Gpr15 (G protein-coupled receptor 15) - Rat Genome Database
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Gene: Gpr15 (G protein-coupled receptor 15) Mus musculus
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Symbol: Gpr15
Name: G protein-coupled receptor 15
RGD ID: 1615859
MGI Page MGI
Description: Exhibits G protein-coupled receptor activity. Involved in T cell migration. Predicted to localize to endosome and plasma membrane. Orthologous to human GPR15 (G protein-coupled receptor 15); INTERACTS WITH dextran sulfate; pirinixic acid; titanium dioxide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4933439K08Rik; G-protein coupled receptor 15
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391658,537,006 - 58,539,235 (-)NCBIGRCm39mm39
GRCm381658,716,643 - 58,718,872 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1658,717,433 - 58,719,070 (-)EnsemblGRCm38mm10GRCm38
MGSCv371658,717,548 - 58,718,837 (-)NCBIGRCm37mm9NCBIm37
MGSCv361658,659,978 - 58,661,613 (-)NCBImm8
Celera1659,008,102 - 59,009,391 (-)NCBICelera
Cytogenetic Map16C1.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21827743   PMID:21873635   PMID:23661644  
PMID:24838826   PMID:25531831   PMID:28078348   PMID:28386128   PMID:28900043   PMID:28936214   PMID:30935778  


Genomics

Comparative Map Data
Gpr15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391658,537,006 - 58,539,235 (-)NCBIGRCm39mm39
GRCm381658,716,643 - 58,718,872 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1658,717,433 - 58,719,070 (-)EnsemblGRCm38mm10GRCm38
MGSCv371658,717,548 - 58,718,837 (-)NCBIGRCm37mm9NCBIm37
MGSCv361658,659,978 - 58,661,613 (-)NCBImm8
Celera1659,008,102 - 59,009,391 (-)NCBICelera
Cytogenetic Map16C1.2NCBI
GPR15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl398,531,978 - 98,534,681 (+)EnsemblGRCh38hg38GRCh38
GRCh38398,531,978 - 98,534,681 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37398,250,743 - 98,251,994 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36399,733,568 - 99,734,650 (+)NCBINCBI36hg18NCBI36
Build 34399,733,567 - 99,734,650NCBI
Celera396,642,535 - 96,643,617 (+)NCBI
Cytogenetic Map3q11.2NCBI
HuRef395,622,878 - 95,624,129 (+)NCBIHuRef
CHM1_1398,213,900 - 98,216,680 (+)NCBICHM1_1
Gpr15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01143,992,739 - 44,004,189 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1144,001,579 - 44,003,664 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01147,191,271 - 47,193,356 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41142,709,928 - 42,712,013 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11142,767,516 - 42,768,599 (+)NCBI
Celera1141,697,724 - 41,699,809 (+)NCBICelera
Cytogenetic Map11q12NCBI
Gpr15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955427115,513 - 119,710 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955427115,513 - 137,557 (+)NCBIChiLan1.0ChiLan1.0
GPR15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13102,311,074 - 102,313,840 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3102,311,203 - 102,312,285 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0395,627,750 - 95,630,518 (+)NCBIMhudiblu_PPA_v0panPan3
GPR15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl335,396,083 - 5,397,165 (+)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1335,368,509 - 5,380,024 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gpr15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366304,459,213 - 4,462,285 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13160,385,646 - 160,391,028 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113160,386,727 - 160,390,965 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213170,557,577 - 170,579,565 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GPR15
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12282,314,259 - 82,317,204 (-)NCBI
ChlSab1.1 Ensembl2282,314,491 - 82,315,573 (-)Ensembl
Gpr15
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478911,401,196 - 11,402,337 (+)NCBI

Position Markers
Gpr15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381658,717,915 - 58,718,714UniSTSGRCm38
MGSCv371658,718,028 - 58,718,827UniSTSGRCm37
Celera1659,008,582 - 59,009,381UniSTS
Cytogenetic Map16C1.2UniSTS
cM Map16 UniSTS
UniSTS:487464  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381658,717,642 - 58,718,724UniSTSGRCm38
MGSCv371658,717,755 - 58,718,837UniSTSGRCm37
Celera1659,008,309 - 59,009,391UniSTS
Cytogenetic Map16C1.2UniSTS
UniSTS:490698  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381658,717,435 - 58,718,724UniSTSGRCm38
MGSCv371658,717,548 - 58,718,837UniSTSGRCm37
Celera1659,008,102 - 59,009,391UniSTS
Cytogenetic Map16C1.2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226785Feml12_mfemur length 12, 5 week (mouse)16350000064800000Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16400000064800000Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16672511565669666Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16860000091100000Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162020057985803938Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162897245062972589Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162897245062972589Mouse
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162897245062972589Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162897245062972589Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163249243266492570Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3270409165669666Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163562627392776120Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163750000084900000Mouse
4142112Skts-fp3_mskin tumor susceptibility in FVB and PWK 3 (mouse)Not determined164023351973127497Mouse
11522747Eae41_mexperimental allergic encephalomyelitis susceptibility 41 (mouse)164057877278218584Mouse
1301138Pcd4ts3_mp-glycoprotein positive CD4 T cell subset 3 (mouse)Not determined164077356074773713Mouse
1357778Diobq_mdiet-induced obesity QTL (mouse)Not determined164237745482534286Mouse
1301719Remslp3_mrapid eye movement sleep 3 (mouse)Not determined164456298778563143Mouse
4141212Imraq3_mimmune response to AAV2 QTL 3 (mouse)Not determined164456298778563143Mouse
10053677Eae46_mexperimental allergic encephalomyelitis susceptibility 46 (mouse)Not determined164539769878952955Mouse
1558836Dice1b_mdetermination of interleukin 4 commitment 1b (mouse)Not determined164569063772477597Mouse
14928310Manh80_mmandible shape 80 (mouse)164842295582422955Mouse
1301394Eae11_msusceptibility to experimental allergic encephalomyelitis 11 (mouse)Not determined165376500387765147Mouse
1301364Lith14_mlithogenic gene 14 (mouse)Not determined165586495889865073Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:85
Interacting mature miRNAs:93
Transcripts:ENSMUST00000089318
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000089318   ⟹   ENSMUSP00000086731
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1658,717,433 - 58,719,070 (-)Ensembl
RefSeq Acc Id: NM_001162955   ⟹   NP_001156427
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391658,537,006 - 58,539,235 (-)NCBI
GRCm381658,716,643 - 58,718,872 (-)NCBI
MGSCv371658,717,548 - 58,718,837 (-)RGD
Celera1659,008,102 - 59,009,391 (-)RGD
cM Map16 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001156427   ⟸   NM_001162955
- UniProtKB: Q0VDU3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000086731   ⟸   ENSMUST00000089318


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918473 AgrOrtholog
Ensembl Genes ENSMUSG00000047293 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000086731 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000089318 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot
KEGG Report mmu:71223 UniProtKB/Swiss-Prot
MGD MGI:1918473 ENTREZGENE
NCBI Gene 71223 ENTREZGENE
Pfam 7tm_1 UniProtKB/Swiss-Prot
PhenoGen Gpr15 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot
UniProt GPR15_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary E9QKY6 UniProtKB/Swiss-Prot
  Q3B800 UniProtKB/Swiss-Prot