2510002D24Rik (RIKEN cDNA 2510002D24 gene) - Rat Genome Database

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Gene: 2510002D24Rik (RIKEN cDNA 2510002D24 gene) Mus musculus
Analyze
Symbol: 2510002D24Rik
Name: RIKEN cDNA 2510002D24 gene
RGD ID: 1617503
MGI Page MGI
Description: Involved in negative regulation of long-term synaptic potentiation. Located in synapse and synaptic cleft. Is expressed in several structures, including brain; heart; liver; male reproductive gland or organ; and small intestine. Orthologous to human C22orf39 (chromosome 22 open reading frame 39).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2410043I01Rik; AA163535; AA409624; DXMgi2; DXMgi27; hypothetical protein LOC72307; P; Pants; plasticity-associated neural transcript; synaptic plasticity regulator PANTS; UPF0545 protein C22orf39 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391618,655,263 - 18,658,910 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1618,655,328 - 18,658,910 (+)EnsemblGRCm39 Ensembl
GRCm381618,836,580 - 18,840,113 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1618,836,578 - 18,840,160 (+)EnsemblGRCm38mm10GRCm38
MGSCv371618,836,673 - 18,840,206 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361618,750,154 - 18,753,503 (+)NCBIMGSCv36mm8
Celera1619,410,637 - 19,414,170 (+)NCBICelera
Cytogenetic Map16A3NCBI
cM Map1611.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10704284   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693  
PMID:21267068   PMID:24194600   PMID:27184122   PMID:27626380   PMID:29571919   PMID:35771867  


Genomics

Comparative Map Data
2510002D24Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391618,655,263 - 18,658,910 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1618,655,328 - 18,658,910 (+)EnsemblGRCm39 Ensembl
GRCm381618,836,580 - 18,840,113 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1618,836,578 - 18,840,160 (+)EnsemblGRCm38mm10GRCm38
MGSCv371618,836,673 - 18,840,206 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361618,750,154 - 18,753,503 (+)NCBIMGSCv36mm8
Celera1619,410,637 - 19,414,170 (+)NCBICelera
Cytogenetic Map16A3NCBI
cM Map1611.67NCBI
C22orf39
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382219,440,886 - 19,447,711 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2219,351,368 - 19,447,711 (-)EnsemblGRCh38hg38GRCh38
GRCh372219,428,409 - 19,435,234 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362217,810,894 - 17,815,220 (-)NCBINCBI36Build 36hg18NCBI36
Celera223,280,666 - 3,288,012 (-)NCBICelera
Cytogenetic Map22q11.21NCBI
HuRef223,049,221 - 3,056,567 (-)NCBIHuRef
CHM1_12219,427,982 - 19,435,325 (-)NCBICHM1_1
T2T-CHM13v2.02219,817,716 - 19,824,539 (-)NCBIT2T-CHM13v2.0
C11h22orf39
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81195,660,135 - 95,665,750 (-)NCBIGRCr8
mRatBN7.21182,155,992 - 82,160,235 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,159,528 - 82,160,235 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,885,310 - 90,889,571 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01183,546,530 - 83,550,791 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01182,599,798 - 82,604,059 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01186,299,210 - 86,303,453 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1186,299,210 - 86,303,453 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01189,401,176 - 89,405,419 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1180,936,482 - 80,940,725 (-)NCBICelera
Cytogenetic Map11q23NCBI
CUNH22orf39
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544218,570,867 - 18,576,076 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544218,570,867 - 18,575,809 (+)NCBIChiLan1.0ChiLan1.0
C23H22orf39
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22329,065,830 - 29,072,733 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12231,613,548 - 31,620,575 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0222,200,164 - 2,207,473 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12217,875,330 - 17,882,694 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2217,875,330 - 17,882,694 (-)Ensemblpanpan1.1panPan2
C26H22orf39
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12629,765,870 - 29,770,079 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2629,765,936 - 29,769,471 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2629,721,278 - 29,725,460 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02631,167,718 - 31,171,885 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2631,167,707 - 31,172,044 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12629,215,010 - 29,219,178 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02628,840,415 - 28,844,599 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02629,927,353 - 29,931,531 (+)NCBIUU_Cfam_GSD_1.0
CUNH22orf39
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118139,360,729 - 139,365,635 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366193,388,427 - 3,393,253 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366193,388,427 - 3,393,299 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C14H22orf39
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1451,106,991 - 51,112,359 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11451,106,984 - 51,112,385 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21454,674,018 - 54,679,446 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH22orf39
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1196,307,277 - 6,312,609 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl196,307,916 - 6,311,459 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666085618,793 - 626,347 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH22orf39
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624747103,310 - 107,382 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624747101,938 - 109,335 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:399
Count of miRNA genes:299
Interacting mature miRNAs:334
Transcripts:ENSMUST00000055413, ENSMUST00000123146
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141060Pbwg19_mpostnatal body weight growth 19 (mouse)Not determined16120780888Mouse
1300632Loca2_mlocomotor activity 2 (mouse)Not determined16122500574Mouse
10043879Adip25_madiposity 25 (mouse)Not determined16122520318Mouse
1301575Tanidd3_mtally ho associated non-insulin dependednt diabetes mellitus 3 (mouse)Not determined16122897739Mouse
4141468Nhdlq10_mnon-HDL QTL 10 (mouse)Not determined16124263853Mouse
1301970Heal11_mwound healing/regeneration 11 (mouse)Not determined16124263853Mouse
1301384Dice1_mdetermination of interleukin 4 commitment 1 (mouse)Not determined16128434358Mouse
10402497Lmr23_mleishmaniasis resistance 23 (mouse)Not determined16129674200Mouse
1301559Bbaa19_mB.burgdorferi-associated arthritis 19 (mouse)Not determined16130066977Mouse
10412289Ppsl_mplasma P-selectin levels (mouse)Not determined16130814572Mouse
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16331786439820362Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
1301443Mopkd2_mmodifier of polycystic kidney disease progression 2 (mouse)Not determined16464631438646414Mouse
1300656Bgeq15_mbody growth early QTL 15 (mouse)Not determined16577525239775440Mouse
1301945Skl7_mskeletal size (tail length) 7 (mouse)Not determined16577525239775440Mouse
1300943Skts9_mskin tumor susceptibility 9 (mouse)Not determined16577525239775440Mouse
1300987Skull23_mskull morphology 23 (mouse)Not determined16577525239775440Mouse
4141010Bbq1_mbrain and behavior QTL 1 (mouse)Not determined16647700935021216Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
4142460Nilac10_mnicotine induced locomotor activity 10 (mouse)Not determined16713690629225471Mouse
11251724Ewc6_methanol withdrawal and consumption 6 (mouse)16822605242226052Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
10043978Obq35_mobesity QTL 35 (mouse)Not determined16988163143881631Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
15092082Igly9_mIgG glycosylation 9, GP17b (mouse)161477522320103513Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse

