Kank1 (KN motif and ankyrin repeat domains 1) - Rat Genome Database

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Gene: Kank1 (KN motif and ankyrin repeat domains 1) Mus musculus
Analyze
Symbol: Kank1
Name: KN motif and ankyrin repeat domains 1
RGD ID: 1618240
MGI Page MGI
Description: Predicted to enable beta-catenin binding activity. Predicted to be involved in several processes, including negative regulation of cellular component organization; negative regulation of substrate adhesion-dependent cell spreading; and regulation of signal transduction. Predicted to be located in nucleus and ruffle membrane. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including central nervous system; craniocervical region bone; limb; metanephros; and sensory organ. Human ortholog(s) of this gene implicated in spastic quadriplegic cerebral palsy 2. Orthologous to human KANK1 (KN motif and ankyrin repeat domains 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A930031B09Rik; Ankr; Ankrd15; ankyrin repeat domain 15; AU015049; AW121052; D330024H06Rik; KN motif and ankyrin repeat domain-containing protein 1; MGC90826; mKIAA0172
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391925,214,146 - 25,411,861 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1925,214,339 - 25,411,860 (+)EnsemblGRCm39 Ensembl
GRCm381925,236,732 - 25,434,498 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1925,236,975 - 25,434,496 (+)EnsemblGRCm38mm10GRCm38
MGSCv371925,311,692 - 25,508,986 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361925,304,299 - 25,501,593 (+)NCBIMGSCv36mm8
Celera1926,023,481 - 26,224,832 (+)NCBICelera
Cytogenetic Map19BNCBI
cM Map1920.33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
caffeine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlordecone  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
Cuprizon  (ISO)
cycloheximide  (ISO)
cyclosporin A  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
flutamide  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
glafenine  (ISO)
hydralazine  (ISO)
lead diacetate  (EXP)
lead(0)  (EXP)
lipopolysaccharide  (ISO)
menadione  (ISO)
methapyrilene  (ISO)
mitomycin C  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
pirinixic acid  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (EXP)
valproic acid  (EXP,ISO)
vincaleukoblastine  (ISO)
vinclozolin  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. A novel ankyrin repeat-containing gene (Kank) located at 9p24 is a growth suppressor of renal cell carcinoma. Sarkar S, etal., J Biol Chem. 2002 Sep 27;277(39):36585-91. Epub 2002 Jul 19.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12693553   PMID:14610273  
PMID:15031102   PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17967808   PMID:17996375   PMID:18458160   PMID:20059953   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:24146773   PMID:25920569   PMID:29158259   PMID:29217769   PMID:33253712   PMID:33567267   PMID:37895296  


Genomics

Comparative Map Data
Kank1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391925,214,146 - 25,411,861 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1925,214,339 - 25,411,860 (+)EnsemblGRCm39 Ensembl
GRCm381925,236,732 - 25,434,498 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1925,236,975 - 25,434,496 (+)EnsemblGRCm38mm10GRCm38
MGSCv371925,311,692 - 25,508,986 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361925,304,299 - 25,501,593 (+)NCBIMGSCv36mm8
Celera1926,023,481 - 26,224,832 (+)NCBICelera
Cytogenetic Map19BNCBI
cM Map1920.33NCBI
KANK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389470,295 - 746,103 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9470,291 - 746,105 (+)EnsemblGRCh38hg38GRCh38
GRCh379470,295 - 746,103 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369494,703 - 736,103 (+)NCBINCBI36Build 36hg18NCBI36
Celera9421,697 - 662,617 (+)NCBICelera
Cytogenetic Map9p24.3NCBI
HuRef9422,063 - 697,776 (+)NCBIHuRef
CHM1_19469,730 - 745,633 (+)NCBICHM1_1
T2T-CHM13v2.09469,752 - 745,414 (+)NCBIT2T-CHM13v2.0
Kank1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81232,381,720 - 232,500,834 (+)NCBIGRCr8
mRatBN7.21222,877,962 - 223,074,514 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1222,877,622 - 223,074,514 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1231,405,112 - 231,522,079 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01238,335,228 - 238,452,173 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01231,155,957 - 231,272,929 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01243,201,073 - 243,398,531 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1243,276,403 - 243,398,536 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01250,464,788 - 250,659,569 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41228,748,121 - 228,868,261 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11228,953,941 - 229,032,270 (+)NCBI
Celera1220,157,106 - 220,275,618 (+)NCBICelera
Cytogenetic Map1q51NCBI
Kank1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554345,191,846 - 5,279,739 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554345,247,278 - 5,279,043 (+)NCBIChiLan1.0ChiLan1.0
KANK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211123,836,701 - 124,113,523 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19123,842,644 - 124,119,465 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09550,713 - 556,230 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19454,147 - 458,576 (+)NCBIpanpan1.1PanPan1.1panPan2
