Gm7398 (predicted gene 7398) - Rat Genome Database

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Gene: Gm7398 (predicted gene 7398) Mus musculus
Analyze
Symbol: Gm7398
Name: predicted gene 7398
RGD ID: 1618594
MGI Page MGI
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG664906
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X28,228,010 - 28,249,381 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX28,228,010 - 28,249,280 (+)EnsemblGRCm39 Ensembl
GRCm38X28,447,594 - 28,468,965 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX28,447,594 - 28,468,864 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X27,751,833 - 27,773,204 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X27,409,865 - 27,432,845 (+)NCBIMGSCv36mm8
Cytogenetic MapXA3.1NCBI
cM MapX18.68NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7398
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:50
Interacting mature miRNAs:50
Transcripts:ENSMUST00000178589
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide BX294668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000178589
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX28,228,010 - 28,249,280 (+)Ensembl
GRCm38.p6 EnsemblX28,447,594 - 28,468,864 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000095356 Ensembl, ENTREZGENE
MGD MGI:3647496 ENTREZGENE
NCBI Gene 664906 ENTREZGENE
PhenoGen Gm7398 PhenoGen