Markers in Region
D5Mit392.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7A3UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map6F1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic MapXF5UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic MapXF3UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map13A3.1UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map2E1UniSTS
cM Map528.0UniSTS
Whitehead Genetic518.6UniSTS
RH125859  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371618,839,660 - 18,839,875UniSTSGRCm37
MGSCv371618,839,660 - 18,839,867UniSTSGRCm37
Celera1619,413,624 - 19,413,839UniSTS
Celera1619,413,624 - 19,413,831UniSTS
Cytogenetic Map16A3UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000055413   ⟹   ENSMUSP00000060363
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1618,655,328 - 18,658,910 (+)Ensembl
GRCm38.p6 Ensembl1618,836,578 - 18,840,160 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123146   ⟹   ENSMUSP00000140943
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1618,655,331 - 18,656,137 (+)Ensembl
GRCm38.p6 Ensembl1618,836,581 - 18,837,387 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1618,655,405 - 18,658,550 (+)Ensembl
GRCm38.p6 Ensembl1618,836,655 - 18,839,800 (+)Ensembl
RefSeq Acc Id: ENSMUST00000191388   ⟹   ENSMUSP00000141071
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1618,655,331 - 18,658,795 (+)Ensembl
GRCm38.p6 Ensembl1618,836,581 - 18,840,045 (+)Ensembl
RefSeq Acc Id: NM_001033164   ⟹   NP_001028336
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391618,655,330 - 18,658,863 (+)NCBI
GRCm381618,836,580 - 18,840,113 (+)NCBI
MGSCv371618,836,673 - 18,840,206 (+)RGD
Celera1619,410,637 - 19,414,170 (+)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036160137   ⟹   XP_036016030
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391618,655,263 - 18,658,910 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001028336 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016030 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAE32185 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000060363
  ENSMUSP00000060363.7
  ENSMUSP00000140943
  ENSMUSP00000140943.2
  ENSMUSP00000141071.2
GenBank Protein Q3U595 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001028336   ⟸   NM_001033164
- UniProtKB: Q3U595 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000141071   ⟸   ENSMUST00000191388
RefSeq Acc Id: ENSMUSP00000060363   ⟸   ENSMUST00000055413
RefSeq Acc Id: ENSMUSP00000140943   ⟸   ENSMUST00000123146
RefSeq Acc Id: XP_036016030   ⟸   XM_036160137
- Peptide Label: isoform X1
- UniProtKB: A0A087WS89 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3U595-F1-model_v2 AlphaFold Q3U595 1-105 view protein structure

Promoters
RGD ID:8685700
Promoter ID:EPDNEW_M20881
Type:multiple initiation site
Name:2510002D24Rik_1
Description:Mus musculus RIKEN cDNA 2510002D24 gene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381618,836,581 - 18,836,641EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919557 AgrOrtholog
Ensembl Genes ENSMUSG00000071632 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000055413 ENTREZGENE
  ENSMUST00000055413.13 UniProtKB/Swiss-Prot
  ENSMUST00000123146 ENTREZGENE
  ENSMUST00000123146.8 UniProtKB/TrEMBL
  ENSMUST00000191388.2 UniProtKB/TrEMBL
InterPro DUF3128 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72307 UniProtKB/Swiss-Prot
MGD MGI:1919557 ENTREZGENE
NCBI Gene 72307 ENTREZGENE
PANTHER PTHR28052 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPF0545 PROTEIN C22ORF39 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3128 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen 2510002D24Rik PhenoGen
UniProt A0A087WS89 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WSJ3_MOUSE UniProtKB/TrEMBL
  CV039_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE