Elp5 (elongator acetyltransferase complex subunit 5) - Rat Genome Database
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Gene: Elp5 (elongator acetyltransferase complex subunit 5) Mus musculus
Analyze
Symbol: Elp5
Name: elongator acetyltransferase complex subunit 5
RGD ID: 1615924
MGI Page MGI
Description: Is expressed in genitourinary system and telencephalon. Orthologous to human ELP5 (elongator acetyltransferase complex subunit 5); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: clone 13u; dermal papilla-derived protein 6 homolog; Derp6; elongator complex protein 5; Ra; Rai12; retinoic acid induced 12; retinoic acid-induced protein 12
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,859,050 - 69,872,352 (-)NCBIGRCm39mm39
GRCm39 Ensembl1169,859,048 - 69,873,343 (-)Ensembl
GRCm381169,968,224 - 69,981,447 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,968,222 - 69,982,517 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,781,726 - 69,794,737 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,784,419 - 69,796,705 (-)NCBImm8
Celera1177,516,158 - 77,528,499 (-)NCBICelera
Cytogenetic Map11B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
cytosol  (IBA,ISO)
elongator holoenzyme complex  (IBA,ISO)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9371513   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:18287559   PMID:18799693   PMID:19185337   PMID:21677750   PMID:21873635   PMID:22854966   PMID:31321879   PMID:32325033  


Genomics

Comparative Map Data
Elp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,859,050 - 69,872,352 (-)NCBIGRCm39mm39
GRCm39 Ensembl1169,859,048 - 69,873,343 (-)Ensembl
GRCm381169,968,224 - 69,981,447 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,968,222 - 69,982,517 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,781,726 - 69,794,737 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,784,419 - 69,796,705 (-)NCBImm8
Celera1177,516,158 - 77,528,499 (-)NCBICelera
Cytogenetic Map11B3NCBI
ELP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl177,251,416 - 7,259,940 (+)EnsemblGRCh38hg38GRCh38
GRCh38177,251,737 - 7,259,940 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37177,155,056 - 7,163,259 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,096,096 - 7,103,987 (+)NCBINCBI36hg18NCBI36
Celera177,180,017 - 7,187,904 (+)NCBI
Cytogenetic Map17p13.1NCBI
HuRef177,046,778 - 7,054,665 (+)NCBIHuRef
CHM1_1177,164,164 - 7,172,057 (+)NCBICHM1_1
Elp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21054,692,526 - 54,704,255 (-)NCBI
Rnor_6.0 Ensembl1056,578,985 - 56,591,364 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01056,578,980 - 56,590,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01056,324,100 - 56,335,825 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,813,486 - 56,825,043 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,827,112 - 56,838,666 (-)NCBI
Celera1053,846,158 - 53,857,718 (-)NCBICelera
Cytogenetic Map10q24NCBI
Elp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,651,219 - 9,659,502 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,654,532 - 9,660,035 (-)NCBIChiLan1.0ChiLan1.0
ELP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1177,269,468 - 7,277,347 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0177,281,571 - 7,289,800 (+)NCBIMhudiblu_PPA_v0panPan3
ELP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl532,217,464 - 32,223,732 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1532,217,752 - 32,223,729 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Elp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936595544,091 - 550,114 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ELP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,603,833 - 52,612,275 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,606,140 - 52,612,275 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,828,997 - 54,834,932 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ELP5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,625,418 - 6,632,732 (+)NCBI
ChlSab1.1 Ensembl166,625,723 - 6,635,327 (+)Ensembl
Elp5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,866,689 - 9,873,242 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116910000072600000Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116910000072600000Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116910000072600000Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116910000072600000Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116910000072600000Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116910000072600000Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116910000072600000Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116910000072600000Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116910000072600000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1683
Count of miRNA genes:608
Interacting mature miRNAs:739
Transcripts:ENSMUST00000108594, ENSMUST00000108595, ENSMUST00000123701, ENSMUST00000127437, ENSMUST00000138562, ENSMUST00000142788, ENSMUST00000143175, ENSMUST00000143788, ENSMUST00000147437, ENSMUST00000151766
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001253700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA646690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF004107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE862527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY292587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD741073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD776986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000108594   ⟹   ENSMUSP00000104235
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,968,224 - 69,981,252 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108595   ⟹   ENSMUSP00000104236
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,970,730 - 69,981,639 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123701
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,968,228 - 69,980,263 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127437   ⟹   ENSMUSP00000136578
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,969,241 - 69,980,061 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138562
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,969,515 - 69,980,261 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142788   ⟹   ENSMUSP00000136063
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,968,222 - 69,980,272 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143175   ⟹   ENSMUSP00000136484
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,980,035 - 69,980,696 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143788
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,970,712 - 69,980,211 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147437   ⟹   ENSMUSP00000117394
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,975,103 - 69,982,517 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151766
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,968,232 - 69,969,403 (-)Ensembl
RefSeq Acc Id: NM_001253700   ⟹   NP_001240629
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,859,050 - 69,871,156 (-)NCBI
GRCm381169,968,224 - 69,980,330 (-)NCBI
Celera1177,516,158 - 77,528,499 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_018740   ⟹   NP_061210
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,859,050 - 69,872,061 (-)NCBI
GRCm381169,968,224 - 69,981,235 (-)NCBI
MGSCv371169,781,726 - 69,794,737 (-)RGD
Celera1177,516,158 - 77,528,499 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533752   ⟹   XP_006533815
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,859,050 - 69,872,352 (-)NCBI
GRCm381169,968,224 - 69,981,447 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246159   ⟹   XP_030102019
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,859,050 - 69,872,119 (-)NCBI
GRCm381169,968,224 - 69,981,293 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156855   ⟹   XP_036012748
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,859,050 - 69,872,117 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_061210   ⟸   NM_018740
- Peptide Label: isoform 1
- UniProtKB: Q99L85 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001240629   ⟸   NM_001253700
- Peptide Label: isoform 2
- Sequence:
RefSeq Acc Id: XP_006533815   ⟸   XM_006533752
- Peptide Label: isoform X1
- UniProtKB: Q99L85 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030102019   ⟸   XM_030246159
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000136484   ⟸   ENSMUST00000143175
RefSeq Acc Id: ENSMUSP00000104236   ⟸   ENSMUST00000108595
RefSeq Acc Id: ENSMUSP00000104235   ⟸   ENSMUST00000108594
RefSeq Acc Id: ENSMUSP00000117394   ⟸   ENSMUST00000147437
RefSeq Acc Id: ENSMUSP00000136578   ⟸   ENSMUST00000127437
RefSeq Acc Id: ENSMUSP00000136063   ⟸   ENSMUST00000142788
RefSeq Acc Id: XP_036012748   ⟸   XM_036156855
- Peptide Label: isoform X2

Promoters
RGD ID:6820763
Promoter ID:MM_KWN:8160
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000108593,   OTTMUST00000013548,   OTTMUST00000013549,   OTTMUST00000038441,   OTTMUST00000038442,   OTTMUST00000038444,   OTTMUST00000038445,   UC007JTD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,793,791 - 69,794,377 (+)MPROMDB
RGD ID:6821694
Promoter ID:MM_KWN:8161
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:ENSMUST00000108594,   ENSMUST00000108595,   NR_027977
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,794,671 - 69,795,171 (-)MPROMDB
RGD ID:8675266
Promoter ID:EPDNEW_M15663
Type:initiation region
Name:Elp5_1
Description:Mus musculus elongator acetyltransferase complex subunit 5 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15664  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381169,980,263 - 69,980,323EPDNEW
RGD ID:8675268
Promoter ID:EPDNEW_M15664
Type:initiation region
Name:Elp5_2
Description:Mus musculus elongator acetyltransferase complex subunit 5 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15663  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381169,980,570 - 69,980,630EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1859017 AgrOrtholog
Ensembl Genes ENSMUSG00000018565 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000104235 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000104236 UniProtKB/TrEMBL
  ENSMUSP00000117394 UniProtKB/TrEMBL
  ENSMUSP00000136063 UniProtKB/TrEMBL
  ENSMUSP00000136484 UniProtKB/TrEMBL
  ENSMUSP00000136578 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000108594 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000108595 UniProtKB/TrEMBL
  ENSMUST00000127437 UniProtKB/TrEMBL
  ENSMUST00000142788 UniProtKB/TrEMBL
  ENSMUST00000143175 UniProtKB/TrEMBL
  ENSMUST00000147437 UniProtKB/TrEMBL
InterPro Elp5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:54351 UniProtKB/Swiss-Prot
MGD MGI:1859017 ENTREZGENE
NCBI Gene 54351 ENTREZGENE
PANTHER PTHR15641 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Elong_Iki1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Elp5 PhenoGen
UniProt B1AR48_MOUSE UniProtKB/TrEMBL
  ELP5_MOUSE UniProtKB/Swiss-Prot
  F8WIE7_MOUSE UniProtKB/TrEMBL
  J3QJV1_MOUSE UniProtKB/TrEMBL
  J3QMW4_MOUSE UniProtKB/TrEMBL
  J3QN35_MOUSE UniProtKB/TrEMBL
  Q99L85 ENTREZGENE
UniProt Secondary O08973 UniProtKB/Swiss-Prot
  Q9CUX2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-09-19 Elp5  elongator acetyltransferase complex subunit 5  Rai12  retinoic acid induced 12  Symbol and/or name change 5135510 APPROVED