Arhgef15 (Rho guanine nucleotide exchange factor (GEF) 15) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Arhgef15 (Rho guanine nucleotide exchange factor (GEF) 15) Mus musculus
Analyze
Symbol: Arhgef15
Name: Rho guanine nucleotide exchange factor (GEF) 15
RGD ID: 1617148
MGI Page MGI
Description: Is expressed in embryo. Orthologous to human ARHGEF15 (Rho guanine nucleotide exchange factor 15); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: D130071N09; D530030K12Rik; E5; ephexin-5; MGC102247; MGC144141; MGC144142; rho guanine nucleotide exchange factor 15; RP23-396M19.6
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391168,819,726 - 68,847,760 (-)NCBIGRCm39mm39
GRCm39 Ensembl1168,833,981 - 68,848,306 (-)Ensembl
GRCm381168,928,900 - 68,956,934 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1168,943,155 - 68,957,480 (-)EnsemblGRCm38mm10GRCm38
MGSCv371168,756,656 - 68,770,360 (-)NCBIGRCm37mm9NCBIm37
MGSCv361168,759,349 - 68,773,053 (-)NCBImm8
Celera1175,885,590 - 75,899,659 (-)NCBICelera
Cytogenetic Map11B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15368895   PMID:16141072   PMID:16141073   PMID:18799693   PMID:19501082   PMID:21029865  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:22535667   PMID:23029280   PMID:24003143   PMID:26073538   PMID:27626380   PMID:28185854   PMID:28346227   PMID:30485813   PMID:32325033  


