Gm14571 (predicted gene 14571) - Rat Genome Database

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Gene: Gm14571 (predicted gene 14571) Mus musculus
Analyze
Symbol: Gm14571
Name: predicted gene 14571
RGD ID: 1617934
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG385521
Related Functional Gene: Rpsa  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X38,884,615 - 38,886,106 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX38,885,461 - 38,886,030 (+)EnsemblGRCm39 Ensembl
GRCm38X39,795,738 - 39,797,229 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX39,796,584 - 39,797,153 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X37,148,993 - 37,150,330 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X36,041,502 - 36,041,810 (+)NCBIMGSCv36mm8
CeleraX27,410,990 - 27,412,327 (+)NCBICelera
Cytogenetic MapXA3.3NCBI
cM MapX23.19NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14571
27 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:80
Count of miRNA genes:75
Interacting mature miRNAs:76
Transcripts:ENSMUST00000118292
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000118292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX38,885,461 - 38,886,030 (+)Ensembl
GRCm38.p6 EnsemblX39,796,584 - 39,797,153 (+)Ensembl
RefSeq Acc Id: XM_887453   ⟹   XP_892546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37X36,041,502 - 36,041,810 (+)RGD
RefSeq Acc Id: XM_912237   ⟹   XP_917330
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
CeleraX27,412,049 - 27,412,357 (+)RGD

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000083845 Ensembl
MGD MGI:3644699 ENTREZGENE
NCBI Gene Gm14571 ENTREZGENE
PhenoGen Gm14571 PhenoGen