KANK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1189,446,340 - 89,618,716 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl189,480,399 - 89,618,143 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha189,881,037 - 90,088,470 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0189,960,930 - 90,168,925 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl189,960,543 - 90,168,925 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1189,606,742 - 89,814,600 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0189,319,249 - 89,527,336 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0190,086,221 - 90,294,502 (+)NCBIUU_Cfam_GSD_1.0
Kank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947136,917,110 - 137,047,718 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365034,122,204 - 4,246,680 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365034,125,302 - 4,255,880 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KANK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1221,015,046 - 221,078,245 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11221,015,042 - 221,218,875 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21247,300,636 - 247,477,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KANK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11278,775,214 - 79,015,538 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1278,774,788 - 78,973,851 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603867,163,360 - 67,410,180 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kank1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247365,379,728 - 5,444,234 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247365,260,761 - 5,444,234 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kank1
8472 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:758
Count of miRNA genes:491
Interacting mature miRNAs:571
Transcripts:ENSMUST00000049400, ENSMUST00000137260, ENSMUST00000146647, ENSMUST00000155788
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
12801464Rta2_mretinal aging 2 (mouse)141230287425302874Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
1301197Tlyr1_mthymic lymphoma resistance 1 (mouse)Not determined192053952825313796Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
1357596Tgct3_mtesticular germ cell tumor 3 (mouse)Not determined192198409132912719Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1302123Tlsr8_mthymic lymphoma suppressor region 8 (mouse)Not determined192513600242388916Mouse

Markers in Region
AU015049  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381925,434,278 - 25,434,425UniSTSGRCm38
MGSCv371925,508,768 - 25,508,915UniSTSGRCm37
Celera1926,224,602 - 26,224,749UniSTS
Cytogenetic Map19BUniSTS
Whitehead/MRC_RH19261.69UniSTS
Whitehead/MRC_RH19259.99UniSTS
28.MHAa58c4.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371925,334,368 - 25,334,535UniSTSGRCm37
Celera1926,052,046 - 26,052,213UniSTS
Celera1926,050,966 - 26,051,133UniSTS
Whitehead_YAC19 UniSTS
RH124809  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381925,350,271 - 25,350,351UniSTSGRCm38
MGSCv371925,424,761 - 25,424,841UniSTSGRCm37
Celera1926,141,849 - 26,141,929UniSTS
Cytogenetic Map19BUniSTS
D19Mit40  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381925,336,321 - 25,336,432UniSTSGRCm38
MGSCv371925,410,811 - 25,410,922UniSTSGRCm37
Celera1926,127,890 - 26,127,991UniSTS
Cytogenetic Map19BUniSTS
cM Map1925.0UniSTS
Whitehead Genetic1917.5UniSTS
Whitehead_YAC19 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001348180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030250693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV226476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC152400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000049400   ⟹   ENSMUSP00000042177
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1925,214,339 - 25,411,860 (+)Ensembl
GRCm38.p6 Ensembl1925,236,975 - 25,434,496 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137260
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1925,372,667 - 25,387,136 (+)Ensembl
GRCm38.p6 Ensembl1925,395,303 - 25,409,772 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146647   ⟹   ENSMUSP00000116660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1925,384,063 - 25,403,348 (+)Ensembl
GRCm38.p6 Ensembl1925,406,699 - 25,425,984 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155788
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1925,399,603 - 25,401,872 (+)Ensembl
GRCm38.p6 Ensembl1925,422,239 - 25,424,508 (+)Ensembl
RefSeq Acc Id: NM_001348180   ⟹   NP_001335109
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
GRCm381925,236,975 - 25,434,498 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001404570   ⟹   NP_001391499
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,146 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404572   ⟹   NP_001391501
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404573   ⟹   NP_001391502
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404574   ⟹   NP_001391503
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404575   ⟹   NP_001391504
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,837 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404576   ⟹   NP_001391505
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,837 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404577   ⟹   NP_001391506
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,146 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404578   ⟹   NP_001391507
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404579   ⟹   NP_001391508
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,837 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404580   ⟹   NP_001391509
