Gm7420 (predicted gene 7420) - Rat Genome Database

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Gene: Gm7420 (predicted gene 7420) Mus musculus
Analyze
Symbol: Gm7420
Name: predicted gene 7420
RGD ID: 1618573
MGI Page MGI
Description:
Type: gene (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG664949; predicted gene, EG664949
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39529,416,145 - 29,423,800 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl529,422,722 - 29,423,563 (+)EnsemblGRCm39 Ensembl
GRCm38529,217,631 - 29,218,802 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl529,217,724 - 29,218,565 (+)EnsemblGRCm38mm10GRCm38
MGSCv37529,540,907 - 29,545,957 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36529,545,154 - 29,550,204 (+)NCBIMGSCv36mm8
Celera526,734,015 - 26,735,036 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map514.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in Gm7420
313 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:53
Interacting mature miRNAs:53
Transcripts:ENSMUST00000162836
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12904958Gmmq8_mgastrocnemius muscle mass QTL 8 (mouse)5129421124Mouse
10401122Pgia41_mproteoglycan induced arthritis 41 (mouse)Not determined582314434823280Mouse
15039371Nmrs21_mNAFLD-associated magnetic resonance shift 21 (mouse)5350482337504823Mouse
1301806Actd2_mactivity-distance traveled 2 (mouse)Not determined5538452039384652Mouse
4141207Imrfq1_mimmune response to Factor IX QTL 1 (mouse)Not determined5812411742124239Mouse
7394748Mom5_mmodifier of Min 5 (mouse)Not determined5884767233475637Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
1357478Kdnw1_mkidney weight 1 (mouse)Not determined5891594940529869Mouse
14696730Kidlq1_mkidney weight, left QTL 1 (mouse)51356315247563152Mouse
1301685Estq2_mestradiol regulated response QTL 2 (mouse)Not determined51563408449634190Mouse
1300719Iba5_minduction of brown adipocytes 5 (mouse)Not determined52068699354687134Mouse
1301776Skts3_mskin tumor susceptibility 3 (mouse)Not determined52166729555667403Mouse
11537368Hmtb10_mhemostasis and thrombosis 10 (mouse)52210082354500318Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52210082364806579Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
1300701Cd8ts1_mCD8 T cell subset 1 (mouse)Not determined52721534861215451Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000162836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl529,422,722 - 29,423,563 (+)Ensembl
GRCm38.p6 Ensembl529,217,724 - 29,218,565 (+)Ensembl
RefSeq Acc Id: XR_004942731
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39529,416,145 - 29,423,800 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000089975 Ensembl
MGD MGI:3647909 ENTREZGENE
NCBI Gene 664949 ENTREZGENE
PhenoGen Gm7420 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-04 Gm7420  predicted gene 7420  EG664949  predicted gene, EG664949  Symbol and/or name change 5135510 APPROVED