Tex264 (testis expressed gene 264) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tex264 (testis expressed gene 264) Mus musculus
Analyze
Symbol: Tex264
Name: testis expressed gene 264
RGD ID: 1616823
MGI Page MGI
Description: Predicted to have signaling receptor activity. Predicted to be involved in reticulophagy. Localizes to autophagosome membrane and endoplasmic reticulum. Orthologous to human TEX264 (testis expressed 264, ER-phagy receptor); INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: TEG-264; testis-expressed protein 264; testis-expressed protein 264 homolog
RGD Orthologs
Human
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,535,945 - 106,563,151 (-)NCBIGRCm39mm39
GRCm389106,658,746 - 106,685,952 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,658,746 - 106,685,927 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,561,077 - 106,588,279 (-)NCBIGRCm37mm9NCBIm37
MGSCv369106,516,854 - 106,543,768 (-)NCBImm8
Celera9106,279,768 - 106,306,773 (-)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8703127   PMID:8889548   PMID:9464256   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932  
PMID:12520002   PMID:14610273   PMID:15010206   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17015433   PMID:18799693   PMID:21267068   PMID:31006538  


Genomics

Comparative Map Data
Tex264
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,535,945 - 106,563,151 (-)NCBIGRCm39mm39
GRCm389106,658,746 - 106,685,952 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,658,746 - 106,685,927 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,561,077 - 106,588,279 (-)NCBIGRCm37mm9NCBIm37
MGSCv369106,516,854 - 106,543,768 (-)NCBImm8
Celera9106,279,768 - 106,306,773 (-)NCBICelera
Cytogenetic Map9F1NCBI
TEX264
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl351,662,693 - 51,704,323 (+)EnsemblGRCh38hg38GRCh38
GRCh38351,671,252 - 51,704,323 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37351,705,191 - 51,738,339 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,680,330 - 51,713,377 (+)NCBINCBI36hg18NCBI36
Build 34351,680,329 - 51,713,377NCBI
Celera351,682,990 - 51,716,106 (+)NCBI
Cytogenetic Map3p21.2NCBI
HuRef351,767,017 - 51,800,094 (+)NCBIHuRef
CHM1_1351,657,456 - 51,691,164 (+)NCBICHM1_1
Tex264
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08115,360,706 - 115,388,299 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,360,713 - 115,388,266 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,720,830 - 114,748,380 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,852,793 - 111,879,691 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18111,872,248 - 111,899,146 (-)NCBI
Celera8106,607,749 - 106,634,618 (-)NCBICelera
Cytogenetic Map8q32NCBI
Tex264
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,280,372 - 3,305,760 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,278,214 - 3,306,045 (+)NCBIChiLan1.0ChiLan1.0
TEX264
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2037,928,953 - 37,955,993 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12037,928,952 - 37,959,382 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tex264
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365293,008,355 - 3,039,537 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEX264
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1333,771,816 - 33,926,156 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11333,892,557 - 33,924,175 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,080,118 - 37,127,975 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TEX264
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,008,961 - 13,042,296 (+)NCBI
ChlSab1.1 Ensembl2213,012,079 - 13,041,993 (+)Ensembl
Tex264
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247305,387,697 - 5,416,924 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:639
Count of miRNA genes:189
Interacting mature miRNAs:215
Transcripts:ENSMUST00000046735, ENSMUST00000163441, ENSMUST00000169068
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB860146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM203866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU700575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY096844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY331401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX220909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV656490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV661702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X80427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X80428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000046735   ⟹   ENSMUSP00000044654
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,658,752 - 106,685,915 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163441   ⟹   ENSMUSP00000132247
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,658,746 - 106,685,823 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169068   ⟹   ENSMUSP00000133194
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,658,746 - 106,685,682 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185257
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,659,048 - 106,685,919 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185645
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,684,929 - 106,685,903 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188120
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,662,390 - 106,685,909 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188892
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,659,237 - 106,685,927 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190948
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,677,994 - 106,685,305 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191205
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,658,992 - 106,663,957 (-)Ensembl
RefSeq Acc Id: ENSMUST00000214885
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,662,376 - 106,685,302 (-)Ensembl
RefSeq Acc Id: NM_001081654   ⟹   NP_001075123
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,535,945 - 106,563,151 (-)NCBI
GRCm389106,658,746 - 106,685,952 (-)NCBI
MGSCv379106,561,077 - 106,588,279 (-)RGD
Celera9106,279,768 - 106,306,777 (-)NCBI
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001286498   ⟹   NP_001273427
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,535,945 - 106,563,151 (-)NCBI
GRCm389106,658,746 - 106,685,952 (-)NCBI
Celera9106,279,768 - 106,306,777 (-)NCBI
Sequence:
RefSeq Acc Id: NM_011573   ⟹   NP_035703
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,535,945 - 106,563,015 (-)NCBI
GRCm389106,658,746 - 106,685,816 (-)NCBI
MGSCv379106,561,077 - 106,588,279 (-)RGD
Celera9106,279,768 - 106,306,777 (-)NCBI
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_104459
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,535,945 - 106,563,151 (-)NCBI
GRCm389106,658,746 - 106,685,952 (-)NCBI
Celera9106,279,768 - 106,306,777 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001075123   ⟸   NM_001081654
- UniProtKB: E9Q137 (UniProtKB/TrEMBL),   Q9D7D9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_035703   ⟸   NM_011573
- UniProtKB: Q3TXY2 (UniProtKB/TrEMBL),   Q9D7D9 (UniProtKB/TrEMBL),   E9Q137 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273427   ⟸   NM_001286498
- UniProtKB: E9Q137 (UniProtKB/TrEMBL),   Q3TXY2 (UniProtKB/TrEMBL),   Q9D7D9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000044654   ⟸   ENSMUST00000046735
RefSeq Acc Id: ENSMUSP00000132247   ⟸   ENSMUST00000163441
RefSeq Acc Id: ENSMUSP00000133194   ⟸   ENSMUST00000169068

Promoters
RGD ID:6848485
Promoter ID:MM_ACW:51913
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:TEX264.JSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369106,566,566 - 106,567,066 (-)MPROMDB
RGD ID:6845239
Promoter ID:MM_KWN:58687
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:NM_001081654,   NM_011573,   UC009RKL.1,   UC009RKM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369106,587,496 - 106,588,807 (-)MPROMDB
RGD ID:8670756
Promoter ID:EPDNEW_M13409
Type:initiation region
Name:Tex264_1
Description:Mus musculus testis expressed gene 264 , transcript variant 4,non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389106,685,905 - 106,685,965EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1096570 AgrOrtholog
Ensembl Genes ENSMUSG00000040813 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000044654 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000132247 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133194 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000046735 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000163441 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000169068 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.20.80.10 UniProtKB/Swiss-Prot
InterPro Reg_factor_effector_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:21767 UniProtKB/Swiss-Prot
MGD MGI:1096570 ENTREZGENE
NCBI Gene 21767 ENTREZGENE
PhenoGen Tex264 PhenoGen
Superfamily-SCOP SSF55136 UniProtKB/Swiss-Prot
UniGene Mm.22266 ENTREZGENE
UniProt E9Q137 ENTREZGENE
  Q3TXY2 ENTREZGENE
  Q62303_MOUSE UniProtKB/TrEMBL
  Q9D7D9 ENTREZGENE
  TX264_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TXY2 UniProtKB/Swiss-Prot
  Q99LS5 UniProtKB/Swiss-Prot
  Q9D7D9 UniProtKB/Swiss-Prot