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,837 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404581   ⟹   NP_001391510
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,372,690 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404582   ⟹   NP_001391511
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,050 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404583   ⟹   NP_001391512
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,050 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404584   ⟹   NP_001391513
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,050 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404585   ⟹   NP_001391514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,050 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404605   ⟹   NP_001391534
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,050 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404607   ⟹   NP_001391536
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,312 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404608   ⟹   NP_001391537
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,312 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_001404610   ⟹   NP_001391539
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,312 - 25,411,861 (+)NCBI
RefSeq Acc Id: NM_181404   ⟹   NP_852069
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,214,333 - 25,411,861 (+)NCBI
GRCm381925,236,975 - 25,434,498 (+)NCBI
MGSCv371925,311,692 - 25,508,986 (+)RGD
Celera1926,023,481 - 26,224,832 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006526585   ⟹   XP_006526648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,277,908 - 25,411,861 (+)NCBI
GRCm381925,300,544 - 25,434,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526586   ⟹   XP_006526649
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,034 - 25,411,861 (+)NCBI
GRCm381925,406,675 - 25,434,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006526590   ⟹   XP_006526653
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,016 - 25,400,397 (+)NCBI
GRCm381925,406,673 - 25,423,033 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250692   ⟹   XP_030106552
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,360,864 - 25,411,861 (+)NCBI
GRCm381925,383,467 - 25,434,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030250693   ⟹   XP_030106553
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,359,676 - 25,411,861 (+)NCBI
GRCm381925,382,303 - 25,434,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036161387   ⟹   XP_036017280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,339,583 - 25,411,861 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036161391   ⟹   XP_036017284
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,340,281 - 25,411,861 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004940110
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391925,384,009 - 25,411,861 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001335109 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391499 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391501 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391502 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391503 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391504 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391505 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391506 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391507 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391508 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391509 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391510 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391511 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391512 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391513 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391514 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391534 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391536 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391537 (Get FASTA)   NCBI Sequence Viewer  
  NP_001391539 (Get FASTA)   NCBI Sequence Viewer  
  NP_852069 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526648 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526649 (Get FASTA)   NCBI Sequence Viewer  
  XP_006526653 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106552 (Get FASTA)   NCBI Sequence Viewer  
  XP_030106553 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017280 (Get FASTA)   NCBI Sequence Viewer  
  XP_036017284 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH50250 (Get FASTA)   NCBI Sequence Viewer  
  AAH58673 (Get FASTA)   NCBI Sequence Viewer  
  AAH79563 (Get FASTA)   NCBI Sequence Viewer  
  AAI52401 (Get FASTA)   NCBI Sequence Viewer  
  BAC30778 (Get FASTA)   NCBI Sequence Viewer  
  BAC39237 (Get FASTA)   NCBI Sequence Viewer  
  BAC65496 (Get FASTA)   NCBI Sequence Viewer  
  EDL41628 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000042177
  ENSMUSP00000042177.9
  ENSMUSP00000116660
  ENSMUSP00000116660.2
RefSeq Acc Id: NP_852069   ⟸   NM_181404
- Peptide Label: isoform 1
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL),   E9Q238 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526648   ⟸   XM_006526585
- Peptide Label: isoform X2
- UniProtKB: E9Q238 (UniProtKB/TrEMBL),   Q6AXG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526653   ⟸   XM_006526590
- Peptide Label: isoform X6
- UniProtKB: E9Q944 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526649   ⟸   XM_006526586
- Peptide Label: isoform X3