Genomics

Comparative Map Data
Arhgef15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391168,819,726 - 68,847,760 (-)NCBIGRCm39mm39
GRCm39 Ensembl1168,833,981 - 68,848,306 (-)Ensembl
GRCm381168,928,900 - 68,956,934 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1168,943,155 - 68,957,480 (-)EnsemblGRCm38mm10GRCm38
MGSCv371168,756,656 - 68,770,360 (-)NCBIGRCm37mm9NCBIm37
MGSCv361168,759,349 - 68,773,053 (-)NCBImm8
Celera1175,885,590 - 75,899,659 (-)NCBICelera
Cytogenetic Map11B3NCBI
ARHGEF15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl178,310,241 - 8,322,514 (+)EnsemblGRCh38hg38GRCh38
GRCh38178,310,241 - 8,322,516 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37178,213,559 - 8,225,829 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36178,154,315 - 8,166,554 (+)NCBINCBI36hg18NCBI36
Build 34178,154,314 - 8,166,553NCBI
Celera178,244,326 - 8,256,604 (+)NCBI
Cytogenetic Map17p13.1NCBI
HuRef178,108,796 - 8,121,074 (+)NCBIHuRef
CHM1_1178,222,461 - 8,234,738 (+)NCBICHM1_1
Arhgef15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21053,650,521 - 53,662,914 (-)NCBI
Rnor_6.0 Ensembl1055,532,077 - 55,544,429 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01055,532,097 - 55,545,675 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01055,274,558 - 55,288,124 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,703,919 - 55,716,219 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11055,719,072 - 55,729,109 (-)NCBI
Celera1052,816,914 - 52,829,189 (-)NCBICelera
Cytogenetic Map10q24NCBI
Arhgef15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554678,587,873 - 8,602,747 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554678,590,217 - 8,603,778 (-)NCBIChiLan1.0ChiLan1.0
ARHGEF15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11748,070,223 - 48,082,499 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1748,070,223 - 48,082,499 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01743,336,764 - 43,349,787 (-)NCBIMhudiblu_PPA_v0panPan3
ARHGEF15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl533,098,159 - 33,121,083 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1533,096,108 - 33,110,551 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Arhgef15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365951,531,694 - 1,545,206 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGEF15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,495,453 - 53,506,352 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,495,409 - 53,506,373 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,970,955 - 55,981,937 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGEF15
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,674,190 - 7,687,129 (+)NCBI
ChlSab1.1 Ensembl167,674,577 - 7,687,834 (+)Ensembl
Arhgef15
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478610,872,793 - 10,902,948 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1845
Count of miRNA genes:622
Interacting mature miRNAs:809
Transcripts:ENSMUST00000065040, ENSMUST00000108670, ENSMUST00000108671, ENSMUST00000131686, ENSMUST00000141747, ENSMUST00000151520
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001364772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK051749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL603662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY132845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000065040   ⟹   ENSMUSP00000067684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,943,155 - 68,955,074 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108670
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,948,232 - 68,952,174 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108671   ⟹   ENSMUSP00000104311
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,943,157 - 68,957,480 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131686
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,944,527 - 68,947,380 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141747
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,946,447 - 68,947,665 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151520
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,946,301 - 68,947,825 (-)Ensembl
RefSeq Acc Id: NM_001364772   ⟹   NP_001351701
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,713 (-)NCBI
GRCm381168,943,154 - 68,956,887 (-)NCBI
Sequence:
RefSeq Acc Id: NM_177566   ⟹   NP_808234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,713 (-)NCBI
GRCm381168,943,154 - 68,956,887 (-)NCBI
MGSCv371168,756,656 - 68,770,360 (-)RGD
Celera1175,885,590 - 75,899,659 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533664   ⟹   XP_006533727
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533669   ⟹   XP_006533732
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,837,434 - 68,847,760 (-)NCBI
GRCm381168,946,608 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249112   ⟹   XP_011247414
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,726 - 68,847,760 (-)NCBI
GRCm381168,928,900 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249114   ⟹   XP_011247416
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,991 - 68,847,760 (-)NCBI
GRCm381168,929,165 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249115   ⟹   XP_011247417
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249116   ⟹   XP_011247418
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249117   ⟹   XP_011247419
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,991 - 68,847,760 (-)NCBI
GRCm381168,929,165 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249118   ⟹   XP_011247420
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,726 - 68,847,760 (-)NCBI
GRCm381168,929,017 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249119   ⟹   XP_011247421
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,991 - 68,847,760 (-)NCBI
GRCm381168,929,165 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249120   ⟹   XP_011247422
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249121   ⟹   XP_011247423
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,825,160 - 68,847,760 (-)NCBI
GRCm381168,934,334 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249122   ⟹   XP_011247424
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,726 - 68,847,760 (-)NCBI
GRCm381168,934,326 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314643   ⟹   XP_017170132
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246113   ⟹   XP_030101973
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,991 - 68,847,760 (-)NCBI
GRCm381168,929,165 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246114   ⟹   XP_030101974
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246115   ⟹   XP_030101975
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780023
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949471
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388487
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388488
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,833,980 - 68,847,760 (-)NCBI
GRCm381168,943,154 - 68,956,934 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879714
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391168,819,726 - 68,847,760 (-)NCBI
GRCm381168,933,065 - 68,956,934 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_808234   ⟸   NM_177566
- Peptide Label: isoform 1
- UniProtKB: Q5FWH6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533727   ⟸   XM_006533664
- Peptide Label: isoform X5
- UniProtKB: Q5FWH6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533732   ⟸   XM_006533669
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_011247414   ⟸   XM_011249112
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011247420   ⟸   XM_011249118
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011247419   ⟸   XM_011249117
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011247421   ⟸   XM_011249119
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_011247416   ⟸   XM_011249114
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011247424   ⟸   XM_011249122
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_011247423   ⟸   XM_011249121
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_011247422   ⟸   XM_011249120
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_011247418   ⟸   XM_011249116
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011247417   ⟸   XM_011249115
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017170132   ⟸   XM_017314643
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_030101973   ⟸   XM_030246113
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030101975   ⟸   XM_030246115
- Peptide Label: isoform X13
RefSeq Acc Id: XP_030101974   ⟸   XM_030246114
- Peptide Label: isoform X11
RefSeq Acc Id: NP_001351701   ⟸   NM_001364772
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000067684   ⟸   ENSMUST00000065040
RefSeq Acc Id: ENSMUSP00000104311   ⟸   ENSMUST00000108671
Protein Domains
DH

Promoters
RGD ID:6820413
Promoter ID:MM_KWN:8006
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:UC007JOM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361168,769,261 - 68,769,761 (-)MPROMDB
RGD ID:6820412
Promoter ID:MM_KWN:8007
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:NM_177566
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361168,770,111 - 68,770,611 (-)MPROMDB
RGD ID:8675126
Promoter ID:EPDNEW_M15594
Type:multiple initiation site
Name:Arhgef15_1
Description:Mus musculus Rho guanine nucleotide exchange factor 15 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381168,956,887 - 68,956,947EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3045246 AgrOrtholog
Ensembl Genes ENSMUSG00000052921 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000067684 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000104311 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000065040 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000108671 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.900.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro DBL_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:442801 UniProtKB/Swiss-Prot
MGD MGI:3045246 ENTREZGENE
NCBI Gene 442801 ENTREZGENE
Pfam RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arhgef15 PhenoGen
PROSITE DH_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RhoGEF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48065 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ARHGF_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BII0_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q14B44 UniProtKB/Swiss-Prot
  Q69ZV7 UniProtKB/Swiss-Prot