Mycbpap (MYCBP associated protein) - Rat Genome Database

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Gene: Mycbpap (MYCBP associated protein) Mus musculus
Analyze
Symbol: Mycbpap
Name: MYCBP associated protein
RGD ID: 1619049
MGI Page MGI
Description: Predicted to enable clathrin binding activity and phospholipid binding activity. Predicted to be involved in endocytosis. Predicted to act upstream of or within cell differentiation and spermatogenesis. Predicted to be located in cytoplasm. Predicted to be part of clathrin vesicle coat. Predicted to be active in endosome and plasma membrane. Is expressed in 4th ventricle lateral recess; choroid plexus; lateral ventricle choroid plexus; and pancreas epithelium. Orthologous to human MYCBPAP (MYCBP associated protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4932408B01Rik; AMA; AMAM-1; AMAP-1; AMY-1-binding protein 1; AMY1-associating protein 1; AW125474; MYCBP-associated protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391194,392,173 - 94,423,219 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1194,392,173 - 94,412,568 (-)EnsemblGRCm39 Ensembl
GRCm381194,501,347 - 94,532,386 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1194,501,347 - 94,521,742 (-)EnsemblGRCm38mm10GRCm38
MGSCv371194,362,661 - 94,382,816 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361194,317,440 - 94,328,723 (-)NCBIMGSCv36mm8
Celera11104,121,697 - 104,141,937 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1158.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:12151104   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:18554416  
PMID:21267068   PMID:21873635   PMID:31146259  


Genomics

Comparative Map Data
Mycbpap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391194,392,173 - 94,423,219 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1194,392,173 - 94,412,568 (-)EnsemblGRCm39 Ensembl
GRCm381194,501,347 - 94,532,386 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1194,501,347 - 94,521,742 (-)EnsemblGRCm38mm10GRCm38
MGSCv371194,362,661 - 94,382,816 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361194,317,440 - 94,328,723 (-)NCBIMGSCv36mm8
Celera11104,121,697 - 104,141,937 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1158.9NCBI
MYCBPAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381750,507,778 - 50,531,501 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1750,508,425 - 50,531,501 (+)EnsemblGRCh38hg38GRCh38
GRCh371748,585,800 - 48,608,862 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361745,940,811 - 45,963,861 (+)NCBINCBI36Build 36hg18NCBI36
Build 341745,940,950 - 45,963,860NCBI
Celera1745,047,042 - 45,070,225 (+)NCBICelera
Cytogenetic Map17q21.33NCBI
HuRef1743,953,661 - 43,976,856 (+)NCBIHuRef
CHM1_11748,649,570 - 48,672,741 (+)NCBICHM1_1
T2T-CHM13v2.01751,374,876 - 51,398,673 (+)NCBIT2T-CHM13v2.0
Mycbpap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81079,947,200 - 79,967,857 (-)NCBIGRCr8
mRatBN7.21079,450,319 - 79,470,977 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1079,450,324 - 79,470,828 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1084,055,039 - 84,075,913 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01083,553,153 - 83,574,023 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01079,067,908 - 79,088,799 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01082,232,105 - 82,253,649 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1082,232,107 - 82,252,963 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01082,051,974 - 82,072,848 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41083,140,371 - 83,143,078 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11083,154,740 - 83,157,448 (-)NCBI
Celera1078,240,754 - 78,259,087 (-)NCBICelera
Cytogenetic Map10q26NCBI
Mycbpap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545111,219,245 - 11,239,525 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545111,219,180 - 11,239,028 (-)NCBIChiLan1.0ChiLan1.0
MYCBPAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21966,700,019 - 66,722,665 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11771,507,208 - 71,529,886 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01744,602,693 - 44,625,330 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11749,476,443 - 49,499,102 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1749,476,361 - 49,499,101 (+)Ensemblpanpan1.1panPan2
SPATA20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1926,468,931 - 26,476,218 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl926,468,208 - 26,476,211 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha925,861,614 - 25,868,823 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0927,263,122 - 27,270,307 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl927,262,253 - 27,270,300 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1926,030,854 - 26,038,044 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0926,289,454 - 26,296,662 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0926,419,626 - 26,426,811 (+)NCBIUU_Cfam_GSD_1.0
Mycbpap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560225,868,116 - 25,889,410 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649011,185,801 - 11,199,709 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649011,185,730 - 11,206,563 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYCBPAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1226,791,942 - 26,811,610 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11226,791,710 - 26,811,617 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21226,924,026 - 26,952,337 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYCBPAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11642,806,386 - 42,832,528 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1642,806,371 - 42,829,785 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607713,522,842 - 13,546,862 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mycbpap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247956,402,809 - 6,417,494 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247956,400,154 - 6,418,052 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mycbpap
759 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:677
Count of miRNA genes:325
Interacting mature miRNAs:351
Transcripts:ENSMUST00000040692, ENSMUST00000093945, ENSMUST00000123496, ENSMUST00000139432, ENSMUST00000149872, ENSMUST00000151993
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117757387399377820Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179813759104502698Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
15092049Wsigrme3_mweek six growth rate, maternal effect 3 (mouse)118487732496629512Mouse
15092057Lgrme3_mlate growth rate, maternal effect 3 (mouse)118487732496629512Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187691198103274115Mouse
1301491Abbp4_mA/J and C57BL/6 blood pressure 4 (mouse)Not determined118869958899081597Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
13524529Bodwtq10_mbody wweight QTL 10 (mouse)119067951297699512Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
1300847Par1_mpulmonary adenoma resistance 1 (mouse)Not determined119406377996167421Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse

Markers in Region
AW125474  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381194,501,410 - 94,501,506UniSTSGRCm38
MGSCv371194,362,724 - 94,362,820UniSTSGRCm37
Celera11104,121,760 - 104,121,856UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map11DUniSTS
Whitehead/MRC_RH111257.04UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000040692   ⟹   ENSMUSP00000047579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,392,173 - 94,398,181 (-)Ensembl
GRCm38.p6 Ensembl1194,501,347 - 94,507,355 (-)Ensembl
RefSeq Acc Id: ENSMUST00000093945   ⟹   ENSMUSP00000091477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,392,173 - 94,412,568 (-)Ensembl
GRCm38.p6 Ensembl1194,501,347 - 94,521,742 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123496
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,392,173 - 94,412,568 (-)Ensembl
GRCm38.p6 Ensembl1194,501,347 - 94,521,742 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139432
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,392,173 - 94,394,397 (-)Ensembl
GRCm38.p6 Ensembl1194,501,347 - 94,503,571 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149872
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,393,832 - 94,394,384 (-)Ensembl
GRCm38.p6 Ensembl1194,503,006 - 94,503,558 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,398,526 - 94,400,987 (-)Ensembl
GRCm38.p6 Ensembl1194,507,700 - 94,510,161 (-)Ensembl
RefSeq Acc Id: ENSMUST00000239238   ⟹   ENSMUSP00000159222
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,392,173 - 94,412,382 (-)Ensembl
GRCm38.p6 Ensembl1194,501,347 - 94,521,556 (-)Ensembl
RefSeq Acc Id: NM_001415760   ⟹   NP_001402689
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,392,173 - 94,412,161 (-)NCBI
RefSeq Acc Id: NM_170671   ⟹   NP_733771
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,392,173 - 94,412,326 (-)NCBI
GRCm381194,501,347 - 94,521,502 (-)NCBI
MGSCv371194,362,661 - 94,382,816 (-)RGD
Celera11104,121,697 - 104,141,937 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531938   ⟹   XP_006532001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,392,173 - 94,423,219 (-)NCBI
GRCm381194,501,347 - 94,532,386 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531939   ⟹   XP_006532002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,394,102 - 94,423,216 (-)NCBI
GRCm381194,503,276 - 94,532,382 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949210
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,392,173 - 94,412,742 (-)NCBI
GRCm381194,501,347 - 94,521,523 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388315
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,392,173 - 94,423,216 (-)NCBI
GRCm381194,501,347 - 94,532,382 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_733771   ⟸   NM_170671
- Peptide Label: isoform 2
- Sequence:
RefSeq Acc Id: XP_006532001   ⟸   XM_006531938
- Peptide Label: isoform X1
- UniProtKB: Q8R2Q9 (UniProtKB/Swiss-Prot),   Q80YS8 (UniProtKB/Swiss-Prot),   Q5SUV2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532002   ⟸   XM_006531939
- Peptide Label: isoform X2
- UniProtKB: Q8R2Q9 (UniProtKB/Swiss-Prot),   Q80YS8 (UniProtKB/Swiss-Prot),   Q5SUV2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000091477   ⟸   ENSMUST00000093945
RefSeq Acc Id: ENSMUSP00000047579   ⟸   ENSMUST00000040692
RefSeq Acc Id: ENSMUSP00000159222   ⟸   ENSMUST00000239238
RefSeq Acc Id: NP_001402689   ⟸   NM_001415760
- Peptide Label: isoform 1
- UniProtKB: A0A668KL73 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SUV2-F1-model_v2 AlphaFold Q5SUV2 1-932 view protein structure

Promoters
RGD ID:8676216
Promoter ID:EPDNEW_M16137
Type:initiation region
Name:Mycbpap_2
Description:Mus musculus MYCBP associated protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16138  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381194,507,294 - 94,507,354EPDNEW
RGD ID:8676214
Promoter ID:EPDNEW_M16138
Type:initiation region
Name:Mycbpap_1
Description:Mus musculus MYCBP associated protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16137  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381194,521,500 - 94,521,560EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2388726 AgrOrtholog
Ensembl Genes ENSMUSG00000039110 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040692.9 UniProtKB/Swiss-Prot
  ENSMUST00000093945 ENTREZGENE
  ENSMUST00000093945.10 UniProtKB/Swiss-Prot
  ENSMUST00000123496 ENTREZGENE
  ENSMUST00000239238 ENTREZGENE
  ENSMUST00000239238.2 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYCBPAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:104601 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2388726 ENTREZGENE
NCBI Gene 104601 ENTREZGENE
PANTHER MYCBP-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot
  MYCBP-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot
  MYCBP-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  MYCBP-ASSOCIATED PROTEIN UniProtKB/TrEMBL
Pfam MYCBPAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mycbpap PhenoGen
UniProt A0A668KL73 ENTREZGENE, UniProtKB/TrEMBL
  MYBPP_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q80YS8 ENTREZGENE
  Q8CDK4_MOUSE UniProtKB/TrEMBL
  Q8R2Q9 ENTREZGENE
UniProt Secondary Q80YS8 UniProtKB/Swiss-Prot
  Q8R2Q9 UniProtKB/Swiss-Prot