Tpra1 (transmembrane protein, adipocyte asscociated 1) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Tpra1 (transmembrane protein, adipocyte asscociated 1) Mus musculus
Analyze
Symbol: Tpra1
Name: transmembrane protein, adipocyte asscociated 1
RGD ID: 1618402
MGI Page MGI
Description: Is expressed in brain. Orthologous to human TPRA1 (transmembrane protein adipocyte associated 1); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 40kD; 40kDa; G protein-coupled receptor 175; Gpr1; Gpr175; integral membrane protein GPR175; Tpr; Tpra40; transmembrane domain protein of 40 kDa regulated in adipocytes; transmembrane domain protein regulated in adipocytes 40 kDa; transmembrane protein adipocyte-associated 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,879,233 - 88,889,222 (+)NCBIGRCm39mm39
GRCm39 Ensembl688,879,233 - 88,889,220 (+)Ensembl
GRCm38688,902,251 - 88,912,240 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,902,251 - 88,912,238 (+)EnsemblGRCm38mm10GRCm38
MGSCv37688,852,245 - 88,862,234 (+)NCBIGRCm37mm9NCBIm37
MGSCv36688,868,144 - 88,877,870 (+)NCBImm8
Celera690,840,223 - 90,850,199 (+)NCBICelera
Cytogenetic Map6D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10342878   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12679517   PMID:14610273  
PMID:15489334   PMID:15782199   PMID:15840001   PMID:15953540   PMID:16141072   PMID:16141073   PMID:16537572   PMID:17273929   PMID:18459117   PMID:18799693   PMID:21677750  


Genomics

Comparative Map Data
Tpra1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39688,879,233 - 88,889,222 (+)NCBIGRCm39mm39
GRCm39 Ensembl688,879,233 - 88,889,220 (+)Ensembl
GRCm38688,902,251 - 88,912,240 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl688,902,251 - 88,912,238 (+)EnsemblGRCm38mm10GRCm38
MGSCv37688,852,245 - 88,862,234 (+)NCBIGRCm37mm9NCBIm37
MGSCv36688,868,144 - 88,877,870 (+)NCBImm8
Celera690,840,223 - 90,850,199 (+)NCBICelera
Cytogenetic Map6D1NCBI
TPRA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3127,571,232 - 127,598,267 (-)EnsemblGRCh38hg38GRCh38
GRCh383127,571,232 - 127,598,231 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373127,290,075 - 127,317,074 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363128,774,606 - 128,781,970 (-)NCBINCBI36hg18NCBI36
Build 343128,774,612 - 128,781,978NCBI
Celera3125,718,390 - 125,736,050 (-)NCBI
Cytogenetic Map3q21.3NCBI
HuRef3124,672,244 - 124,689,648 (-)NCBIHuRef
CHM1_13127,255,253 - 127,272,919 (-)NCBICHM1_1
Tpra1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24121,364,093 - 121,375,275 (+)NCBI
Rnor_6.0 Ensembl4120,843,453 - 120,854,529 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04120,843,374 - 120,854,534 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04186,084,056 - 186,095,215 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44123,001,474 - 123,006,178 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14123,245,954 - 123,248,969 (+)NCBI
Celera4110,317,449 - 110,328,484 (+)NCBICelera
Cytogenetic Map4q34NCBI
Tpra1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542916,032,409 - 16,042,177 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542916,032,247 - 16,041,793 (+)NCBIChiLan1.0ChiLan1.0
TPRA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13131,926,481 - 131,950,817 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3131,926,486 - 131,943,709 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03124,618,386 - 124,636,075 (-)NCBIMhudiblu_PPA_v0panPan3
TPRA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl201,653,855 - 1,671,666 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1201,661,980 - 1,680,111 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tpra1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936798770,836 - 777,802 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TPRA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1372,650,669 - 72,666,989 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11372,661,580 - 72,666,995 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21379,984,369 - 79,989,520 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TPRA1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12253,447,383 - 53,467,709 (+)NCBI
ChlSab1.1 Ensembl2253,449,903 - 53,468,442 (+)Ensembl
Tpra1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624961505,299 - 519,071 (-)NCBI

Position Markers
Gpr175  
Mouse AssemblyChrPosition (strand)SourceJBrowse
cM Map6 UniSTS
RH130646  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38688,911,986 - 88,912,192UniSTSGRCm38
MGSCv37688,861,980 - 88,862,186UniSTSGRCm37
Celera690,849,945 - 90,850,151UniSTS
Cytogenetic Map6D2UniSTS
Tpra1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3181
Count of miRNA genes:738
Interacting mature miRNAs:954
Transcripts:ENSMUST00000055022, ENSMUST00000123257, ENSMUST00000128171, ENSMUST00000128790, ENSMUST00000129979, ENSMUST00000135778, ENSMUST00000138415, ENSMUST00000141163, ENSMUST00000144405, ENSMUST00000148874, ENSMUST00000150236, ENSMUST00000151379, ENSMUST00000152045, ENSMUST00000152585, ENSMUST00000153874, ENSMUST00000153885
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF051098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY255531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY551850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000055022   ⟹   ENSMUSP00000063042
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,251 - 88,912,231 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123257   ⟹   ENSMUSP00000145118
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,907,989 - 88,911,101 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128171
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,908,188 - 88,909,527 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128790   ⟹   ENSMUSP00000145116
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,905,975 - 88,910,820 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129979   ⟹   ENSMUSP00000145368
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,907,975 - 88,912,238 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135778
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,337 - 88,910,363 (+)Ensembl
RefSeq Acc Id: ENSMUST00000138415
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,299 - 88,909,414 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141163
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,317 - 88,906,564 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144405
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,905,634 - 88,909,301 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148874
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,910,158 - 88,910,949 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150236   ⟹   ENSMUSP00000145098
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,907,975 - 88,911,984 (+)Ensembl
RefSeq Acc Id: ENSMUST00000151379
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,905,955 - 88,907,760 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152045
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,910,223 - 88,910,498 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152585   ⟹   ENSMUSP00000144812
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,906,041 - 88,910,648 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153874   ⟹   ENSMUSP00000118017
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,342 - 88,910,227 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153885
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,908,188 - 88,909,543 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203155
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,910,599 - 88,911,755 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203185   ⟹   ENSMUSP00000145168
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,905,946 - 88,912,231 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203345   ⟹   ENSMUSP00000144846
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,453 - 88,912,231 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203648   ⟹   ENSMUSP00000145404
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,905,957 - 88,911,747 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203694   ⟹   ENSMUSP00000144931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,352 - 88,910,211 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,317 - 88,906,097 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204765   ⟹   ENSMUSP00000145050
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl688,902,333 - 88,912,231 (+)Ensembl
RefSeq Acc Id: NM_011906   ⟹   NP_036036
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,233 - 88,889,222 (+)NCBI
GRCm38688,902,251 - 88,912,240 (+)ENTREZGENE
MGSCv37688,852,245 - 88,862,234 (+)RGD
Celera690,840,223 - 90,850,199 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506061   ⟹   XP_006506124
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,505 - 88,889,216 (+)NCBI
GRCm38688,902,721 - 88,912,231 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506062   ⟹   XP_006506125
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,238 - 88,889,216 (+)NCBI
GRCm38688,902,256 - 88,912,232 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506063   ⟹   XP_006506126
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,238 - 88,889,216 (+)NCBI
GRCm38688,902,256 - 88,912,232 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506064   ⟹   XP_006506127
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,238 - 88,889,216 (+)NCBI
GRCm38688,902,256 - 88,912,232 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036166106   ⟹   XP_036021999
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,238 - 88,889,216 (+)NCBI
RefSeq Acc Id: XM_036166107   ⟹   XP_036022000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,238 - 88,889,216 (+)NCBI
RefSeq Acc Id: XR_377450
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39688,879,236 - 88,889,216 (+)NCBI
GRCm38688,902,256 - 88,912,234 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_036036   ⟸   NM_011906
- UniProtKB: Q99MU1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506126   ⟸   XM_006506063
- Peptide Label: isoform X1
- UniProtKB: Q99MU1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506125   ⟸   XM_006506062
- Peptide Label: isoform X1
- UniProtKB: Q99MU1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506127   ⟸   XM_006506064
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006506124   ⟸   XM_006506061
- Peptide Label: isoform X1
- UniProtKB: Q99MU1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000145098   ⟸   ENSMUST00000150236
RefSeq Acc Id: ENSMUSP00000144931   ⟸   ENSMUST00000203694
RefSeq Acc Id: ENSMUSP00000145404   ⟸   ENSMUST00000203648
RefSeq Acc Id: ENSMUSP00000145168   ⟸   ENSMUST00000203185
RefSeq Acc Id: ENSMUSP00000144846   ⟸   ENSMUST00000203345
RefSeq Acc Id: ENSMUSP00000144812   ⟸   ENSMUST00000152585
RefSeq Acc Id: ENSMUSP00000145050   ⟸   ENSMUST00000204765
RefSeq Acc Id: ENSMUSP00000145368   ⟸   ENSMUST00000129979
RefSeq Acc Id: ENSMUSP00000145116   ⟸   ENSMUST00000128790
RefSeq Acc Id: ENSMUSP00000118017   ⟸   ENSMUST00000153874
RefSeq Acc Id: ENSMUSP00000063042   ⟸   ENSMUST00000055022
RefSeq Acc Id: ENSMUSP00000145118   ⟸   ENSMUST00000123257
RefSeq Acc Id: XP_036021999   ⟸   XM_036166106
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036022000   ⟸   XM_036166107
- Peptide Label: isoform X1

Promoters
RGD ID:6839417
Promoter ID:MM_KWN:46836
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_011906,   OTTMUST00000058700,   OTTMUST00000058701,   OTTMUST00000058702,   OTTMUST00000058704
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,852,176 - 88,852,737 (+)MPROMDB
RGD ID:6839414
Promoter ID:MM_KWN:46837
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000058703,   OTTMUST00000058705,   OTTMUST00000058720,   OTTMUST00000058722,   UC009CVZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,854,636 - 88,855,136 (+)MPROMDB
RGD ID:6839413
Promoter ID:MM_KWN:46838
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000058696,   OTTMUST00000058697,   OTTMUST00000058698,   OTTMUST00000058699,   OTTMUST00000058706,   OTTMUST00000058721
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,857,076 - 88,857,576 (+)MPROMDB
RGD ID:6839423
Promoter ID:MM_KWN:46839
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Kidney,   Lung
Transcripts:OTTMUST00000058719
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36688,859,286 - 88,860,277 (+)MPROMDB
RGD ID:6890404
Promoter ID:EPDNEW_M8646
Type:initiation region
Name:Tpra1_1
Description:Mus musculus transmembrane protein, adipocyte asscociated 1 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38688,902,317 - 88,902,377EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1345190 AgrOrtholog
Ensembl Genes ENSMUSG00000002871 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000063042 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000118017 UniProtKB/TrEMBL
  ENSMUSP00000144812 UniProtKB/TrEMBL
  ENSMUSP00000144846 UniProtKB/TrEMBL
  ENSMUSP00000144931 UniProtKB/TrEMBL
  ENSMUSP00000145050 UniProtKB/Swiss-Prot
  ENSMUSP00000145098 UniProtKB/TrEMBL
  ENSMUSP00000145116 UniProtKB/TrEMBL
  ENSMUSP00000145118 UniProtKB/TrEMBL
  ENSMUSP00000145168 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000145368 UniProtKB/TrEMBL
  ENSMUSP00000145404 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000055022 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000123257 UniProtKB/TrEMBL
  ENSMUST00000128790 UniProtKB/TrEMBL
  ENSMUST00000129979 UniProtKB/TrEMBL
  ENSMUST00000150236 UniProtKB/TrEMBL
  ENSMUST00000152585 UniProtKB/TrEMBL
  ENSMUST00000153874 UniProtKB/TrEMBL
  ENSMUST00000203185 UniProtKB/Swiss-Prot
  ENSMUST00000203345 UniProtKB/TrEMBL
  ENSMUST00000203648 UniProtKB/TrEMBL
  ENSMUST00000203694 UniProtKB/TrEMBL
  ENSMUST00000204765 UniProtKB/Swiss-Prot
InterPro TPRA1/CAND2/CAND8 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
KEGG Report mmu:24100 UniProtKB/Swiss-Prot
MGD MGI:1345190 ENTREZGENE
NCBI Gene 24100 ENTREZGENE
PANTHER PTHR15876 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Tmemb_40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tpra1 PhenoGen
UniProt A0A0N4SUT1_MOUSE UniProtKB/TrEMBL
  A0A0N4SUW2_MOUSE UniProtKB/TrEMBL
  A0A0N4SV31_MOUSE UniProtKB/TrEMBL
  A0A0N4SVH0_MOUSE UniProtKB/TrEMBL
  A0A0N4SVI2_MOUSE UniProtKB/TrEMBL
  A0A0N4SVI3_MOUSE UniProtKB/TrEMBL
  A0A0N4SW46_MOUSE UniProtKB/TrEMBL
  A0A0N4SW75_MOUSE UniProtKB/TrEMBL
  D3Z018_MOUSE UniProtKB/TrEMBL
  Q99MU1 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q80UD9 UniProtKB/Swiss-Prot
  Q8C240 UniProtKB/Swiss-Prot
  Q91Z36 UniProtKB/Swiss-Prot
  Q9Z112 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Tpra1  transmembrane protein, adipocyte asscociated 1  Gpr175  G protein-coupled receptor 175  Symbol and/or name change 5135510 APPROVED