Klf12 (Kruppel-like transcription factor 12) - Rat Genome Database

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Gene: Klf12 (Kruppel-like transcription factor 12) Mus musculus
Analyze
Symbol: Klf12
Name: Kruppel-like transcription factor 12
RGD ID: 1616852
MGI Page MGI
Description: Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Is expressed in several structures, including branchial arch; central nervous system; early conceptus; genitourinary system; and sensory organ. Orthologous to human KLF12 (KLF transcription factor 12).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2700063E05Rik; AI225908; AI315654; AP-; AP-2rep; B130052C06Rik; D530033K05Rik; Krueppel-like factor 12; Kruppel-like factor 12; transcriptional repressor AP-2rep
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914100,103,617 - 100,719,681 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14100,108,068 - 100,522,115 (-)EnsemblGRCm39 Ensembl
GRCm381499,866,181 - 100,285,891 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,870,632 - 100,284,679 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714100,269,851 - 100,549,015 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361498,753,766 - 99,032,930 (-)NCBIMGSCv36mm8
Celera1498,543,645 - 98,822,073 (-)NCBICelera
Cytogenetic Map14E2.2- E2.3NCBI
cM Map1450.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
acetamide  (ISO)
acrylamide  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amphetamine  (ISO)
amphotericin B  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
beauvericin  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
butanal  (ISO)
carbon nanotube  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
coumestrol  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (EXP,ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
enniatin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
geldanamycin  (ISO)
gentamycin  (ISO)
Heptachlor epoxide  (EXP)
leflunomide  (EXP)
lipopolysaccharide  (ISO)
melphalan  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodiethylamine  (EXP)
nitrofen  (ISO)
O-methyleugenol  (ISO)
paracetamol  (ISO)
PCB138  (EXP)
permethrin  (ISO)
phenobarbital  (EXP)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP)
rofecoxib  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP,ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (EXP)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tremolite asbestos  (EXP)
troglitazone  (EXP)
valproic acid  (ISO)
vancomycin  (EXP)
versicolorin A  (ISO)
vincristine  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9858544   PMID:10349636   PMID:10366853   PMID:10512203   PMID:10704285   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:14610273   PMID:15618518   PMID:15820306   PMID:15840001   PMID:16141072   PMID:16141073   PMID:16615998   PMID:17967808   PMID:18287559   PMID:18799693  
PMID:20059953   PMID:20412781   PMID:20599664   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22955271   PMID:22988430   PMID:23604909   PMID:24633789   PMID:25715395   PMID:29475398  
PMID:31300511   PMID:32325033   PMID:34104947   PMID:37606530  


Genomics

Comparative Map Data
Klf12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914100,103,617 - 100,719,681 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14100,108,068 - 100,522,115 (-)EnsemblGRCm39 Ensembl
GRCm381499,866,181 - 100,285,891 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,870,632 - 100,284,679 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714100,269,851 - 100,549,015 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361498,753,766 - 99,032,930 (-)NCBIMGSCv36mm8
Celera1498,543,645 - 98,822,073 (-)NCBICelera
Cytogenetic Map14E2.2- E2.3NCBI
cM Map1450.9NCBI
KLF12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381373,686,089 - 74,306,045 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1373,686,089 - 74,134,404 (-)EnsemblGRCh38hg38GRCh38
GRCh371374,260,226 - 74,880,182 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361373,158,150 - 73,606,067 (-)NCBINCBI36Build 36hg18NCBI36
Build 341373,284,706 - 73,606,043NCBI
Celera1355,158,964 - 55,607,803 (-)NCBICelera
Cytogenetic Map13q22.1NCBI
HuRef1354,957,615 - 55,405,960 (-)NCBIHuRef
CHM1_11374,227,338 - 74,675,586 (-)NCBICHM1_1
T2T-CHM13v2.01372,907,694 - 73,528,039 (-)NCBIT2T-CHM13v2.0
Klf12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81583,037,548 - 83,469,998 (-)NCBIGRCr8
mRatBN7.21576,628,778 - 77,062,000 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1576,637,654 - 77,062,056 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1580,623,760 - 80,973,738 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01581,700,349 - 82,050,323 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01578,647,950 - 78,997,925 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01584,316,986 - 84,748,549 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1584,324,470 - 84,748,525 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01588,087,725 - 88,517,300 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41583,686,143 - 84,046,291 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11583,824,681 - 83,885,689 (-)NCBI
Celera1575,877,048 - 76,225,583 (-)NCBICelera
Cytogenetic Map15q21NCBI
Klf12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540432,854,754 - 33,118,361 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540432,715,636 - 33,127,525 (+)NCBIChiLan1.0ChiLan1.0
