Gas2l1 (growth arrest-specific 2 like 1) - Rat Genome Database

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Gene: Gas2l1 (growth arrest-specific 2 like 1) Mus musculus
Analyze
Symbol: Gas2l1
Name: growth arrest-specific 2 like 1
RGD ID: 1616678
MGI Page MGI
Description: Predicted to enable actin filament binding activity; cytoskeletal anchor activity; and microtubule binding activity. Involved in cellular response to starvation. Located in cytoplasm. Colocalizes with microtubule and stress fiber. Is expressed in brain; male reproductive gland or organ; and metanephros. Orthologous to human GAS2L1 (growth arrest specific 2 like 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930500E24Rik; D0Jmb1; GAR; GAR22; GAS2-like protein 1; GAS2-related protein; RP23-64E17.7; TU-71.1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39115,004,131 - 5,015,351 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl115,004,132 - 5,015,327 (-)EnsemblGRCm39 Ensembl
GRCm38115,054,131 - 5,065,348 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl115,054,132 - 5,065,327 (-)EnsemblGRCm38mm10GRCm38
MGSCv37114,954,134 - 4,965,330 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36114,950,920 - 4,964,854 (-)NCBIMGSCv36mm8
Celera115,551,023 - 5,562,217 (-)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
actin filament  (IBA,ISO)
cytoplasm  (IBA,IDA,ISO)
cytoskeleton  (IEA)
microtubule  (IDA,ISO)
microtubule plus-end  (IBA,ISO)
stress fiber  (IBA,IDA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1602141   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12584248   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:18799693   PMID:19375645   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24194600   PMID:26564797   PMID:27626380  


Genomics

Comparative Map Data
Gas2l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39115,004,131 - 5,015,351 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl115,004,132 - 5,015,327 (-)EnsemblGRCm39 Ensembl
GRCm38115,054,131 - 5,065,348 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl115,054,132 - 5,065,327 (-)EnsemblGRCm38mm10GRCm38
MGSCv37114,954,134 - 4,965,330 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36114,950,920 - 4,964,854 (-)NCBIMGSCv36mm8
Celera115,551,023 - 5,562,217 (-)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.21NCBI
GAS2L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382229,306,650 - 29,312,787 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2229,306,618 - 29,312,787 (+)EnsemblGRCh38hg38GRCh38
GRCh372229,702,640 - 29,708,776 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362228,032,997 - 28,038,774 (+)NCBINCBI36Build 36hg18NCBI36
Build 342228,027,550 - 28,033,328NCBI
Celera2213,502,852 - 13,508,630 (+)NCBICelera
Cytogenetic Map22q12.2NCBI
HuRef2212,667,224 - 12,673,019 (+)NCBIHuRef
CHM1_12229,662,401 - 29,668,196 (+)NCBICHM1_1
T2T-CHM13v2.02229,769,795 - 29,776,198 (+)NCBIT2T-CHM13v2.0
Gas2l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81484,169,398 - 84,175,514 (-)NCBIGRCr8
mRatBN7.21479,955,350 - 79,961,830 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1479,950,555 - 79,961,438 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1484,357,658 - 84,363,768 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01485,597,740 - 85,603,850 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01482,047,079 - 82,053,189 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01485,308,443 - 85,318,475 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1485,308,443 - 85,318,194 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01485,986,064 - 85,995,860 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41485,716,617 - 85,726,368 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11485,740,654 - 85,745,508 (-)NCBI
Celera1478,842,658 - 78,852,409 (-)NCBICelera
Cytogenetic Map14q21NCBI
Gas2l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554553,613,092 - 3,621,306 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554553,613,092 - 3,618,476 (+)NCBIChiLan1.0ChiLan1.0
GAS2L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22339,290,157 - 39,296,331 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12241,990,691 - 41,996,963 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02210,362,391 - 10,368,173 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12228,169,388 - 28,175,278 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2228,169,387 - 28,175,278 (+)Ensemblpanpan1.1panPan2
GAS2L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12622,615,531 - 22,620,605 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2622,615,319 - 22,621,311 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2622,486,993 - 22,492,483 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02622,989,305 - 22,994,798 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12622,698,503 - 22,703,987 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02622,961,632 - 22,967,113 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02623,026,621 - 23,032,106 (+)NCBIUU_Cfam_GSD_1.0
Gas2l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118112,537,639 - 112,543,342 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366573,327,339 - 3,333,797 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366573,327,363 - 3,333,087 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAS2L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1446,449,787 - 46,455,276 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11446,449,767 - 46,455,278 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21449,414,643 - 49,420,160 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GAS2L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11912,175,207 - 12,181,295 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1912,176,015 - 12,183,723 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045113,968,749 - 113,975,139 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gas2l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247475,684,108 - 5,688,124 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247475,683,107 - 5,688,405 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gas2l1
325 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1541
Count of miRNA genes:640
Interacting mature miRNAs:793
Transcripts:ENSMUST00000037146, ENSMUST00000056649, ENSMUST00000109895, ENSMUST00000122886, ENSMUST00000151936, ENSMUST00000152257, ENSMUST00000156196
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse

Markers in Region
AI852688  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38115,060,143 - 5,060,291UniSTSGRCm38
MGSCv37114,960,146 - 4,960,294UniSTSGRCm37
Celera115,557,033 - 5,557,181UniSTS
Cytogenetic Map11A1UniSTS
Whitehead/MRC_RH1121.88UniSTS
RH17231  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38115,060,513 - 5,060,621UniSTSGRCm38
MGSCv37114,960,516 - 4,960,624UniSTSGRCm37
Celera115,557,403 - 5,557,511UniSTS
Cytogenetic Map11A1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001190406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF508323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF508324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW061138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC098192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY231632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ170523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M89786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000037146   ⟹   ENSMUSP00000043709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,005,378 - 5,015,300 (-)Ensembl
GRCm38.p6 Ensembl115,055,378 - 5,065,300 (-)Ensembl
RefSeq Acc Id: ENSMUST00000056649   ⟹   ENSMUSP00000050275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,010,372 - 5,015,327 (-)Ensembl
GRCm38.p6 Ensembl115,060,372 - 5,065,327 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109895   ⟹   ENSMUSP00000105521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,010,381 - 5,015,277 (-)Ensembl
GRCm38.p6 Ensembl115,060,381 - 5,065,277 (-)Ensembl
RefSeq Acc Id: ENSMUST00000122886
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,004,132 - 5,015,294 (-)Ensembl
GRCm38.p6 Ensembl115,054,132 - 5,065,294 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,014,417 - 5,015,294 (-)Ensembl
GRCm38.p6 Ensembl115,064,417 - 5,065,294 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152257   ⟹   ENSMUSP00000121993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,013,873 - 5,015,278 (-)Ensembl
GRCm38.p6 Ensembl115,063,873 - 5,065,278 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl115,010,470 - 5,014,851 (-)Ensembl
GRCm38.p6 Ensembl115,060,470 - 5,064,851 (-)Ensembl
RefSeq Acc Id: NM_001190406   ⟹   NP_001177335
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,004,131 - 5,015,327 (-)NCBI
GRCm38115,054,131 - 5,065,327 (-)NCBI
MGSCv37114,954,134 - 4,965,330 (-)RGD
Celera115,551,023 - 5,562,217 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190408   ⟹   NP_001177337
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,010,375 - 5,015,327 (-)NCBI
GRCm38115,060,375 - 5,065,327 (-)NCBI
MGSCv37114,954,134 - 4,965,330 (-)RGD
Celera115,551,023 - 5,562,217 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_030228   ⟹   NP_084504
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,004,131 - 5,015,327 (-)NCBI
GRCm38115,054,131 - 5,065,327 (-)NCBI
MGSCv37114,954,134 - 4,965,330 (-)RGD
Celera115,551,023 - 5,562,217 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_144560   ⟹   NP_653146
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,010,375 - 5,015,327 (-)NCBI
GRCm38115,060,375 - 5,065,327 (-)NCBI
MGSCv37114,954,134 - 4,965,330 (-)RGD
Celera115,551,023 - 5,562,217 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017314850   ⟹   XP_017170339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,010,372 - 5,015,351 (-)NCBI
GRCm38115,060,377 - 5,065,348 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246437   ⟹   XP_030102297
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39115,010,372 - 5,015,351 (-)NCBI
GRCm38115,060,377 - 5,065,348 (-)NCBI
Sequence:
RefSeq Acc Id: NP_653146   ⟸   NM_144560
- Peptide Label: isoform beta
- UniProtKB: Q5SVG0 (UniProtKB/Swiss-Prot),   Q8K573 (UniProtKB/Swiss-Prot),   Q8JZP9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_084504   ⟸   NM_030228
- Peptide Label: isoform alpha
- UniProtKB: Q9D2H3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177335   ⟸   NM_001190406
- Peptide Label: isoform gamma
- UniProtKB: Q9D2H3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177337   ⟸   NM_001190408
- Peptide Label: isoform beta
- UniProtKB: Q5SVG0 (UniProtKB/Swiss-Prot),   Q8K573 (UniProtKB/Swiss-Prot),   Q8JZP9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017170339   ⟸   XM_017314850
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030102297   ⟸   XM_030246437
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000121993   ⟸   ENSMUST00000152257
RefSeq Acc Id: ENSMUSP00000043709   ⟸   ENSMUST00000037146
RefSeq Acc Id: ENSMUSP00000050275   ⟸   ENSMUST00000056649
RefSeq Acc Id: ENSMUSP00000105521   ⟸   ENSMUST00000109895
Protein Domains
Calponin-homology (CH)   GAR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8JZP9-F1-model_v2 AlphaFold Q8JZP9 1-678 view protein structure

