N4bp2 (NEDD4 binding protein 2) - Rat Genome Database

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Gene: N4bp2 (NEDD4 binding protein 2) Mus musculus
Analyze
Symbol: N4bp2
Name: NEDD4 binding protein 2
RGD ID: 1616417
MGI Page MGI
Description: Predicted to enable ATP binding activity; ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity; and DNA endonuclease activity. Located in cytosol. Is expressed in ovary and primary sex cord. Orthologous to human N4BP2 (NEDD4 binding protein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B3b; B3bp; Bcl3 binding protein; E430014I16; Gm1791; Gm868; NEDD4-binding protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39565,909,462 - 65,987,450 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl565,920,864 - 65,987,451 (+)EnsemblGRCm39 Ensembl
GRCm38565,760,510 - 65,830,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl565,763,521 - 65,830,108 (+)EnsemblGRCm38mm10GRCm38
MGSCv37566,154,760 - 66,218,023 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36566,042,656 - 66,105,919 (+)NCBIMGSCv36mm8
Celera563,056,171 - 63,121,053 (+)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map533.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11717310   PMID:12466851   PMID:12477932   PMID:12730195   PMID:14595844   PMID:14610273   PMID:15368895   PMID:16141072  
PMID:16141073   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:28671696   PMID:30595499   PMID:34709266  


Genomics

Comparative Map Data
N4bp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39565,909,462 - 65,987,450 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl565,920,864 - 65,987,451 (+)EnsemblGRCm39 Ensembl
GRCm38565,760,510 - 65,830,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl565,763,521 - 65,830,108 (+)EnsemblGRCm38mm10GRCm38
MGSCv37566,154,760 - 66,218,023 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36566,042,656 - 66,105,919 (+)NCBIMGSCv36mm8
Celera563,056,171 - 63,121,053 (+)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map533.8NCBI
N4BP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38440,056,850 - 40,190,470 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl440,056,797 - 40,158,252 (+)EnsemblGRCh38hg38GRCh38
GRCh37440,058,470 - 40,159,872 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36439,775,242 - 39,833,423 (+)NCBINCBI36Build 36hg18NCBI36
Celera440,497,305 - 40,595,932 (+)NCBICelera
Cytogenetic Map4p14NCBI
HuRef439,381,945 - 39,483,119 (+)NCBIHuRef
CHM1_1440,057,424 - 40,159,070 (+)NCBICHM1_1
T2T-CHM13v2.0440,026,953 - 40,157,597 (+)NCBIT2T-CHM13v2.0
N4bp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81442,696,415 - 42,819,535 (-)NCBIGRCr8
mRatBN7.21442,342,690 - 42,479,861 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1442,409,510 - 42,483,960 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01443,963,353 - 44,092,844 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1444,038,614 - 44,078,897 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01443,782,882 - 43,908,753 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41445,096,756 - 45,142,700 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1441,560,669 - 41,632,706 (-)NCBICelera
Cytogenetic Map14p11NCBI
N4bp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554437,301,141 - 7,354,681 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554437,295,066 - 7,435,761 (-)NCBIChiLan1.0ChiLan1.0
N4BP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2340,243,048 - 40,355,355 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1440,428,265 - 40,547,334 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0434,380,215 - 34,482,797 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1440,253,199 - 40,336,040 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl440,253,199 - 40,336,040 (+)Ensemblpanpan1.1panPan2
N4BP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1372,323,016 - 72,439,593 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl372,277,190 - 72,439,615 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha374,866,346 - 74,988,131 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0373,084,841 - 73,207,383 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl373,090,114 - 73,207,308 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1372,353,404 - 72,475,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0372,503,885 - 72,625,754 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0372,889,208 - 73,011,634 (-)NCBIUU_Cfam_GSD_1.0
N4bp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528538,651,322 - 38,726,191 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364827,592,442 - 7,646,821 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364827,576,188 - 7,648,140 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
N4BP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl831,219,397 - 31,287,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1831,216,942 - 31,287,993 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2832,865,820 - 32,955,396 (+)NCBISscrofa10.2Sscrofa10.2susScr3
N4BP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12710,147,274 - 10,249,824 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2710,151,301 - 10,249,772 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604756,520,517 - 56,617,505 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
N4bp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476126,813,526 - 26,874,313 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476126,810,603 - 26,905,017 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in N4bp2
3155 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1314
Count of miRNA genes:686
Interacting mature miRNAs:840
Transcripts:ENSMUST00000087264, ENSMUST00000113738, ENSMUST00000127411, ENSMUST00000136674, ENSMUST00000137190, ENSMUST00000138239, ENSMUST00000138607
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53569446269694594Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53569446269694594Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53569446269694594Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53585456869854714Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53585456869854714Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3643342370433423Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53649448670494598Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53764377771643896Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53811168172111798Mouse
1301698Pcfm4_mperiosteal circumference and femur length 4 (mouse)Not determined54458584378585965Mouse
13207584Mwmlpt4_mMorris water maze latency to platform, training, 4 (mouse)54632260680322606Mouse
13207588Mwmlpa4_mMorris water maze latency to platform, all, 4 (mouse)54632260680322606Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
13464248Ahl13_mage related hearing loss, early onset 13 (mouse)55564587489645995Mouse
10043962Obq27_mobesity QTL 27 (mouse)Not determined55628565590285655Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse

Markers in Region
UniSTS:235186  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38565,826,679 - 65,826,836UniSTSGRCm38
MGSCv37566,217,918 - 66,218,075UniSTSGRCm37
Celera563,120,948 - 63,121,105UniSTS
Cytogenetic Map5C3.1UniSTS
UniSTS:235189  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38565,829,742 - 65,830,016UniSTSGRCm38
MGSCv37566,220,981 - 66,221,255UniSTSGRCm37
Celera563,124,011 - 63,124,285UniSTS
Cytogenetic Map5C3.1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001024917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC098683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK637074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX769144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000087264   ⟹   ENSMUSP00000084519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,921,463 - 65,983,993 (+)Ensembl
GRCm38.p6 Ensembl565,764,120 - 65,826,650 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,958,416 - 65,961,550 (+)Ensembl
GRCm38.p6 Ensembl565,801,073 - 65,804,207 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,982,585 - 65,984,217 (+)Ensembl
GRCm38.p6 Ensembl565,825,242 - 65,826,874 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201489   ⟹   ENSMUSP00000143807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,920,864 - 65,987,451 (+)Ensembl
GRCm38.p6 Ensembl565,763,521 - 65,830,108 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201503
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,921,322 - 65,933,237 (+)Ensembl
GRCm38.p6 Ensembl565,763,979 - 65,775,894 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201615   ⟹   ENSMUSP00000144278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,921,463 - 65,974,627 (+)Ensembl
GRCm38.p6 Ensembl565,764,120 - 65,817,284 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202411
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,967,074 - 65,972,401 (+)Ensembl
GRCm38.p6 Ensembl565,809,731 - 65,815,058 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,940,291 - 65,942,444 (+)Ensembl
GRCm38.p6 Ensembl565,782,948 - 65,785,101 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl565,921,322 - 65,943,602 (+)Ensembl
GRCm38.p6 Ensembl565,763,979 - 65,786,259 (+)Ensembl
RefSeq Acc Id: NM_001024917   ⟹   NP_001020088
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,920,864 - 65,984,127 (+)NCBI
GRCm38565,763,521 - 65,826,784 (+)NCBI
MGSCv37566,154,760 - 66,218,023 (+)RGD
Celera563,056,171 - 63,121,053 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006504003   ⟹   XP_006504066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,367 - 65,987,450 (+)NCBI
GRCm38565,764,024 - 65,830,107 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006504004   ⟹   XP_006504067
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,909,462 - 65,987,067 (+)NCBI
GRCm38565,760,510 - 65,829,724 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006504005   ⟹   XP_006504068
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,508 - 65,986,862 (+)NCBI
GRCm38565,764,165 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006504006   ⟹   XP_006504069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,422 - 65,986,862 (+)NCBI
GRCm38565,764,149 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006504007   ⟹   XP_006504070
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,367 - 65,986,862 (+)NCBI
GRCm38565,764,079 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011240752   ⟹   XP_011239054
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,503 - 65,986,862 (+)NCBI
GRCm38565,764,160 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320937   ⟹   XP_017176426
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,955,516 - 65,987,067 (+)NCBI
GRCm38565,798,173 - 65,829,724 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254609   ⟹   XP_030110469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,500 - 65,986,862 (+)NCBI
GRCm38565,763,565 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254610   ⟹   XP_030110470
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,909,462 - 65,987,067 (+)NCBI
GRCm38565,760,510 - 65,829,724 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254611   ⟹   XP_030110471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,909,462 - 65,987,067 (+)NCBI
GRCm38565,760,510 - 65,829,724 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254612   ⟹   XP_030110472
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,500 - 65,986,862 (+)NCBI
GRCm38565,764,157 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254613   ⟹   XP_030110473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,500 - 65,986,862 (+)NCBI
GRCm38565,764,157 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254614   ⟹   XP_030110474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,921,484 - 65,986,862 (+)NCBI
GRCm38565,764,141 - 65,829,519 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254615   ⟹   XP_030110475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,909,462 - 65,987,067 (+)NCBI
GRCm38565,760,510 - 65,829,724 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165236   ⟹   XP_036021129
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39565,909,462 - 65,987,067 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001020088   ⟸   NM_001024917
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504067   ⟸   XM_006504004
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504070   ⟸   XM_006504007
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504069   ⟸   XM_006504006
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504066   ⟸   XM_006504003
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504068   ⟸   XM_006504005
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011239054   ⟸   XM_011240752
- Peptide Label: isoform X1
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176426   ⟸   XM_017320937
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_030110471   ⟸   XM_030254611
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110470   ⟸   XM_030254610
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110475   ⟸   XM_030254615
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110469   ⟸   XM_030254609
- Peptide Label: isoform X2
- UniProtKB: A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110474   ⟸   XM_030254614
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110472   ⟸   XM_030254612
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030110473   ⟸   XM_030254613
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000084519   ⟸   ENSMUST00000087264
RefSeq Acc Id: ENSMUSP00000143807   ⟸   ENSMUST00000201489
RefSeq Acc Id: ENSMUSP00000144278   ⟸   ENSMUST00000201615
RefSeq Acc Id: XP_036021129   ⟸   XM_036165236
- Peptide Label: isoform X3
- UniProtKB: F8VQG7 (UniProtKB/TrEMBL),   A0A0J9YUP5 (UniProtKB/TrEMBL)
Protein Domains
Smr

