Zdhhc11 (zinc finger, DHHC domain containing 11)

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Gene: Zdhhc11 (zinc finger, DHHC domain containing 11) Mus musculus

Analyze

Symbol:

Zdhhc11

Name:

zinc finger, DHHC domain containing 11

RGD ID:

1616743

MGI Page

MGI

Description:

Enables protein-cysteine S-palmitoyltransferase activity. Involved in antiviral innate immune response; peptidyl-L-cysteine S-palmitoylation; and positive regulation of defense response to virus by host. Located in endosome membrane. Is expressed in brain; male reproductive gland or organ; metanephros; and submandibular gland. Orthologous to several human genes including ZDHHC11B (zinc finger DHHC-type containing 11B).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4933421L13Rik; DHHC-11; DHHC-containing protein 10; DHHC10(z11); MGC151180; MGC151184; palmitoyltransferase ZDHHC11; probable palmitoyltransferase ZDHHC11; Zdhhc20; zinc finger DHHC domain-containing protein 11; zinc finger, DHHC domain containing 20

RGD Orthologs

Human

Dog

Pig

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZDHHC11B (zinc finger DHHC-type containing 11B)	HGNC	EggNOG, Ensembl, HGNC, Inparanoid, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Canis lupus familiaris (dog):	LOC609445 (palmitoyltransferase ZDHHC11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LOC110257285 (uncharacterized LOC110257285)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ZDHHC11 (zinc finger DHHC-type containing 11)	HGNC	Ensembl, HGNC, HomoloGene, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB
Homo sapiens (human):	ZDHHC1 (zinc finger DHHC-type containing 1)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	ZDHHC11 (zinc finger DHHC-type containing 11)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Zdhhc11 (zinc finger, DHHC-type containing 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ZDHHC11B (zinc finger DHHC-type containing 11B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zdhhc11 (zinc finger, DHHC-type containing 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	CG17075	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	dhhc-11	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,111,970 - 74,141,109 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,111,970 - 74,141,109 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	73,963,851 - 73,992,990 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	73,963,851 - 73,992,990 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,101,310 - 74,130,288 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,429,855 - 74,458,140 (+)	NCBI		MGSCv36	mm8
Celera	13	76,293,444 - 76,322,624 (+)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 2 (ISO)

COVID-19 (ISO)

idiopathic pulmonary fibrosis (ISO)

Parkinsonism-Dystonia, Infantile (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

clothianidin (ISO)

epoxiconazole (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antiviral innate immune response (IMP)

peptidyl-L-cysteine S-palmitoylation (IBA,IDA)

positive regulation of defense response to virus by host (IMP)

protein targeting to membrane (IBA)

Cellular Component

endoplasmic reticulum (IBA,ISO)

endosome (IEA)

endosome membrane (IDA)

Golgi apparatus (IBA)

membrane (IEA)

Molecular Function

acyltransferase activity (IEA)

palmitoyltransferase activity (IEA)

protein-cysteine S-palmitoyltransferase activity (IBA,IDA)

signaling adaptor activity (ISO)

transferase activity (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal auditory brainstem response (IEA)

decreased circulating interleukin-6 level (IAGP)

decreased susceptibility to endotoxin shock (IAGP)

decreased susceptibility to viral infection (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:20562862	PMID:21873635	PMID:23687301	PMID:24194600
PMID:27626380	PMID:28700664	PMID:29429998	PMID:34490261	PMID:34897408	PMID:35384384

Genomics

Comparative Map Data

Zdhhc11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,111,970 - 74,141,109 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,111,970 - 74,141,109 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	73,963,851 - 73,992,990 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	73,963,851 - 73,992,990 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,101,310 - 74,130,288 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,429,855 - 74,458,140 (+)	NCBI		MGSCv36	mm8
Celera	13	76,293,444 - 76,322,624 (+)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI

ZDHHC11B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	710,355 - 784,729 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	5	710,355 - 784,729 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	710,470 - 784,844 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	769,818 - 820,066 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Cytogenetic Map	5	p15.33	NCBI
HuRef	5	716,388 - 752,332 (-)	NCBI		HuRef
CHM1_1	5	706,398 - 755,923 (-)	NCBI		CHM1_1

LOC609445
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,567,784 - 11,614,975 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	16,080,852 - 16,124,884 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,471,765 - 11,515,571 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	34	11,522,312 - 11,570,448 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,502,246 - 11,550,175 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,713,120 - 11,761,000 (+)	NCBI		UU_Cfam_GSD_1.0

LOC110257285
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	16	79,501,510 - 79,528,010 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	118
Count of miRNA genes:	108
Interacting mature miRNAs:	114
Transcripts:	ENSMUST00000091493
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
4142147	Mvwf4_m	modifier of von Willebrand factor 4 (mouse)			Not determined			20477612	112898424	Mouse
10412235	Scgq5_m	spontaneous crescentic glomerulonephritis QTL 5 (mouse)			Not determined		13	36060908	96239162	Mouse
15039353	Nmrs35_m	NAFLD-associated magnetic resonance shift 35 (mouse)					13	40588253	74588253	Mouse
1300668	Pas10_m	pulmonary adenoma susceptibility 10 (mouse)			Not determined		13	41489042	75489158	Mouse
4142331	Bxs6_m	BXSB/MpJ autoimmune nephritis 6 (mouse)			Not determined			45210442	83744746	Mouse
10412109	Bxs7_m	BXSB/MpJ autoimmune nephritis 7 (mouse)			Not determined		13	45210442	83744746	Mouse
4142372	Moo2_m	modifier of Odc2 (mouse)			Not determined		X	50318411	84318559	Mouse
1301666	Eae13_m	susceptibility to experimental allergic encephalomyelitis 13 (mouse)			Not determined		13	50318411	84318559	Mouse
1300573	Elsgp2_m	elevated serum gp70 2 (mouse)			Not determined		13	50616828	84617027	Mouse
14746975	Manh74_m	mandible shape 74 (mouse)					13	52477269	86477269	Mouse
1302073	Pgct1_m	primordial germ cell tumor locus 1 (mouse)			Not determined		13	53820783	87820897	Mouse
1357563	Bmch6_m	bone mechanical trait 6 (mouse)			Not determined		13	55384980	89385140	Mouse
4142314	Tailaq3_m	tail length adjusted QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
4140959	W10q17_m	weight 10 weeks QTL 17 (mouse)			Not determined			55720354	112431103	Mouse
4141992	W6q16_m	weight 6 weeks QTL 16 (mouse)			Not determined			55720354	112431103	Mouse
4142241	Tailq3_m	tail length QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
1558850	Sgp3_m	serum gp70 production 3 (mouse)			Not determined		13	56470456	76971314	Mouse
10402414	Sgp5_m	serum gp70 production 5 (mouse)			Not determined		13	56470456	105422186	Mouse
1357553	Cia28_m	collagen induced arthritis 28 (mouse)			Not determined		13	56629249	96239162	Mouse
10412163	Wra1_m	wheel running activity 1 (mouse)			Not determined		13	59132600	93132738	Mouse
1300941	Skl6_m	skeletal size (tail length) 6 (mouse)			Not determined		13	64250821	98250945	Mouse
1301949	Skull20_m	skull morphology 20 (mouse)			Not determined		13	64250821	98250945	Mouse
1301445	Listr2_m	listeriosis resistance 2 (mouse)			Not determined		13	66744601	100744746	Mouse
1301593	Heal8_m	wound healing/regeneration 8 (mouse)			Not determined		13	68053999	102054119	Mouse
14696726	Kidrq3_m	kidney weight, right QTL 3 (mouse)					13	68217066	102217066	Mouse
14747007	Mancz11_m	mandible centroid size 11 (mouse)					13	70111284	104111284	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_027704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_153830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006517377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK016865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY668948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB012497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC116807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC144831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC144832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT010471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000091493 ⟹ ENSMUSP00000089075

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	74,111,972 - 74,141,109 (+)	Ensembl
GRCm38.p6 Ensembl	13	73,963,853 - 73,992,990 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222487 ⟹ ENSMUSP00000152197

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	74,111,970 - 74,141,108 (+)	Ensembl
GRCm38.p6 Ensembl	13	73,963,851 - 73,992,989 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000222951 ⟹ ENSMUSP00000152788

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	74,111,981 - 74,140,959 (+)	Ensembl
GRCm38.p6 Ensembl	13	73,963,862 - 73,992,840 (+)	Ensembl

RefSeq Acc Id:

NM_027704 ⟹ NP_081980

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,111,970 - 74,141,109 (+)	NCBI
GRCm38	13	73,963,851 - 73,992,990 (+)	NCBI
MGSCv37	13	74,101,310 - 74,130,288 (+)	RGD
Celera	13	76,293,444 - 76,322,624 (+)	RGD
cM Map	13		ENTREZGENE

Sequence:

show sequence

GCTTTGTTCGTGGGAACGCCCTACCACTGTTTAACATGTCAGCACTGAGCAAGAAGTGCTGTTC
AACCTGATGAAAGAGATGAACATCTGTGGCATCAACAAGAACTGGGTCCTCCCAGAAGCCCAGG
AAAACAATGTGAAGAAGTTCCTACCACGCCCTCTGTCTAGGGTGAATGGCTGGTCACCACCCCT
CCACTCCTTTCAGGCAATATCCTGGATCACCTACCTGGCCATGTCCATTGTCACCTTTGGGATC
TTCATCCCCTTTCTGCCATATAGCTGGAAATATGCTGCCAATATTGTGATGGGTGGGGTGTTCA
TATTCCACCTCATCGTGCACTTGATCGCAATTACCATCGATCCAGCTGACACCAATGTCCGACT
CAAAAAGGACTACACGCAGCCTGTGCCGGCCTTCGACAGGTCCAAACACACACACGTGATTCAG
AACCAGTACTGCCACCTGTGTGAGGTTACCGCGAGCAAAAAAGCCAAACATTGCAGCGCCTGCA
ACAAATGTGTCTCTGGCTTTGACCACCACTGCAAATGGCTGAACAACTGCGTGGGCAGGAGAAA
CTACTGGTTCTTTTTCTGGTCTGTGGCCTCAGCTGCAGTTGGGATTCTTGGTGTGATGATTATC
TTGTGTTATATCTGCATCCAGTACTTTGTCAACCCTGATGAGCTTCGCACGGATCCTCTCTATA
AAGAGATCATCTCTGAGAACACATGGCTGCTGTTCCTCTCACTGTGGCCTGTGCCTGTGAAGAC
CCCCATAGTCCTTTCCATCGCGGTGATGGCACTGCTACTAGCTATTGCCAGCTTCGTGATGCTT
GGGCACCTCCTCATCTTCCACTTATACCTGATTACTAAGAATATGAGCACATTTGACTACCTGA
TGAAGACTCGATTCAAGAAGAATTTACATCCAGCAGAGGAGAAAGAGCTACCTCTACAGAAGAA
GGGGGACCTTCCCCAGGAAAAGAGTGACAACTGGGCCTGGCCGAAGTCCCCACCCAGAGTGGGG
TCCCAGAAGTTCCCAGTGTCTACTCTTTCGCCGAAGTCAAGTGTGTGTTTTGTGGCTTCACCTC
CAAAGATCTGCCACAGTGAAGACTAGTGGCAAGGATGAGCCCTTCTTTCATCATGGAAACACCA
AGGTATCAGCCCAAGATCATGAGGAGACCCTTCTACTCTGTGGTGCATGATGCTGCTGAGCCAT
GATCTTCAGTAGAATATGTGTATTATGTGTATTTTGGACTTAAGATATTTTCAATTTATGATGA
GTTCCTCAGAATGCAAAGCCGTTGTCATCCAAGAATCATCTATATAGAAGAATGTTAGCAGTAA
TAGAGTCTAGGTGTTAAGTACATATGCATTTTCACTTTCAACTTTTCTAGATGTTTGAAAATTT
TCATAATAAAATGTTGATGTATGACTTGGTAAAAATAAACATGGCAAAAGTTCA

hide sequence

RefSeq Acc Id:

NR_153830

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,111,970 - 74,141,109 (+)	NCBI
GRCm38	13	73,963,851 - 73,992,990 (+)	NCBI

Sequence:

show sequence

GCTTTGTTCGTGGGAACGCCCTACCACTGTTTAACATGTCAGCACTGAGCAAGAAGTGCTGTTC
AACCTGATGAAAGAGATGAACATCTGTGGCATCAACAAGAACTGGGTCCTCCCAGAAGCCCAGG
AAAACAATGTGAAGAAGTTCCTACCACGCCCTCTGTCTAGGGTGAATGGCTGGTCACCACCCCT
CCACTCCTTTCAGGCAATATCCTGGATCACCTACCTGGCCATGTCCATTGTCACCTTTGGGATC
TTCATCCCCTTTCTGCCATATAGCTGGAAATATGCTGCCAATATTGTGATGGGTGGGGTGTTCA
TATTCCACCTCATCGTGCACTTGATCGCAATTACCATCGATCCAGCTGACACCAATGTCCGACT
CAAAAAGGACTACACGCAGCCTGTGCCGGCCTTCGACAGGTCCAAACACACACACGTGATTCAG
AACCAGTACTGCCACCTGTGTGAGGTTACCGCGAGCAAAAAAGCCAAACATTGCAGCGCCTGCA
ACAAATGTGTCTCTGGCTTTGACCACCACTGCAAATGGCTGAACAACTGCGTGGGCAGGAGAAA
CTACTGGTTCTTTTTCTGGTCTGTGGCCTCAGCTGCAGTTGGGATTCTTGGTGTGATGATTATC
TTGTGTTATATCTGCATCCAGTACTTTGTCAACCCTGATGAGCTTCGCACGGATCCTCTCTATA
AAGAGATCATCTCTGAGAACACATGGCTGCTGTTCCTCTCACTGTGGCCTGTGCCTGTGAAGAC
CCCCATAGTCCTTTCCATCGCGGTGATGGCACTGCTACTAGCTATTGCCAGCTTCGTGATGCTT
GGGCACCTCCTCATCTTCCACTTATACCTGATTACTAAGAATATGAGCACATTTGACTACCTGA
TGAAGACTCGATTCAAGAAGAATTTACATCCAGCAGAGGAGAAAGAGCTACCTCTACAGAAGAA
GGGGGACCTTCCCCAGGTGTGCCTGTCCCTCCGTGCCATGCTCATGGAAGGGCTGAGGCCAATG
TGTGGAGGAAAAGAGTGACAACTGGGCCTGGCCGAAGTCCCCACCCAGAGTGGGGTCCCAGAAG
TTCCCAGTGTCTACTCTTTCGCCGAAGTCAAGTGTGTGTTTTGTGGCTTCACCTCCAAAGATCT
GCCACAGTGAAGACTAGTGGCAAGGATGAGCCCTTCTTTCATCATGGAAACACCAAGGTATCAG
CCCAAGATCATGAGGAGACCCTTCTACTCTGTGGTGCATGATGCTGCTGAGCCATGATCTTCAG
TAGAATATGTGTATTATGTGTATTTTGGACTTAAGATATTTTCAATTTATGATGAGTTCCTCAG
AATGCAAAGCCGTTGTCATCCAAGAATCATCTATATAGAAGAATGTTAGCAGTAATAGAGTCTA
GGTGTTAAGTACATATGCATTTTCACTTTCAACTTTTCTAGATGTTTGAAAATTTTCATAATAA
AATGTTGATGTATGACTTGGTAAAAATAAACATGGCAAAAGTTCA

hide sequence

RefSeq Acc Id:

