N4bp2l2 (NEDD4 binding protein 2-like 2) - Rat Genome Database

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Gene: N4bp2l2 (NEDD4 binding protein 2-like 2) Mus musculus
Analyze
Symbol: N4bp2l2
Name: NEDD4 binding protein 2-like 2
RGD ID: 1617945
MGI Page MGI
Description: Enables transcription corepressor activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within blastocyst development. Located in nucleus. Orthologous to human N4BP2L2 (NEDD4 binding protein 2 like 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2700092H06Rik; Gm38758; MGC25830; NEDD4-binding protein 2-like 2; phosphonoformate immuno-associated protein 5 homolog; predicted gene, 38758; RIKEN cDNA 2700092H06 gene; zag; zag1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395150,515,310 - 150,589,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5150,531,472 - 150,589,648 (-)EnsemblGRCm39 Ensembl
GRCm385150,599,931 - 150,665,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5150,608,007 - 150,666,183 (-)EnsemblGRCm38mm10GRCm38
MGSCv375151,438,548 - 151,468,187 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365150,916,589 - 150,933,956 (-)NCBIMGSCv36mm8
Celera5148,640,440 - 148,670,079 (-)NCBICelera
Cytogenetic Map5G3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
chlorpyrifos  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
ethyl methanesulfonate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
imidacloprid  (ISO)
lead diacetate  (EXP)
leflunomide  (ISO)
mercury dibromide  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
thapsigargin  (ISO)
theophylline  (ISO)
thiabendazole  (ISO)
thimerosal  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15840001  
PMID:16141072   PMID:16141073   PMID:18360097   PMID:18799693   PMID:18815245   PMID:19506020   PMID:21873635   PMID:32325033   PMID:34839354  


Genomics

Comparative Map Data
N4bp2l2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395150,515,310 - 150,589,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5150,531,472 - 150,589,648 (-)EnsemblGRCm39 Ensembl
GRCm385150,599,931 - 150,665,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5150,608,007 - 150,666,183 (-)EnsemblGRCm38mm10GRCm38
MGSCv375151,438,548 - 151,468,187 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365150,916,589 - 150,933,956 (-)NCBIMGSCv36mm8
Celera5148,640,440 - 148,670,079 (-)NCBICelera
Cytogenetic Map5G3NCBI
N4BP2L2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381332,432,485 - 32,538,868 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1332,432,417 - 32,538,885 (-)EnsemblGRCh38hg38GRCh38
GRCh371333,006,622 - 33,113,005 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361331,904,930 - 32,010,936 (-)NCBINCBI36Build 36hg18NCBI36
Celera1314,073,721 - 14,179,731 (-)NCBICelera
Cytogenetic Map13q13.1NCBI
HuRef1313,818,368 - 13,923,753 (-)NCBIHuRef
CHM1_11332,974,162 - 33,080,564 (-)NCBICHM1_1
T2T-CHM13v2.01331,649,729 - 31,756,133 (-)NCBIT2T-CHM13v2.0
N4bp2l2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8124,972,967 - 5,038,027 (-)NCBIGRCr8
mRatBN7.212137,342 - 200,292 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl12103,590 - 197,784 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx12706,021 - 768,933 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0121,228,260 - 1,291,179 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.012127,903 - 190,623 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.012627,128 - 650,604 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl12628,488 - 650,376 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.012611,943 - 635,074 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4124,184,417 - 4,205,550 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1124,184,416 - 4,205,549 (+)NCBI
Celera121,887,059 - 1,908,425 (-)NCBICelera
Cytogenetic Map12p12NCBI
N4bp2l2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543113,314,075 - 13,418,090 (+)NCBIChiLan1.0ChiLan1.0
N4BP2L2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21431,998,173 - 32,106,760 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11323,105,030 - 23,213,013 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01313,691,326 - 13,803,162 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11332,133,618 - 32,231,146 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1332,133,603 - 32,231,003 (-)Ensemblpanpan1.1panPan2
N4BP2L2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1257,622,032 - 7,694,396 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl257,623,670 - 7,694,398 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha257,651,935 - 7,724,601 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0257,718,162 - 7,791,082 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl257,718,103 - 7,790,814 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1257,618,218 - 7,691,056 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,616,390 - 7,689,291 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0257,673,686 - 7,746,570 (+)NCBIUU_Cfam_GSD_1.0
N4bp2l2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945168,816,704 - 168,905,434 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647227,045,052 - 27,134,170 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
N4BP2L2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1118,891,053 - 8,997,810 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2118,713,909 - 8,737,772 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103214263
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1311,191,215 - 11,287,434 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl311,197,302 - 11,285,607 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605733,065,334 - 33,161,891 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
N4bp2l2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247765,295,054 - 5,467,454 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in N4bp2l2
1845 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2430
Count of miRNA genes:885
Interacting mature miRNAs:1201
Transcripts:ENSMUST00000118316, ENSMUST00000141857, ENSMUST00000144378, ENSMUST00000145822, ENSMUST00000156180, ENSMUST00000164332
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5139985755151658149Mouse

