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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | autism spectrum disorder | | ISO | RGD:2291813 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25290267 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | autism spectrum disorder | | ISO | RGD:2291813 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25290267 | |
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1. | Dawson MA and Kouzarides T, Cell. 2012 Jul 6;150(1):12-27. doi: 10.1016/j.cell.2012.06.013. |
2. | Delatte B, etal., EMBO J. 2014 Jun 2;33(11):1198-211. doi: 10.15252/embj.201488290. Epub 2014 May 13. |
3. | Long HK, etal., Biochem Soc Trans. 2013 Jun;41(3):727-40. doi: 10.1042/BST20130028. |
4. | RGD automated import pipeline |
5. | RGD automated import pipeline for gene-chemical interactions |
PMID:10349636 | PMID:10922068 | PMID:11042159 | PMID:11044607 | PMID:11076861 | PMID:11217851 | PMID:12466851 | PMID:12477932 | PMID:12693553 | PMID:15033168 | PMID:16141072 | PMID:16141073 |
PMID:19372391 | PMID:20639862 | PMID:21267068 | PMID:21321204 | PMID:21407207 | PMID:21778364 | PMID:21873635 | PMID:21892189 | PMID:22445327 | PMID:22569552 | PMID:22722204 | PMID:23028748 |
PMID:23151479 | PMID:23217707 | PMID:23353889 | PMID:23548903 | PMID:23643243 | PMID:23690950 | PMID:23920106 | PMID:23969834 | PMID:23998935 | PMID:24194590 | PMID:24279473 | PMID:24304661 |
PMID:24357321 | PMID:24480825 | PMID:24757058 | PMID:24838624 | PMID:25280220 | PMID:25344561 | PMID:25497087 | PMID:25557551 | PMID:25608811 | PMID:25640176 | PMID:25843715 | PMID:25915473 |
PMID:25982203 | PMID:26086966 | PMID:26199412 | PMID:26507142 | PMID:26576615 | PMID:26607761 | PMID:26711116 | PMID:26751286 | PMID:26774490 | PMID:26902115 | PMID:26903244 | PMID:26989192 |
PMID:27091986 | PMID:27184841 | PMID:27425624 | PMID:27627619 | PMID:27760115 | PMID:27869616 | PMID:27869820 | PMID:27880907 | PMID:27930333 | PMID:28276837 | PMID:28325772 | PMID:28504700 |
PMID:28614801 | PMID:28930672 | PMID:29048538 | PMID:29108636 | PMID:29158485 | PMID:29374200 | PMID:29795194 | PMID:30575719 | PMID:30726915 | PMID:30979904 | PMID:31028100 | PMID:31043609 |
PMID:31088968 | PMID:31120187 | PMID:31361780 | PMID:31371502 | PMID:31467060 | PMID:31541101 | PMID:31646359 | PMID:31807777 | PMID:31953394 | PMID:32325033 | PMID:32572241 |
Tet3 (Mus musculus - house mouse) |
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TET3 (Homo sapiens - human) |
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Tet3 (Rattus norvegicus - Norway rat) |
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Tet3 (Chinchilla lanigera - long-tailed chinchilla) |
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TET3 (Pan paniscus - bonobo/pygmy chimpanzee) |
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TET3 (Canis lupus familiaris - dog) |
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Tet3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TET3 (Sus scrofa - pig) |
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TET3 (Chlorocebus sabaeus - African green monkey) |
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Tet3 (Heterocephalus glaber - naked mole-rat) |
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Tet3 |
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D6UmiJ15 |
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D6UmiJ2 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001347313 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_183138 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006505775 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006505776 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006505777 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC090648 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AC159713 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK044758 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK046543 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK046552 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK046553 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK083576 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK084164 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK122274 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK136250 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC096437 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ423151 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HQ423152 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JX946278 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000056191 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000089622 ⟹ ENSMUSP00000087049 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000186548 ⟹ ENSMUSP00000139630 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000190295 ⟹ ENSMUSP00000139679 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000205921 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001347313 ⟹ NP_001334242 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_183138 ⟹ NP_898961 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006505775 ⟹ XP_006505838 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006505776 ⟹ XP_006505839 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006505777 ⟹ XP_006505840 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001334242 | (Get FASTA) | NCBI Sequence Viewer |