XM_006517377 ⟹ XP_006517440

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	74,119,243 - 74,141,109 (+)	NCBI
GRCm38	13	73,971,124 - 73,992,990 (+)	NCBI

Sequence:

show sequence

ACGAATCCAGACAGTATCAGAATGTTGACGCCTCCTGGGCCTCCCCTCTTCCTGCGGAAACAGG
ACAAGGGAGAGGTCACTAGTTCGAGGAGGCTAAGAAGGGTGGTGTCCTGAGCTGGCGCCCTTCC
TTTGTTTGTTTACTAAACACAGATTGTTGCTAGGGAATGTTCCAGCCAGCTGTGGTTCTCATAG
GCTCCCACATGGAAACTTCCAGAGGGAGTTGGAGGGAGGCCTCCATGGAGGACACCTCACCCTG
CTTCTTTCACATTTAGCTATCCACTGAGACAAGGCTCTAGAGAAGACAGGGGCAGATCCTGAAG
AAGTTTCTCTTCTGGGTTCCCTCTTGGGAATGTCACCTTGGAGCAAAAAAGCCAAACATTGCAG
CGCCTGCAACAAATGTGTCTCTGGCTTTGACCACCACTGCAAATGGCTGAACAACTGCGTGGGC
AGGAGAAACTACTGGTTCTTTTTCTGGTCTGTGGCCTCAGCTGCAGTTGGGATTCTTGGTGTGA
TGATTATCTTGTGTTATATCTGCATCCAGTACTTTGTCAACCCTGATGAGCTTCGCACGGATCC
TCTCTATAAAGAGATCATCTCTGAGAACACATGGCTGCTGTTCCTCTCACTGTGGCCTGTGCCT
GTGAAGACCCCCATAGTCCTTTCCATCGCGGTGATGGCACTGCTACTAGCTATTGCCAGCTTCG
TGATGCTTGGGCACCTCCTCATCTTCCACTTATACCTGATTACTAAGAATATGAGCACATTTGA
CTACCTGATGAAGACTCGATTCAAGAAGAATTTACATCCAGCAGAGGAGAAAGAGCTACCTCTA
CAGAAGAAGGGGGACCTTCCCCAGGAAAAGAGTGACAACTGGGCCTGGCCGAAGTCCCCACCCA
GAGTGGGGTCCCAGAAGTTCCCAGTGTCTACTCTTTCGCCGAAGTCAAGTGTGTGTTTTGTGGC
TTCACCTCCAAAGATCTGCCACAGTGAAGACTAGTGGCAAGGATGAGCCCTTCTTTCATCATGG
AAACACCAAGGTATCAGCCCAAGATCATGAGGAGACCCTTCTACTCTGTGGTGCATGATGCTGC
TGAGCCATGATCTTCAGTAGAATATGTGTATTATGTGTATTTTGGACTTAAGATATTTTCAATT
TATGATGAGTTCCTCAGAATGCAAAGCCGTTGTCATCCAAGAATCATCTATATAGAAGAATGTT
AGCAGTAATAGAGTCTAGGTGTTAAGTACATATGCATTTTCACTTTCAACTTTTCTAGATGTTT
GAAAATTTTCATAATAAAATGTTGATGTATGACTTGGTAAAAATAAACATGGCAAAAGTTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_081980	(Get FASTA)	NCBI Sequence Viewer
	XP_006517440	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI16804	(Get FASTA)	NCBI Sequence Viewer
	AAI16808	(Get FASTA)	NCBI Sequence Viewer
	AAU89702	(Get FASTA)	NCBI Sequence Viewer
	Q14AK4	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_081980 ⟸ NM_027704

