Reep3 (receptor accessory protein 3) - Rat Genome Database

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Gene: Reep3 (receptor accessory protein 3) Mus musculus
Analyze
Symbol: Reep3
Name: receptor accessory protein 3
RGD ID: 1617587
MGI Page MGI
Description: Predicted to enable microtubule binding activity. Predicted to be involved in endoplasmic reticulum tubular network organization and mitotic nuclear membrane reassembly. Predicted to act upstream of or within cell division. Predicted to be located in endoplasmic reticulum; membrane; and microtubule. Predicted to be active in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. Is expressed in several structures, including heart valve; limb segment; trigeminal ganglion; and ventricular layer. Orthologous to human REEP3 (receptor accessory protein 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI265725; AW742655; D10Ucl; D10Ucla1; receptor expression enhancing protein 3; receptor expression-enhancing protein 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391066,844,968 - 66,932,767 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1066,844,968 - 66,932,724 (-)EnsemblGRCm39 Ensembl
GRCm381067,009,189 - 67,096,988 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1067,009,189 - 67,096,945 (-)EnsemblGRCm38mm10GRCm38
MGSCv371066,474,256 - 66,559,605 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361066,406,865 - 66,492,214 (-)NCBIMGSCv36mm8
Celera1068,103,541 - 68,155,033 (-)NCBICelera
Cytogenetic Map10B5.1NCBI
cM Map1034.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:3755389   PMID:8288233   PMID:8827514   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334  
PMID:15550249   PMID:15840001   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17967808   PMID:18799693   PMID:18973680   PMID:21267068   PMID:21345367   PMID:21873635   PMID:28106071  
PMID:32554809  


Genomics

Comparative Map Data
Reep3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391066,844,968 - 66,932,767 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1066,844,968 - 66,932,724 (-)EnsemblGRCm39 Ensembl
GRCm381067,009,189 - 67,096,988 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1067,009,189 - 67,096,945 (-)EnsemblGRCm38mm10GRCm38
MGSCv371066,474,256 - 66,559,605 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361066,406,865 - 66,492,214 (-)NCBIMGSCv36mm8
Celera1068,103,541 - 68,155,033 (-)NCBICelera
Cytogenetic Map10B5.1NCBI
cM Map1034.83NCBI
REEP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381063,521,401 - 63,625,128 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1063,521,401 - 63,625,128 (+)EnsemblGRCh38hg38GRCh38
GRCh371065,281,161 - 65,384,888 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361064,951,129 - 65,051,978 (+)NCBINCBI36Build 36hg18NCBI36
Celera1058,548,607 - 58,652,369 (+)NCBICelera
Cytogenetic Map10q21.3NCBI
HuRef1059,317,846 - 59,376,614 (+)NCBIHuRef
CHM1_11065,563,144 - 65,666,882 (+)NCBICHM1_1
T2T-CHM13v2.01064,379,547 - 64,483,523 (+)NCBIT2T-CHM13v2.0
Reep3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82021,492,695 - 21,575,138 (+)NCBIGRCr8
mRatBN7.22021,493,868 - 21,578,698 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2021,493,954 - 21,578,697 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2022,218,031 - 22,300,470 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02021,571,101 - 21,653,543 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02022,048,115 - 22,130,183 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02022,887,053 - 22,998,985 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2022,913,694 - 22,999,010 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02025,003,934 - 25,089,118 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42022,314,093 - 22,397,087 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2022,851,967 - 22,934,389 (+)NCBICelera
Cytogenetic Map20p11NCBI
Reep3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542516,643,272 - 16,689,549 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542516,633,900 - 16,689,549 (+)NCBIChiLan1.0ChiLan1.0
REEP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2875,706,156 - 75,811,457 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11075,711,510 - 75,816,781 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01060,028,052 - 60,133,363 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11062,395,535 - 62,454,931 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1062,351,045 - 62,454,931 (+)Ensemblpanpan1.1panPan2
REEP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1415,369,720 - 15,426,661 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl415,373,333 - 15,423,354 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha415,546,366 - 15,644,122 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0415,593,837 - 15,691,784 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl415,593,812 - 15,691,778 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1415,575,593 - 15,673,328 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0415,704,923 - 15,802,581 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0416,056,469 - 16,154,257 (+)NCBIUU_Cfam_GSD_1.0
Reep3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721365,704,753 - 65,790,674 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367531,276,666 - 1,365,294 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367531,279,979 - 1,365,288 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
REEP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1466,966,372 - 67,071,191 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11466,966,068 - 67,071,200 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21472,253,247 - 72,360,109 (+)NCBISscrofa10.2Sscrofa10.2susScr3
REEP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1967,667,557 - 67,772,602 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl967,671,746 - 67,772,609 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604828,552,186 - 28,657,339 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Reep3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624791212,200 - 307,160 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624791208,577 - 307,192 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Reep3
3468 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1619
Count of miRNA genes:663
Interacting mature miRNAs:853
Transcripts:ENSMUST00000020023
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
1301003Lmblgq4_mlimb length QTL 4 (mouse)Not determined102159119268091639Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
27095920Pglq9_mpelvic girdle length QTL 9, 10 week (mouse)103377599670835830Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
4141070Ltgq1_mliver triglyceride QTL 1 (mouse)Not determined4123732675237326Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
26884421Cvht5_mcranial vault height 5, 10 week (mouse)104557609669135830Mouse
26884400Huml5_mhumerus length 5, 16 week (mouse)104627609669235830Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
4141159Phl2_mprogressive hearing loss 2 (mouse)Not determined104797449970112651Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
38455999Lick3_mlick rate 3 (mouse)106187303169373082Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse

Markers in Region
AW742655  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,010,675 - 67,010,865UniSTSGRCm38
MGSCv371066,473,423 - 66,473,613UniSTSGRCm37
Celera1068,102,698 - 68,102,888UniSTS
Cytogenetic Map10B5.1UniSTS
Whitehead/MRC_RH10777.18UniSTS
Avpr1b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10D1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map18D3UniSTS
Cytogenetic MapXF1UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map13B2UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map7F2UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map10D2UniSTS
Cytogenetic Map10B5.1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map18B3UniSTS
cM Map1 UniSTS
AI265725  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,009,542 - 67,009,713UniSTSGRCm38
MGSCv371066,472,290 - 66,472,461UniSTSGRCm37
Celera1068,101,565 - 68,101,736UniSTS
Cytogenetic Map10B5.1UniSTS
Whitehead/MRC_RH10782.2UniSTS
UniSTS:236370  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,078,628 - 67,078,846UniSTSGRCm38
MGSCv371066,541,376 - 66,541,594UniSTSGRCm37
Celera1068,170,585 - 68,170,803UniSTS
Cytogenetic Map10B5.1UniSTS
UniSTS:236372  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,009,366 - 67,009,612UniSTSGRCm38
GRCm38477,552,728 - 77,552,985UniSTSGRCm38
MGSCv37477,198,632 - 77,198,889UniSTSGRCm37
MGSCv371066,472,114 - 66,472,360UniSTSGRCm37
Celera1068,101,389 - 68,101,635UniSTS
Celera476,084,636 - 76,084,893UniSTS
Cytogenetic Map10B5.1UniSTS
px-31f3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B5UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map16C3.3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map10A3-A4UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B5UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map10C3UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map10B5.1UniSTS
Cytogenetic Map18E4UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map18D1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map12C2UniSTS
Cytogenetic Map13B2UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map10D1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map18D3UniSTS
cM Map1060.0UniSTS
cM Map154.6UniSTS
cM Map439.4UniSTS
cM Map1170.0UniSTS
cM Map1336.0UniSTS
cM Map518.2UniSTS
cM Map1229.0UniSTS
cM MapX42.0UniSTS
cM Map1347.01UniSTS
D10Mit15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,012,443 - 67,012,618UniSTSGRCm38
MGSCv371066,475,191 - 66,475,366UniSTSGRCm37
Celera1068,104,476 - 68,104,655UniSTS
Cytogenetic Map10B5.1UniSTS
cM Map1035.0UniSTS
Whitehead Genetic1025.1UniSTS
D10Mit20  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381067,012,408 - 67,012,633UniSTSGRCm38
MGSCv371066,475,156 - 66,475,381UniSTSGRCm37
Celera1068,104,441 - 68,104,670UniSTS
Cytogenetic Map10B5.1UniSTS
cM Map1035.0UniSTS
Whitehead Genetic1025.1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001204915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY562231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ163373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X03943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000020023   ⟹   ENSMUSP00000020023
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1066,844,968 - 66,932,724 (-)Ensembl
GRCm38.p6 Ensembl1067,009,189 - 67,096,945 (-)Ensembl
RefSeq Acc Id: ENSMUST00000217841   ⟹   ENSMUSP00000151994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1066,847,451 - 66,932,625 (-)Ensembl
GRCm38.p6 Ensembl1067,011,672 - 67,096,846 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218920   ⟹   ENSMUSP00000151490
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1066,864,705 - 66,870,411 (-)Ensembl
GRCm38.p6 Ensembl1067,028,926 - 67,034,632 (-)Ensembl
RefSeq Acc Id: ENSMUST00000219431
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1066,870,998 - 66,873,101 (-)Ensembl
GRCm38.p6 Ensembl1067,035,219 - 67,037,322 (-)Ensembl
RefSeq Acc Id: NM_001204915   ⟹   NP_001191844
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,844,968 - 66,932,767 (-)NCBI
GRCm381067,009,189 - 67,096,988 (-)ENTREZGENE
Celera1068,101,212 - 68,189,005 (-)ENTREZGENE
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_178606   ⟹   NP_848721
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,844,968 - 66,932,767 (-)NCBI
GRCm381067,009,189 - 67,096,988 (-)ENTREZGENE
MGSCv371066,474,256 - 66,559,605 (-)RGD
Celera1068,101,212 - 68,189,005 (-)ENTREZGENE
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006513726   ⟹   XP_006513789
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,844,968 - 66,932,195 (-)NCBI
GRCm381067,009,189 - 67,096,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006513727   ⟹   XP_006513790
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,864,705 - 66,932,762 (-)NCBI
GRCm381067,028,926 - 67,096,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006513728   ⟹   XP_006513791
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,864,705 - 66,932,762 (-)NCBI
GRCm381067,028,926 - 67,096,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155799   ⟹   XP_036011692
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391066,866,197 - 66,932,762 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_848721   ⟸   NM_178606
- Peptide Label: isoform 2
- UniProtKB: Q9CZM8 (UniProtKB/Swiss-Prot),   Q9D8G3 (UniProtKB/Swiss-Prot),   Q99KK1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001191844   ⟸   NM_001204915
- Peptide Label: isoform 1
- UniProtKB: A0A1W2P8A8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006513789   ⟸   XM_006513726
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006513791   ⟸   XM_006513728
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006513790   ⟸   XM_006513727
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000151490   ⟸   ENSMUST00000218920
RefSeq Acc Id: ENSMUSP00000151994   ⟸   ENSMUST00000217841
RefSeq Acc Id: ENSMUSP00000020023   ⟸   ENSMUST00000020023
RefSeq Acc Id: XP_036011692   ⟸   XM_036155799
- Peptide Label: isoform X3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99KK1-F1-model_v2 AlphaFold Q99KK1 1-254 view protein structure