KLF12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21475,267,675 - 75,717,201 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11373,867,629 - 74,309,095 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01354,916,443 - 55,535,131 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11373,688,429 - 74,136,126 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1373,697,912 - 73,996,956 (-)Ensemblpanpan1.1panPan2
KLF12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12227,695,017 - 28,264,813 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2227,704,686 - 28,123,099 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2227,545,323 - 28,120,406 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02228,028,356 - 28,604,139 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2228,042,396 - 28,462,397 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12227,683,490 - 28,257,505 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02227,722,157 - 28,312,161 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02227,794,427 - 28,385,703 (-)NCBIUU_Cfam_GSD_1.0
Klf12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945131,272,121 - 131,875,349 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365116,854,995 - 7,283,347 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365116,992,131 - 7,292,484 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLF12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1145,985,564 - 46,459,791 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11145,981,096 - 46,655,472 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21150,573,347 - 50,616,802 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KLF12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1352,817,588 - 53,153,414 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660468,926,353 - 9,374,326 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Klf12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475126,508,490 - 26,798,125 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475126,363,475 - 26,807,430 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Klf12
23264 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:215
Count of miRNA genes:191
Interacting mature miRNAs:200
Transcripts:ENSMUST00000097079
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
13524530Bodwtq11_mbody wweight QTL 11 (mouse)1487767629102538219Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse

Markers in Region
RH136003  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,870,669 - 99,870,884UniSTSGRCm38
MGSCv3714100,269,888 - 100,270,103UniSTSGRCm37
Celera1498,543,682 - 98,543,897UniSTS
Cytogenetic Map14E2.2UniSTS
D14Mit104  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,975,602 - 99,975,729UniSTSGRCm38
MGSCv3714100,374,821 - 100,374,948UniSTSGRCm37
Celera1498,648,502 - 98,648,629UniSTS
Cytogenetic Map14E2.2UniSTS
cM Map1447.0UniSTS
Whitehead Genetic1457.9UniSTS
Whitehead/MRC_RH141039.35UniSTS
Whitehead_YAC14 UniSTS
D14Mit144  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,924,828 - 99,925,025UniSTSGRCm38
MGSCv3714100,324,047 - 100,324,244UniSTSGRCm37
Celera1498,597,646 - 98,597,841UniSTS
Cytogenetic Map14E2.2UniSTS
cM Map1447.0UniSTS
Whitehead Genetic1457.9UniSTS
Whitehead/MRC_RH141041.78UniSTS
Whitehead_YAC14 UniSTS
D14Mit264.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,955,814 - 99,955,951UniSTSGRCm38
MGSCv3714100,355,033 - 100,355,170UniSTSGRCm37
Celera1498,628,544 - 98,628,681UniSTS
Cytogenetic Map14E2.2UniSTS
cM Map1447.0UniSTS
cM Map14 UniSTS
Whitehead Genetic1456.8UniSTS
AI315654  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381499,870,877 - 99,871,113UniSTSGRCm38
MGSCv3714100,270,096 - 100,270,332UniSTSGRCm37
Celera1498,543,890 - 98,544,126UniSTS
Cytogenetic Map14E2.2UniSTS
Whitehead/MRC_RH141044.12UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001411709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB221575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC113486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC067408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y14295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000097079   ⟹   ENSMUSP00000094844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,111,922 - 100,387,200 (-)Ensembl
GRCm38.p6 Ensembl1499,874,486 - 100,149,764 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226205
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,137,637 - 100,181,144 (-)Ensembl
GRCm38.p6 Ensembl1499,900,201 - 99,943,708 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226544
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,486,045 - 100,521,964 (-)Ensembl
GRCm38.p6 Ensembl14100,248,609 - 100,284,528 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226774   ⟹   ENSMUSP00000153987
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,260,268 - 100,521,920 (-)Ensembl
GRCm38.p6 Ensembl14100,022,832 - 100,284,484 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228216   ⟹   ENSMUSP00000153901
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,108,068 - 100,522,115 (-)Ensembl
GRCm38.p6 Ensembl1499,870,632 - 100,284,679 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14100,111,924 - 100,137,827 (-)Ensembl
GRCm38.p6 Ensembl1499,874,488 - 99,900,391 (-)Ensembl