- UniProtKB:

Q5Y5T4 (UniProtKB/Swiss-Prot), Q14AK4 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MKEMNICGINKNWVLPEAQENNVKKFLPRPLSRVNGWSPPLHSFQAISWITYLAMSIVTFGIFI
PFLPYSWKYAANIVMGGVFIFHLIVHLIAITIDPADTNVRLKKDYTQPVPAFDRSKHTHVIQNQ
YCHLCEVTASKKAKHCSACNKCVSGFDHHCKWLNNCVGRRNYWFFFWSVASAAVGILGVMIILC
YICIQYFVNPDELRTDPLYKEIISENTWLLFLSLWPVPVKTPIVLSIAVMALLLAIASFVMLGH
LLIFHLYLITKNMSTFDYLMKTRFKKNLHPAEEKELPLQKKGDLPQEKSDNWAWPKSPPRVGSQ
KFPVSTLSPKSSVCFVASPPKICHSED

hide sequence

RefSeq Acc Id:

XP_006517440 ⟸ XM_006517377

- Peptide Label:

isoform X1

- Sequence:

show sequence

MSPWSKKAKHCSACNKCVSGFDHHCKWLNNCVGRRNYWFFFWSVASAAVGILGVMIILCYICIQ
YFVNPDELRTDPLYKEIISENTWLLFLSLWPVPVKTPIVLSIAVMALLLAIASFVMLGHLLIFH
LYLITKNMSTFDYLMKTRFKKNLHPAEEKELPLQKKGDLPQEKSDNWAWPKSPPRVGSQKFPVS
TLSPKSSVCFVASPPKICHSED

hide sequence

RefSeq Acc Id:

ENSMUSP00000089075 ⟸ ENSMUST00000091493

RefSeq Acc Id:

ENSMUSP00000152788 ⟸ ENSMUST00000222951

RefSeq Acc Id:

ENSMUSP00000152197 ⟸ ENSMUST00000222487

Protein Domains

DHHC Palmitoyltransferase DHHC

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q14AK4-F1-model_v2	AlphaFold	Q14AK4	1-347	view protein structure

Promoters

RGD ID:

8680820

Promoter ID:

EPDNEW_M18441

Type:

initiation region

Name:

Zdhhc11_1

Description:

Mus musculus zinc finger, DHHC domain containing 11 , transcriptvariant 2, non-coding RNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	13	73,963,873 - 73,963,933	EPDNEW

RGD ID:

6824493

Promoter ID:

MM_KWN:14674

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour

Transcripts:

NM_027704

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	13	74,100,141 - 74,100,641 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1918414	AgrOrtholog
Ensembl Genes	ENSMUSG00000069189	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000089075	ENTREZGENE
	ENSMUSP00000089075.5	UniProtKB/Swiss-Prot
	ENSMUSP00000152197.2	UniProtKB/TrEMBL
	ENSMUSP00000152788.2	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000091493	ENTREZGENE
	ENSMUST00000091493.6	UniProtKB/Swiss-Prot
	ENSMUST00000222487	ENTREZGENE
	ENSMUST00000222487.2	UniProtKB/TrEMBL
	ENSMUST00000222951.2	UniProtKB/TrEMBL
InterPro	Palmitoyltrfase_DHHC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:71164	UniProtKB/Swiss-Prot
MGD	MGI:1918414	ENTREZGENE
NCBI Gene	71164	ENTREZGENE
PANTHER	PALMITOYLTRANSFERASE ZDHHC11-RELATED	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DHHC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Zdhhc11	PhenoGen
PROSITE	DHHC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A1Y7VLH9_MOUSE	UniProtKB/TrEMBL
	A0A1Y7VP32_MOUSE	UniProtKB/TrEMBL
	Q14AK4	ENTREZGENE
	Q5Y5T4	ENTREZGENE
	ZDH11_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	Q5Y5T4	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype