 (+)Ensembl
RefSeq Acc Id: ENSMUST00000239102   ⟹   ENSMUSP00000158969
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl83,353,437 - 3,456,601 (+)Ensembl
RefSeq Acc Id: NM_001370668   ⟹   NP_001357597
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,403,437 - 3,506,601 (+)NCBI
GRCm3883,353,437 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: NM_133962   ⟹   NP_598723
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,443,008 - 3,506,601 (+)NCBI
GRCm3883,393,008 - 3,456,601 (+)NCBI
MGSCv3783,393,008 - 3,456,600 (+)RGD
Celera83,618,863 - 3,682,398 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006508681   ⟹   XP_006508744
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,476,535 - 3,506,601 (+)NCBI
GRCm3883,426,538 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508682   ⟹   XP_006508745
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,442,949 - 3,506,601 (+)NCBI
GRCm3883,392,941 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312501   ⟹   XP_017167990
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,443,026 - 3,506,601 (+)NCBI
GRCm3883,393,025 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243209   ⟹   XP_030099069
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,410,844 - 3,506,601 (+)NCBI
GRCm3883,360,526 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243210   ⟹   XP_030099070
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,403,339 - 3,506,601 (+)NCBI
GRCm3883,353,338 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243211   ⟹   XP_030099071
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,414,694 - 3,506,601 (+)NCBI
GRCm3883,364,691 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243212   ⟹   XP_030099072
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,403,345 - 3,506,601 (+)NCBI
GRCm3883,353,343 - 3,456,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153699   ⟹   XP_036009592
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,443,026 - 3,506,601 (+)NCBI
RefSeq Acc Id: XM_036153700   ⟹   XP_036009593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3983,443,030 - 3,506,601 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_598723   ⟸   NM_133962
- Peptide Label: isoform 2
- UniProtKB: Q6P9R4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006508745   ⟸   XM_006508682
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006508744   ⟸   XM_006508681
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017167990   ⟸   XM_017312501
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_030099070   ⟸   XM_030243210
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030099072   ⟸   XM_030243212
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001357597   ⟸   NM_001370668
- Peptide Label: isoform 1
RefSeq Acc Id: XP_030099069   ⟸   XM_030243209
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030099071   ⟸   XM_030243211
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000118410   ⟸   ENSMUST00000145394
RefSeq Acc Id: ENSMUSP00000096566   ⟸   ENSMUST00000098966
RefSeq Acc Id: ENSMUSP00000158969   ⟸   ENSMUST00000239102
RefSeq Acc Id: ENSMUSP00000158946   ⟸   ENSMUST00000238786
RefSeq Acc Id: ENSMUSP00000159070   ⟸   ENSMUST00000238813
RefSeq Acc Id: ENSMUSP00000146396   ⟸   ENSMUST00000208363
RefSeq Acc Id: ENSMUSP00000004684   ⟸   ENSMUST00000004684
RefSeq Acc Id: XP_036009592   ⟸   XM_036153699
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036009593   ⟸   XM_036153700
- Peptide Label: isoform X5
Protein Domains
DH   PH

Promoters
RGD ID:6842783
Promoter ID:MM_KWN:53467
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000076126,   OTTMUST00000076127,   OTTMUST00000076129,   OTTMUST00000076130
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3683,392,744 - 3,393,244 (+)MPROMDB
RGD ID:8666313
Promoter ID:EPDNEW_M11188
Type:initiation region
Name:Arhgef18_1
Description:Mus musculus rho/rac guanine nucleotide exchange factor 18 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3883,393,038 - 3,393,098EPDNEW
RGD ID:6842784
Promoter ID:MM_KWN:53469
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000076131
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3683,450,191 - 3,451,082 (+)MPROMDB
RGD ID:6848254
Promoter ID:MM_ACW:46660
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Spleen
Transcripts:ARHGEF18.GSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3683,451,706 - 3,452,206 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2142567 AgrOrtholog
Ensembl Genes ENSMUSG00000004568 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000004684 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000096566 UniProtKB/TrEMBL
  ENSMUSP00000118410 UniProtKB/TrEMBL
  ENSMUSP00000146396 UniProtKB/TrEMBL
  ENSMUSP00000158946 UniProtKB/TrEMBL
  ENSMUSP00000158969 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000159070 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000004684 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000098966 UniProtKB/TrEMBL
  ENSMUST00000145394 UniProtKB/TrEMBL
  ENSMUST00000208363 UniProtKB/TrEMBL
  ENSMUST00000238786 UniProtKB/TrEMBL
  ENSMUST00000238813 UniProtKB/TrEMBL
  ENSMUST00000239102 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARHGEF18_PH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DBL_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:102098 UniProtKB/Swiss-Prot
MGD MGI:2142567 ENTREZGENE
NCBI Gene 102098 ENTREZGENE
Pfam PH_16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arhgef18 PhenoGen
PROSITE DH_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48065 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LHF8_MOUSE UniProtKB/TrEMBL
  A0A5F8MPF6_MOUSE UniProtKB/TrEMBL
  A0A5F8MPH6_MOUSE UniProtKB/TrEMBL
  A0A5F8MPQ3_MOUSE UniProtKB/TrEMBL
  ARHGI_MOUSE UniProtKB/Swiss-Prot
  D3YWI3_MOUSE UniProtKB/TrEMBL
  E9Q7Y4_MOUSE UniProtKB/TrEMBL
  Q3TQ64_MOUSE UniProtKB/TrEMBL
  Q3UU25_MOUSE UniProtKB/TrEMBL
  Q6P9R4 ENTREZGENE
UniProt Secondary E9QK59 UniProtKB/Swiss-Prot
  Q6A055 UniProtKB/Swiss-Prot
  Q8BYA4 UniProtKB/Swiss-Prot
  Q8K227 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-05-23 Arhgef18  rho/rac guanine nucleotide exchange factor (GEF) 18  A430078G23Rik  RIKEN cDNA A430078G23 gene  Data Merged 737654 PROVISIONAL