NP_898961 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006505838 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006505839 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006505840 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH96437 | (Get FASTA) | NCBI Sequence Viewer |
ADR57137 | (Get FASTA) | NCBI Sequence Viewer | |
ADR57138 | (Get FASTA) | NCBI Sequence Viewer | |
AGB05430 | (Get FASTA) | NCBI Sequence Viewer | |
BAC32068 | (Get FASTA) | NCBI Sequence Viewer | |
BAC32779 | (Get FASTA) | NCBI Sequence Viewer | |
BAC32784 | (Get FASTA) | NCBI Sequence Viewer | |
BAC32785 | (Get FASTA) | NCBI Sequence Viewer | |
BAC39131 | (Get FASTA) | NCBI Sequence Viewer | |
BAC65556 | (Get FASTA) | NCBI Sequence Viewer | |
Q8BG87 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_898961 ⟸ NM_183138 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q8BG87 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006505839 ⟸ XM_006505776 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8BG87 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006505838 ⟸ XM_006505775 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8BG87 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006505840 ⟸ XM_006505777 |
- Peptide Label: | isoform X2 |
- UniProtKB: | K9JH93 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001334242 ⟸ NM_001347313 |
- Peptide Label: | isoform 1 |
- UniProtKB: | Q8BG87 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | ENSMUSP00000139630 ⟸ ENSMUST00000186548 |
RefSeq Acc Id: | ENSMUSP00000139679 ⟸ ENSMUST00000190295 |
RefSeq Acc Id: | ENSMUSP00000087049 ⟸ ENSMUST00000089622 |
RGD ID: | 6839156 | ||||||||
Promoter ID: | MM_KWN:46609 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung, Spleen | ||||||||
Transcripts: | AK122274_TET3, UC009CNI.1 | ||||||||
Position: |
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RGD ID: | 6838999 | ||||||||
Promoter ID: | MM_KWN:46610 | ||||||||
Type: | Non-CpG | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | BoneMarrow_0Hour, Brain, Lung | ||||||||
Transcripts: | ENSMUST00000051321, UC009CNJ.1 | ||||||||
Position: |
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RGD ID: | 6839153 | ||||||||
Promoter ID: | MM_KWN:46611 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | BoneMarrow_0Hour, Brain, Kidney, Liver, Lung, Spleen | ||||||||
Transcripts: | UC009CNK.1 | ||||||||
Position: |
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RGD ID: | 6839009 | ||||||||
Promoter ID: | MM_KWN:46613 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||
Transcripts: | ENSMUST00000056191, NM_183138, NR_028382, UC009CNM.1 | ||||||||
Position: |
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RGD ID: | 6890162 | ||||||||
Promoter ID: | EPDNEW_M8532 | ||||||||
Type: | initiation region | ||||||||
Name: | Tet3_1 | ||||||||
Description: | Mus musculus tet methylcytosine dioxygenase 3 , transcript variant2, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M8533 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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RGD ID: | 6890214 | ||||||||
Promoter ID: | EPDNEW_M8533 | ||||||||
Type: | initiation region | ||||||||
Name: | Tet3_2 | ||||||||
Description: | Mus musculus tet methylcytosine dioxygenase 3 , transcript variant2, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M8532 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2446229 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000034832 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Protein | ENSMUSP00000087049 | ENTREZGENE, UniProtKB/TrEMBL |
ENSMUSP00000139630 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUSP00000139679 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000089622 | ENTREZGENE, UniProtKB/TrEMBL |
ENSMUST00000186548 | ENTREZGENE, UniProtKB/Swiss-Prot | |
ENSMUST00000190295 | UniProtKB/TrEMBL | |
InterPro | 2OGFeDO_noxygenase_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
TET1/2/3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_CXXC | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:194388 | UniProtKB/Swiss-Prot |
MGD | MGI:2446229 | ENTREZGENE |
NCBI Gene | 194388 | ENTREZGENE |
PANTHER | PTHR23358 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Pfam | Tet_JBP | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Tet3 | PhenoGen |
PROSITE | ZF_CXXC | UniProtKB/Swiss-Prot |
SMART | Tet_JBP | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A087WP90_MOUSE | UniProtKB/TrEMBL |
A0A5K1VVP6_MOUSE | UniProtKB/TrEMBL | |
K9JH93 | ENTREZGENE | |
Q80U11_MOUSE | UniProtKB/TrEMBL | |
Q8BG87 | ENTREZGENE | |
Q8BNB2_MOUSE | UniProtKB/TrEMBL | |
TET3_MOUSE | UniProtKB/Swiss-Prot | |
UniProt Secondary | K9JH93 | UniProtKB/Swiss-Prot |
L0HN04 | UniProtKB/Swiss-Prot | |
Q4VAD3 | UniProtKB/Swiss-Prot | |
Q8C8N8 | UniProtKB/Swiss-Prot | |
Q8CI60 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-03-31 | Tet3 | tet methylcytosine dioxygenase 3 | B430006D22Rik | RIKEN cDNA B430006D22 gene | Data Merged | 737654 | PROVISIONAL |
2012-02-14 | Tet3 | tet methylcytosine dioxygenase 3 | Tet3 | tet oncogene family member 3 | Symbol and/or name change | 5135510 | APPROVED |