Gm7550 (predicted gene 7550) - Rat Genome Database

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Gene: Gm7550 (predicted gene 7550) Mus musculus
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Symbol: Gm7550
Name: predicted gene 7550
RGD ID: 1616221
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: EG665239; Gm666
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391254,434,519 - 54,438,104 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1254,434,828 - 54,438,104 (-)EnsemblGRCm39 Ensembl
GRCm381254,387,733 - 54,391,318 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1254,388,042 - 54,391,318 (-)EnsemblGRCm38mm10GRCm38
MGSCv371255,488,720 - 55,492,305 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361255,309,359 - 55,312,944 (-)NCBIMGSCv36mm8
Celera1255,703,527 - 55,707,112 (-)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1223.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21267068  


Genomics

Variants

.
Variants in Gm7550
161 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
12904004Opfaq11_mopen field activity QTL 11 (mouse)125315562457276756Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000223334
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1254,434,828 - 54,438,104 (-)Ensembl
GRCm38.p6 Ensembl1254,388,042 - 54,391,318 (-)Ensembl
RefSeq Acc Id: NR_033689
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391254,434,519 - 54,438,104 (-)NCBI
GRCm381254,387,733 - 54,391,318 (-)ENTREZGENE
MGSCv371255,488,720 - 55,492,305 (-)RGD
Celera1255,703,527 - 55,707,112 (-)RGD
cM Map12 ENTREZGENE
Sequence:
Protein Sequences
GenBank Protein EDL36752 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000113970 Ensembl
MGD MGI:3644880 ENTREZGENE
NCBI Gene 665239 ENTREZGENE
PhenoGen Gm7550 PhenoGen
RNAcentral URS000075B537 RNACentral