Promoters
RGD ID:6819798
Promoter ID:MM_KWN:4407
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day4,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000020023
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361066,559,471 - 66,560,042 (-)MPROMDB
RGD ID:8672192
Promoter ID:EPDNEW_M14126
Type:initiation region
Name:Reep3_1
Description:Mus musculus receptor accessory protein 3 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381067,096,916 - 67,096,976EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88930 AgrOrtholog
Ensembl Genes ENSMUSG00000019873 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020023 ENTREZGENE
  ENSMUST00000020023.9 UniProtKB/Swiss-Prot
  ENSMUST00000217841 ENTREZGENE
  ENSMUST00000217841.2 UniProtKB/TrEMBL
  ENSMUST00000218920.2 UniProtKB/TrEMBL
InterPro TB2_DP1_HVA22 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:28193 UniProtKB/Swiss-Prot
MGD MGI:88930 ENTREZGENE
NCBI Gene 28193 ENTREZGENE
PANTHER PTHR12300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RECEPTOR EXPRESSION-ENHANCING PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TB2_DP1_HVA22 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Reep3 PhenoGen
UniProt A0A1W2P723_MOUSE UniProtKB/TrEMBL
  A0A1W2P8A8 ENTREZGENE, UniProtKB/TrEMBL
  Q99KK1 ENTREZGENE
  Q9CZM8 ENTREZGENE
  Q9D8G3 ENTREZGENE
  REEP3_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q9CZM8 UniProtKB/Swiss-Prot
  Q9D8G3 UniProtKB/Swiss-Prot