RefSeq Acc Id: NM_001411709   ⟹   NP_001398638
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,153 (-)NCBI
RefSeq Acc Id: NM_010636   ⟹   NP_034766
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,521,924 (-)NCBI
GRCm381499,870,632 - 100,149,796 (-)NCBI
MGSCv3714100,269,851 - 100,549,015 (-)RGD
Celera1498,543,645 - 98,822,073 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006518625   ⟹   XP_006518688
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
GRCm381499,866,181 - 100,284,833 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244968   ⟹   XP_011243270
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,422,309 (-)NCBI
GRCm381499,866,181 - 100,174,561 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244970   ⟹   XP_011243272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,422,309 (-)NCBI
GRCm381499,866,181 - 100,174,561 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244971   ⟹   XP_011243273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
GRCm381499,866,181 - 100,285,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017315889   ⟹   XP_017171378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
GRCm381499,866,181 - 100,284,833 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247662   ⟹   XP_030103522
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
GRCm381499,866,181 - 100,284,833 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247664   ⟹   XP_030103524
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
GRCm381499,866,181 - 100,285,891 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158485   ⟹   XP_036014378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158486   ⟹   XP_036014379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,719,681 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158487   ⟹   XP_036014380
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158488   ⟹   XP_036014381
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158489   ⟹   XP_036014382
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158490   ⟹   XP_036014383
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,103,617 - 100,522,818 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158491   ⟹   XP_036014384
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,217,484 - 100,522,511 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158492   ⟹   XP_036014385
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914100,224,863 - 100,522,511 (-)NCBI
Sequence:
RefSeq Acc Id: NP_034766   ⟸   NM_010636
- UniProtKB: Q6NWV9 (UniProtKB/Swiss-Prot),   O35738 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006518688   ⟸   XM_006518625
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243273   ⟸   XM_011244971
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243272   ⟸   XM_011244970
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011243270   ⟸   XM_011244968
- Peptide Label: isoform X1
- UniProtKB: Q6NWV9 (UniProtKB/Swiss-Prot),   O35738 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017171378   ⟸   XM_017315889
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_030103524   ⟸   XM_030247664
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030103522   ⟸   XM_030247662
- Peptide Label: isoform X4
RefSeq Acc Id: ENSMUSP00000153901   ⟸   ENSMUST00000228216
RefSeq Acc Id: ENSMUSP00000153987   ⟸   ENSMUST00000226774
RefSeq Acc Id: ENSMUSP00000094844   ⟸   ENSMUST00000097079
RefSeq Acc Id: XP_036014379   ⟸   XM_036158486
- Peptide Label: isoform X1
- UniProtKB: O35738 (UniProtKB/Swiss-Prot),   Q6NWV9 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036014383   ⟸   XM_036158490
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036014381   ⟸   XM_036158488
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036014378   ⟸   XM_036158485
- Peptide Label: isoform X1
- UniProtKB: O35738 (UniProtKB/Swiss-Prot),   Q6NWV9 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036014382   ⟸   XM_036158489
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036014380   ⟸   XM_036158487
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036014384   ⟸   XM_036158491
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036014385   ⟸   XM_036158492
- Peptide Label: isoform X6
RefSeq Acc Id: NP_001398638   ⟸   NM_001411709
- UniProtKB: O35738 (UniProtKB/Swiss-Prot),   Q6NWV9 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35738-F1-model_v2 AlphaFold O35738 1-402 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1333796 AgrOrtholog
Ensembl Genes ENSMUSG00000072294 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000097079 ENTREZGENE
  ENSMUST00000097079.5 UniProtKB/Swiss-Prot
  ENSMUST00000226774.2 UniProtKB/TrEMBL
  ENSMUST00000228216 ENTREZGENE
  ENSMUST00000228216.2 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report mmu:16597 UniProtKB/Swiss-Prot
MGD MGI:1333796 ENTREZGENE
NCBI Gene 16597 ENTREZGENE
PANTHER KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/Swiss-Prot
  PTHR23235:SF56 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Klf12 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt A0A2I3BQ01_MOUSE UniProtKB/TrEMBL
  KLF12_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q6NWV9 ENTREZGENE
UniProt Secondary Q6NWV9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 Klf12  Kruppel-like transcription factor 12  Klf12  Kruppel-like factor 12  Symbol and/or name change 5135510 APPROVED