Markers in Region
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
UniSTS:235379  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385150,641,731 - 150,642,057UniSTSGRCm38
MGSCv375151,444,306 - 151,444,632UniSTSGRCm37
Celera5148,646,198 - 148,646,524UniSTS
Cytogenetic Map5G3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_201369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL358892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW488478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA556104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB231597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB595845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD561511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF724618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ162163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000118316   ⟹   ENSMUSP00000113895
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,559,437 - 150,589,077 (-)Ensembl
GRCm38.p6 Ensembl5150,635,972 - 150,665,612 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141857   ⟹   ENSMUSP00000121091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,585,882 - 150,588,811 (-)Ensembl
GRCm38.p6 Ensembl5150,662,417 - 150,665,346 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,571,675 - 150,589,042 (-)Ensembl
GRCm38.p6 Ensembl5150,648,210 - 150,665,577 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145822
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,566,478 - 150,571,258 (-)Ensembl
GRCm38.p6 Ensembl5150,643,013 - 150,647,793 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156180   ⟹   ENSMUSP00000118475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,566,465 - 150,584,952 (-)Ensembl
GRCm38.p6 Ensembl5150,643,000 - 150,661,487 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164332
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,531,472 - 150,570,984 (-)Ensembl
GRCm38.p6 Ensembl5150,608,007 - 150,647,519 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201384
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,564,201 - 150,571,726 (-)Ensembl
GRCm38.p6 Ensembl5150,640,736 - 150,648,261 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5150,588,640 - 150,589,648 (-)Ensembl
GRCm38.p6 Ensembl5150,665,175 - 150,666,183 (-)Ensembl
RefSeq Acc Id: NM_001362416   ⟹   NP_001349345
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,523,397 - 150,589,077 (-)NCBI
GRCm385150,599,932 - 150,665,612 (-)NCBI
Sequence:
RefSeq Acc Id: NM_201369   ⟹   NP_958757
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,559,438 - 150,589,077 (-)NCBI
GRCm385150,635,973 - 150,665,612 (-)NCBI
MGSCv375151,438,548 - 151,468,187 (-)RGD
Celera5148,640,440 - 148,670,079 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030254629   ⟹   XP_030110489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,515,310 - 150,589,213 (-)NCBI
GRCm385150,599,931 - 150,665,748 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254630   ⟹   XP_030110490
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,515,310 - 150,589,213 (-)NCBI
GRCm385150,599,931 - 150,665,748 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165248   ⟹   XP_036021141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,515,310 - 150,589,213 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165249   ⟹   XP_036021142
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,515,310 - 150,588,941 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165251   ⟹   XP_036021144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,515,310 - 150,588,940 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036165252   ⟹   XP_036021145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395150,523,396 - 150,589,070 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_958757   ⟸   NM_201369
- Peptide Label: isoform 2
- UniProtKB: Q8JZS6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030110490   ⟸   XM_030254630
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030110489   ⟸   XM_030254629
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001349345   ⟸   NM_001362416
- Peptide Label: isoform 1
RefSeq Acc Id: ENSMUSP00000113895   ⟸   ENSMUST00000118316
RefSeq Acc Id: ENSMUSP00000118475   ⟸   ENSMUST00000156180
RefSeq Acc Id: ENSMUSP00000121091   ⟸   ENSMUST00000141857
RefSeq Acc Id: XP_036021141   ⟸   XM_036165248
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021142   ⟸   XM_036165249
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021144   ⟸   XM_036165251
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021145   ⟸   XM_036165252
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8JZS6-F1-model_v2 AlphaFold Q8JZS6 1-575 view protein structure

Promoters
RGD ID:6888896
Promoter ID:EPDNEW_M7899
Type:initiation region
Name:N4bp2l2_1
Description:Mus musculus NEDD4 binding protein 2-like 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385150,665,588 - 150,665,648EPDNEW
RGD ID:6837933
Promoter ID:MM_KWN:45034
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000069174
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365151,463,696 - 151,464,196 (-)MPROMDB
RGD ID:6837932
Promoter ID:MM_KWN:45035
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000118316,   OTTMUST00000069172,   OTTMUST00000069173
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365151,467,804 - 151,468,304 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2687207 AgrOrtholog
Ensembl Genes ENSMUSG00000029655 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000118316 ENTREZGENE
  ENSMUST00000118316.8 UniProtKB/Swiss-Prot
  ENSMUST00000141857.2 UniProtKB/TrEMBL
  ENSMUST00000156180.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro NEDD4_b_p2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:381695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2687207 ENTREZGENE
NCBI Gene 381695 ENTREZGENE
PANTHER PTHR13308 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13308:SF23 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam AAA_33 UniProtKB/Swiss-Prot
PhenoGen N4bp2l2 PhenoGen
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YTM6_MOUSE UniProtKB/TrEMBL
  F6WBP1_MOUSE UniProtKB/TrEMBL
  N42L2_MOUSE UniProtKB/Swiss-Prot
  Q8BYP6_MOUSE UniProtKB/TrEMBL
  Q8JZS6 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-04-17 N4bp2l2  NEDD4 binding protein 2-like 2  Gm38758  predicted gene, 38758  Data merged from RGD:10023071 737654 PROVISIONAL
2016-04-05 N4bp2l2  NEDD4 binding protein 2-like 2  2700092H06Rik  RIKEN cDNA 2700092H06 gene  Data merged from RGD:1612171 737654 PROVISIONAL