Gene: Scp2-ps2 (sterol carrier protein 2, pseudogene 2) Mus musculus |
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 Analyze |
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Symbol: |
Scp2-ps2 |
Name: |
sterol carrier protein 2, pseudogene 2 |
RGD ID: |
1618408 |
MGI Page |
MGI |
Description: |
INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; clofibrate |
Type: |
pseudo
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RefSeq Status: |
INFERRED |
Related Functional Gene: |
Scp2
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Latest Assembly: |
GRCm38 - Mouse Genome Assembly GRCm38 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 123,136,573 - 123,137,051 (-) | NCBI | GRCm39 | | mm39 | | GRCm38 | 9 | 123,307,508 - 123,307,986 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 123,306,600 - 123,317,998 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 123,216,626 - 123,217,104 (-) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 9 | 123,156,206 - 123,156,684 (-) | NCBI | | | mm8 | | Celera | 9 | 123,759,960 - 123,760,438 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | F4 | NCBI | | | | | cM Map | 9 | 73.92 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
Position Markers
RH128646 |
Mouse Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCm38 | 9 | 123,307,307 - 123,307,516 | UniSTS | GRCm38 | GRCm38 | 4 | 108,044,549 - 108,044,758 | UniSTS | GRCm38 | MGSCv37 | 4 | 107,717,154 - 107,717,363 | UniSTS | GRCm37 | MGSCv37 | 9 | 123,216,425 - 123,216,634 | UniSTS | GRCm37 | Celera | 9 | 123,759,759 - 123,759,968 | UniSTS | | Celera | 4 | 106,394,172 - 106,394,381 | UniSTS | | Cytogenetic Map | 9 | F4 | UniSTS | | Cytogenetic Map | 4 | C7 | UniSTS | | cM Map | 9 | 70.5 | UniSTS | | cM Map | 4 | 52.0 | UniSTS | |
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RH125881 |
Mouse Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCm38 | 9 | 123,307,218 - 123,307,383 | UniSTS | GRCm38 | GRCm38 | 4 | 108,044,460 - 108,044,625 | UniSTS | GRCm38 | MGSCv37 | 4 | 107,717,065 - 107,717,230 | UniSTS | GRCm37 | MGSCv37 | 9 | 123,216,336 - 123,216,501 | UniSTS | GRCm37 | Celera | 9 | 123,759,670 - 123,759,835 | UniSTS | | Celera | 4 | 106,394,083 - 106,394,248 | UniSTS | | Cytogenetic Map | 9 | F4 | UniSTS | | Cytogenetic Map | 4 | C7 | UniSTS | | cM Map | 9 | 70.5 | UniSTS | | cM Map | 4 | 52.0 | UniSTS | |
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RH126486 |
Mouse Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCm38 | 9 | 123,307,234 - 123,307,478 | UniSTS | GRCm38 | GRCm38 | 4 | 108,044,476 - 108,044,720 | UniSTS | GRCm38 | MGSCv37 | 4 | 107,717,081 - 107,717,325 | UniSTS | GRCm37 | MGSCv37 | 9 | 123,216,352 - 123,216,596 | UniSTS | GRCm37 | Celera | 9 | 123,759,686 - 123,759,930 | UniSTS | | Celera | 4 | 106,394,099 - 106,394,343 | UniSTS | | Cytogenetic Map | 9 | F4 | UniSTS | | Cytogenetic Map | 4 | C7 | UniSTS | | cM Map | 9 | 70.5 | UniSTS | | cM Map | 4 | 52.0 | UniSTS | | Whitehead/MRC_RH | 4 | 1471.55 | UniSTS | |
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QTLs in Region (GRCm38)
1301649 | Psl1_m | promotion susceptibility QTL 1 (mouse) | | | Not determined | | 9 | 89412277 | 123412396 | Mouse | 18182932 | Metl3_m | metabolite locus 3, N-acetylglutamate (mouse) | | | | | 9 | 89563342 | 123563342 | Mouse | 12910770 | Splic1_m | spleen iron content 1 (mouse) | | | | | 9 | 91413879 | 124595110 | Mouse | 12910772 | Lvic6_m | liver iron content 6 (mouse) | | | | | 9 | 91413879 | 124595110 | Mouse | 12910773 | Splic3_m | spleen iron content 3 (mouse) | | | | | 9 | 91413879 | 124595110 | Mouse | 1558767 | Skmw11_m | skeletal muscle weight 11 (mouse) | | | Not determined | | 9 | 91641084 | 124595110 | Mouse | 13463474 | Hbbcq5_m | hemoglobin concentration QTL 5 (mouse) | | | | | 9 | 91641084 | 124595110 | Mouse | 13463475 | Hctq7_m | hematocrit QTL 7 (mouse) | | | | | 9 | 91641084 | 124595110 | Mouse | 13463477 | Rbc9_m | red blood cell count 9 (mouse) | | | | | 9 | 91641084 | 124595110 | Mouse | 13463478 | Mchq18_m | mean corpuscular hemoglobin QTL 18 (mouse) | | | | | 9 | 91641084 | 124595110 | Mouse | 13463480 | Mchcq2_m | mean corpuscular hemoglobin concentration QTL 2 (mouse) | | | | | 9 | 91641084 | 124595110 | Mouse | 12904937 | Edlmmq9_m | extensor digitorum longus muscle mass QTL 9 (mouse) | | | | | 9 | 91683173 | 124595110 | Mouse | 12904947 | Tammq7_m | tibialis anterior muscle mass QTL 7 (mouse) | | | | | 9 | 91683173 | 124595110 | Mouse | 12904961 | Gmmq7_m | gastrocnemius muscle mass QTL 7 (mouse) | | | | | 9 | 91683173 | 124595110 | Mouse | 1302001 | Bdln5_m | body length 5 (mouse) | | | Not determined | | 9 | 93762590 | 124595110 | Mouse | 1301484 | Bwq6_m | body weight (mouse) | | | Not determined | | 9 | 93762590 | 124595110 | Mouse | 14746992 | Manh67_m | mandible shape 67 (mouse) | | | | | 9 | 94036768 | 124595110 | Mouse | 11537364 | Cnes5_m | C. neoformans susceptibility locus 5 (mouse) | | | | | 9 | 96917590 | 124595110 | Mouse | 1301297 | Lcho1_m | liver cholesterol 1 (mouse) | | | Not determined | | 9 | 101060861 | 124595110 | Mouse | 1357627 | Tgq2_m | triglyceride QTL 2 (mouse) | | | Not determined | | 9 | 102000187 | 124595110 | Mouse | 1357648 | Obq18_m | obesity QTL 18 (mouse) | | | Not determined | | 9 | 102000187 | 124595110 | Mouse | 1301789 | Pbwg4_m | postnatal body weight growth 4 (mouse) | | | Not determined | | 9 | 103289445 | 124595110 | Mouse | 10412290 | Pvacm1l_m | plasma vascular cell adhesion molecule 1 levels (mouse) | | | Not determined | | 9 | 103289445 | 124595110 | Mouse | 12879896 | Berr3_m | berghei resistance locus 3 (mouse) | | | | | 9 | 103289445 | 124595110 | Mouse | |