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F8VQG7-F1-model_v2 AlphaFold F8VQG7 1-1678 view protein structure

Promoters
RGD ID:6886780
Promoter ID:EPDNEW_M6841
Type:multiple initiation site
Name:N4bp2_2
Description:Mus musculus NEDD4 binding protein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6844  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38565,763,444 - 65,763,504EPDNEW
RGD ID:6886786
Promoter ID:EPDNEW_M6844
Type:initiation region
Name:N4bp2_1
Description:Mus musculus NEDD4 binding protein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6841  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38565,764,052 - 65,764,112EPDNEW
RGD ID:6837951
Promoter ID:MM_KWN:42398
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   ES_Cell
Transcripts:ENSMUST00000039982,   ENSMUST00000113738,   OTTMUST00000052803,   OTTMUST00000052804,   UC008XOB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36566,154,774 - 66,155,274 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2684414 AgrOrtholog
Ensembl Genes ENSMUSG00000037795 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087264 ENTREZGENE
  ENSMUST00000087264.4 UniProtKB/TrEMBL
  ENSMUST00000201489 ENTREZGENE
  ENSMUST00000201489.4 UniProtKB/TrEMBL
  ENSMUST00000201615.4 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.110 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro DUF1771 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Smr/MutS2_C UniProtKB/TrEMBL
  Smr_dom_sf UniProtKB/TrEMBL
KEGG Report mmu:333789 UniProtKB/TrEMBL
MGD MGI:2684414 ENTREZGENE
NCBI Gene 333789 ENTREZGENE
PANTHER NEDD4-BINDING PROTEIN 2 UniProtKB/TrEMBL
  NEDD4-BINDING PROTEIN 2 UniProtKB/TrEMBL
Pfam AAA_33 UniProtKB/TrEMBL
  DUF1771 UniProtKB/TrEMBL
  Smr UniProtKB/TrEMBL
PhenoGen N4bp2 PhenoGen
PROSITE SMR UniProtKB/TrEMBL
SMART DUF1771 UniProtKB/TrEMBL
  SMR UniProtKB/TrEMBL
Superfamily-SCOP SSF160443 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A0J9YUP5 ENTREZGENE, UniProtKB/TrEMBL
  F8VQG7 ENTREZGENE, UniProtKB/TrEMBL
  Q69ZK1_MOUSE UniProtKB/TrEMBL
  Q8BX85_MOUSE UniProtKB/TrEMBL