Gm6740 (predicted gene 6740) - Rat Genome Database

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Gene: Gm6740 (predicted gene 6740) Mus musculus
Analyze
Symbol: Gm6740
Name: predicted gene 6740
RGD ID: 1618632
MGI Page MGI
Description:
Type: pseudo (Ensembl: TEC)
RefSeq Status: VALIDATED
Previously known as: EG627232
Related Functional Gene: Nrbf2  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391453,098,456 - 53,100,207 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1453,098,442 - 53,100,209 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1453,099,224 - 53,100,087 (-)EnsemblGRCm39 Ensembl
GRCm381452,860,999 - 52,862,750 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1452,860,985 - 52,862,752 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1452,861,767 - 52,862,630 (-)EnsemblGRCm38mm10GRCm38
MGSCv371453,480,674 - 53,482,425 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361451,782,940 - 51,784,705 (-)NCBIMGSCv36mm8
Cytogenetic Map14C2NCBI
cM Map1427.12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15489334   PMID:16141072  


Genomics

Variants

.
Variants in Gm6740
71 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142310Carg1_mCandida albicans resistance gene 1 (mouse)Not determined5138245954461655Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_007044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000100617
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1453,099,224 - 53,100,087 (-)Ensembl
GRCm38.p6 Ensembl1452,861,767 - 52,862,630 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228343
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1453,098,442 - 53,100,209 (-)Ensembl
GRCm38.p6 Ensembl1452,860,985 - 52,862,752 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000105061 Ensembl
  ENSMUSG00000115785 Ensembl, ENTREZGENE
MGD MGI:3643503 ENTREZGENE
NCBI Gene 627232 ENTREZGENE
PhenoGen Gm6740 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Gm6740  predicted gene 6740  EG627232  predicted gene, EG627232  Symbol and/or name change 5135510 APPROVED