Promoters
RGD ID:6820919
Promoter ID:MM_KWN:6271
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4
Transcripts:OTTMUST00000011313,   OTTMUST00000011316,   OTTMUST00000011319,   UC007HVQ.1,   UC007HVR.1,   UC007HVT.1,   UC007HVV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36114,964,994 - 4,965,494 (-)MPROMDB
RGD ID:8673824
Promoter ID:EPDNEW_M14943
Type:initiation region
Name:Gas2l1_1
Description:Mus musculus growth arrest-specific 2 like 1 , transcript variantdelta, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38115,065,303 - 5,065,363EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926176 AgrOrtholog
Ensembl Genes ENSMUSG00000034201 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000037146 ENTREZGENE
  ENSMUST00000037146.10 UniProtKB/TrEMBL
  ENSMUST00000056649 ENTREZGENE
  ENSMUST00000056649.13 UniProtKB/Swiss-Prot
  ENSMUST00000109895 ENTREZGENE
  ENSMUST00000109895.2 UniProtKB/Swiss-Prot
  ENSMUST00000122886 ENTREZGENE
  ENSMUST00000152257.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.920.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:78926 UniProtKB/Swiss-Prot
MGD MGI:1926176 ENTREZGENE
NCBI Gene 78926 ENTREZGENE
PANTHER PTHR46756:SF16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANSGELIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GAS2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00307 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gas2l1 PhenoGen
PROSITE GAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50021 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART GAS2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00033 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF143575 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47576 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt GA2L1_MOUSE UniProtKB/Swiss-Prot
  Q5SVG0 ENTREZGENE
  Q8JZP9 ENTREZGENE
  Q8K573 ENTREZGENE
  Q9D2H3 ENTREZGENE, UniProtKB/TrEMBL
  Z4YN41_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q5SVG0 UniProtKB/Swiss-Prot
  Q8K573 UniProtKB/Swiss-Prot