Tmem42 (transmembrane protein 42)

Gene: Tmem42 (transmembrane protein 42) Mus musculus

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Symbol:

Tmem42

Name:

transmembrane protein 42

Description:

; FOUND IN integral component of membrane (inferred); membrane (inferred); INTERACTS WITH 1,2-dichloroethane; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

0610027O18Rik; 4933429E06Rik; AV003444; D9Ertd662e; MGC29956

Orthologs:

Homo sapiens (human) : TMEM42 (transmembrane protein 42) HGNC Alliance
Rattus norvegicus (Norway rat) : Tmem42 (transmembrane protein 42) Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM42 (transmembrane protein 42)
Canis lupus familiaris (dog) : TMEM42 (transmembrane protein 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem42 (transmembrane protein 42)
Sus scrofa (pig) : TMEM42 (transmembrane protein 42)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM42 (transmembrane protein 42)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tmem42 (transmembrane protein 42)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM42 (transmembrane protein 42)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM42 (transmembrane protein 42)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem42 (transmembrane protein 42)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM42 (transmembrane protein 42)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tmem42 (transmembrane protein 42)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Homo sapiens (human):	TMEM42 (transmembrane protein 42)	Alliance	DIOPT (HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam)
Caenorhabditis elegans (roundworm):	F40F8.3	Alliance	DIOPT (OrthoFinder, PANTHER, TreeFam)
Drosophila melanogaster (fruit fly):	CG42495	Alliance	DIOPT (OrthoFinder, PANTHER)
Danio rerio (zebrafish):	tmem42a	Alliance	DIOPT (Ensembl Compara, OMA, OrthoFinder, PANTHER, ZFIN)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm38	9	123,021,007 - 123,023,491 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
MGSCv37	9	122,930,444 - 122,932,609 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	122,870,024 - 122,872,181 (+)	NCBI			mm8
Celera	9	123,474,978 - 123,477,288 (+)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI
cM Map	9	73.52	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation (Toggle Annotation Detail/Summary View)

Gene-Chemical Interaction Annotations

Gene Ontology Annotations

Phenotype Annotations

References - curated

References - uncurated

Genomics

Comparative Map Data

Position Markers

QTLs in Region (GRCm38)

miRNA Target Status

Sequence

Nucleotide Sequences

Protein Sequences

Promoters

Additional Information

External Database Links

More on Tmem42
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: mm9 mm10
	MGI Report
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	1615900
Created:	2007-04-30
Species:	Mus musculus
Last Modified:	2019-09-12
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)