Sptssa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 12 | 54,692,159 - 54,703,357 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 54,692,177 - 54,703,358 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 54,645,374 - 54,656,572 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 54,645,392 - 54,656,573 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 55,746,361 - 55,757,559 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 55,567,018 - 55,578,124 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 55,961,951 - 55,973,156 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | C1 | NCBI | | | | | cM Map | 12 | 23.46 | NCBI | | | | |
|
SPTSSA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 14 | 34,432,788 - 34,462,240 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 34,432,788 - 34,462,240 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 34,901,994 - 34,931,446 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 33,971,895 - 34,001,219 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 33,971,904 - 34,001,313 | NCBI | | | | | Celera | 14 | 14,767,183 - 14,796,506 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q13.1 | NCBI | | | | | HuRef | 14 | 15,020,179 - 15,049,457 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 34,900,608 - 34,930,130 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 28,631,319 - 28,661,012 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Sptssa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 77,879,931 - 77,891,344 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 72,144,714 - 72,156,130 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 72,144,714 - 72,156,214 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 72,565,588 - 72,577,037 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 72,872,259 - 72,883,710 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 72,302,687 - 72,314,091 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 75,540,132 - 75,551,545 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 75,540,174 - 75,551,625 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 85,080,132 - 85,091,844 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 74,962,387 - 74,973,800 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 6 | 70,991,533 - 71,002,947 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q23 | NCBI | | | | |
|
Sptssa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955409 | 26,460,208 - 26,460,854 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SPTSSA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 15 | 35,751,896 - 35,779,566 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 34,968,397 - 34,996,068 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 15,190,833 - 15,219,882 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
|
LOC102151865 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 8 | 13,265,424 - 13,339,212 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 13,077,984 - 13,151,811 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 13,284,591 - 13,447,278 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 8 | 12,965,994 - 13,127,949 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 13,049,110 - 13,211,027 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 13,427,103 - 13,501,270 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Sptssa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 45,211,157 - 45,233,059 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936494 | 8,716,829 - 8,739,066 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936494 | 8,717,821 - 8,738,923 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SPTSSA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 65,302,858 - 65,326,728 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 65,302,887 - 65,325,877 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 70,090,613 - 70,113,604 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
SPTSSA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 11,264,578 - 11,298,816 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 11,266,343 - 11,298,668 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 201,739 - 236,078 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Sptssa (Heterocephalus glaber - naked mole-rat) |
|