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001335109   ⟸   NM_001348180
- Peptide Label: isoform 2
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106553   ⟸   XM_030250693
- Peptide Label: isoform X5
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030106552   ⟸   XM_030250692
- Peptide Label: isoform X5
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000042177   ⟸   ENSMUST00000049400
RefSeq Acc Id: ENSMUSP00000116660   ⟸   ENSMUST00000146647
RefSeq Acc Id: XP_036017280   ⟸   XM_036161387
- Peptide Label: isoform X2
- UniProtKB: E9Q238 (UniProtKB/TrEMBL),   Q6AXG6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017284   ⟸   XM_036161391
- Peptide Label: isoform X4
- UniProtKB: Q6AXG6 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391499   ⟸   NM_001404570
- Peptide Label: isoform 1
- UniProtKB: E9Q238 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391506   ⟸   NM_001404577
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001391503   ⟸   NM_001404574
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001391502   ⟸   NM_001404573
- Peptide Label: isoform 1
- UniProtKB: E9Q238 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391507   ⟸   NM_001404578
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001391501   ⟸   NM_001404572
- Peptide Label: isoform 1
- UniProtKB: E9Q238 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391505   ⟸   NM_001404576
- Peptide Label: isoform 1
- UniProtKB: E9Q238 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391509   ⟸   NM_001404580
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001391504   ⟸   NM_001404575
- Peptide Label: isoform 1
- UniProtKB: E9Q238 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391508   ⟸   NM_001404579
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001391510   ⟸   NM_001404581
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001391512   ⟸   NM_001404583
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001391513   ⟸   NM_001404584
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001391511   ⟸   NM_001404582
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001391534   ⟸   NM_001404605
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001391514   ⟸   NM_001404585
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001391539   ⟸   NM_001404610
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001391537   ⟸   NM_001404608
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001391536   ⟸   NM_001404607
- Peptide Label: isoform 4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q238-F1-model_v2 AlphaFold E9Q238 1-1360 view protein structure

Promoters
RGD ID:13679150
Promoter ID:EPDNEW_M23724
Type:multiple initiation site
Name:Kank1_2
Description:Mus musculus KN motif and ankyrin repeat domains 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23725  EPDNEW_M23726  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381925,237,259 - 25,237,319EPDNEW
RGD ID:13679152
Promoter ID:EPDNEW_M23725
Type:multiple initiation site
Name:Kank1_3
Description:Mus musculus KN motif and ankyrin repeat domains 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23724  EPDNEW_M23726  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381925,237,460 - 25,237,520EPDNEW
RGD ID:6830134
Promoter ID:MM_KWN:26718
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney
Transcripts:ENSMUST00000078392,   OTTMUST00000084032
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361925,311,184 - 25,311,684 (+)MPROMDB
RGD ID:13679154
Promoter ID:EPDNEW_M23726
Type:initiation region
Name:Kank1_1
Description:Mus musculus KN motif and ankyrin repeat domains 1 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M23724  EPDNEW_M23725  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381925,406,948 - 25,407,008EPDNEW
RGD ID:6830139
Promoter ID:MM_KWN:26720
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:OTTMUST00000084034
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361925,469,596 - 25,470,096 (+)MPROMDB
RGD ID:6830138
Promoter ID:MM_KWN:26721
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000084033
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361925,481,109 - 25,481,609 (+)MPROMDB
RGD ID:6829854
Promoter ID:MM_KWN:26722
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Brain,   Kidney,   Liver,   Lung,   MEF_B6,   Spleen
Transcripts:UC008HBH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361925,482,591 - 25,486,022 (+)MPROMDB
RGD ID:6830140
Promoter ID:MM_KWN:26723
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:OTTMUST00000084035
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361925,496,566 - 25,497,066 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2147707 AgrOrtholog
Ensembl Genes ENSMUSG00000032702 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000049400 ENTREZGENE
  ENSMUST00000049400.15 UniProtKB/TrEMBL
  ENSMUST00000146647 ENTREZGENE
  ENSMUST00000146647.3 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  KANK1-4 UniProtKB/TrEMBL
  KN_motif UniProtKB/TrEMBL
KEGG Report mmu:107351 UniProtKB/TrEMBL
MGD MGI:2147707 ENTREZGENE
NCBI Gene 107351 ENTREZGENE
PANTHER KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING UniProtKB/TrEMBL
  KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  KN_motif UniProtKB/TrEMBL
PhenoGen Kank1 PhenoGen
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A7MCX9_MOUSE UniProtKB/TrEMBL
  E9Q238 ENTREZGENE, UniProtKB/TrEMBL
  E9Q944 ENTREZGENE, UniProtKB/TrEMBL
  Q6AXG6 ENTREZGENE, UniProtKB/TrEMBL
  Q6PDJ3_MOUSE UniProtKB/TrEMBL
  Q810T9_MOUSE UniProtKB/TrEMBL
  Q8BRZ8_MOUSE UniProtKB/TrEMBL
  Q8BUK3_MOUSE UniProtKB/TrEMBL