Tex21 (testis expressed gene 21) - Rat Genome Database

Name: Tex21
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Tex21 (testis expressed gene 21) Mus musculus

Analyze

Symbol:

Tex21

Name:

testis expressed gene 21

RGD ID:

1615787

MGI Page

MGI

Description:

Orthologous to human TEX21P (testis expressed 21, pseudogene).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4931406F04Rik; 4931412D23Rik; 4931421K24Rik; MGC118241; testis expressed gene 11; tsec-; tsec-2; uncharacterized protein LOC80384

RGD Orthologs

Human

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	76,245,460 - 76,293,532 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	76,245,460 - 76,293,520 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	76,198,686 - 76,246,758 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	76,198,686 - 76,246,746 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	77,299,674 - 77,347,733 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	77,117,533 - 77,165,556 (-)	NCBI		MGSCv36	mm8
Celera	12	77,292,874 - 77,337,490 (-)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	33.52	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3',4,4',5-Pentachlorobiphenyl (EXP)

all-trans-retinoic acid (EXP)

mono(2-ethylhexyl) phthalate (EXP)

tebuconazole (ISO)

triptonide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal gait (IEA)

decreased heart rate (IEA)

increased mean corpuscular hemoglobin (IEA)

increased mean corpuscular volume (IEA)

prolonged RR interval (IEA)

References

Additional References at PubMed

PMID:10349636	PMID:10520738	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:12904583	PMID:14610273	PMID:16141072	PMID:16141073	PMID:18799693
PMID:21267068

Genomics

Comparative Map Data

Tex21
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	76,245,460 - 76,293,532 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	76,245,460 - 76,293,520 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	76,198,686 - 76,246,758 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	76,198,686 - 76,246,746 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	77,299,674 - 77,347,733 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	77,117,533 - 77,165,556 (-)	NCBI		MGSCv36	mm8
Celera	12	77,292,874 - 77,337,490 (-)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	33.52	NCBI

TEX21P
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	64,345,473 - 64,347,611 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	64,346,171 - 64,374,666 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	64,812,191 - 64,814,329 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	63,882,610 - 63,884,140 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	44,869,938 - 44,872,076 (-)	NCBI		Celera
Cytogenetic Map	14	q23.3	NCBI
HuRef	14	44,984,804 - 44,986,942 (-)	NCBI		HuRef
CHM1_1	14	64,752,000 - 64,754,138 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	58,553,177 - 58,555,315 (-)	NCBI		T2T-CHM13v2.0

Variants

Variants in Tex21
1802 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	73
Count of miRNA genes:	71
Interacting mature miRNAs:	73
Transcripts:	ENSMUST00000021453
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142234	Tmc1m3_m	Tmc1 modifier 3 (mouse)			Not determined		12	5418440	77031203	Mouse
27226753	Femd7_m	femur midshaft diameter 7, 10 week (mouse)					12	9550000	84146774	Mouse
13207568	Tcq14_m	total cholesterol QTL 14 (mouse)					12	11660001	97176774	Mouse
1558978	Cplaq10_m	circadian period of locomotor activity 10 (mouse)			Not determined		12	15341026	79040364	Mouse
1301574	Lmblgq5_m	limb length QTL 5 (mouse)			Not determined		12	17596447	80956883	Mouse
4142002	Tbqt3_m	tibia bone quality traits 3 (mouse)			Not determined		12	35285496	109936243	Mouse
1357479	Splwt1_m	spleen weight 1 (mouse)			Not determined		12	41693175	90887526	Mouse
1357757	Lnopy2_m	lens opacity 2 (mouse)			Not determined		12	52846626	86846796	Mouse
1357749	Vtbt13_m	vertebral trabecular bone trait 13 (mouse)			Not determined		12	53132002	87132145	Mouse
12832727	Ahrq1_m	airway hyperresponsiveness QTL 1 (mouse)					12	54695910	82665939	Mouse
27226728	Tibl20_m	tibia length 20, 16 week (mouse)					12	59146786	93866774	Mouse
27226776	Tibl6_m	tibia length 6, 5 week (mouse)					12	60646786	92666774	Mouse
10043948	Pbft6_m	percent body fat 6 (mouse)			Not determined		12	61205427	95205427	Mouse
1301476	Pbwg12_m	postnatal body weight growth 12 (mouse)			Not determined		12	62040164	96040364	Mouse
27226797	Scvln19_m	sacral vertebrae length 2, 16 week (mouse)					12	62146786	99466259	Mouse
10043895	Bw20_m	body weight QTL 20 (mouse)			Not determined		12	62308252	96308252	Mouse
1301046	Par3_m	pulmonary adenoma resistance 3 (mouse)			Not determined		12	63956708	97956883	Mouse
1301337	Cdcs8_m	cytokine deficiency colitis susceptibility 8 (mouse)			Not determined		12	64689083	98689229	Mouse
1300633	Cdcs7_m	cytokine deficiency colitis susceptibility 7 (mouse)			Not determined		12	64689083	98689229	Mouse
14746976	Manh73_m	mandible shape 73 (mouse)					12	65857131	99857131	Mouse
27226771	Tibl14_m	tibia length 14, 10 week (mouse)					12	68346774	98766259	Mouse
27226793	Feml10_m	femur length 10, 5 week (mouse)					12	68346774	113363620	Mouse
4141738	Tgq23_m	triglyceride QTL 23 (mouse)			Not determined			72112877	106112877	Mouse
1301926	Adip6_m	adiposity 6 (mouse)			Not determined		12	73887422	107887526	Mouse
1301689	Skull18_m	skull morphology 18 (mouse)			Not determined		12	73887422	107887526	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001159532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_019784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006516393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006516394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB000682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC120002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC164121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC100432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX638105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR520719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000021453 ⟹ ENSMUSP00000021453

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	76,245,460 - 76,293,517 (-)	Ensembl
GRCm38.p6 Ensembl	12	76,198,686 - 76,246,743 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000218426 ⟹ ENSMUSP00000151515

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	76,250,760 - 76,293,520 (-)	Ensembl
GRCm38.p6 Ensembl	12	76,203,986 - 76,246,746 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000219327 ⟹ ENSMUSP00000151892

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	76,268,310 - 76,293,459 (-)	Ensembl
GRCm38.p6 Ensembl	12	76,221,536 - 76,246,685 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000220068

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	76,261,260 - 76,276,238 (-)	Ensembl
GRCm38.p6 Ensembl	12	76,214,486 - 76,229,464 (-)	Ensembl

RefSeq Acc Id:

NM_001159532 ⟹ NP_001153004

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	76,250,759 - 76,293,520 (-)	NCBI
GRCm38	12	76,203,985 - 76,246,746 (-)	NCBI
MGSCv37	12	77,299,674 - 77,347,733 (-)	RGD
Celera	12	77,292,874 - 77,337,490 (-)	RGD
cM Map	12		ENTREZGENE

Sequence:

show sequence

ATTCTACTGGCAAATTATGCAGGATGCCCCATCACTAGGGGGTCTCCTGGGAATTGATCTTGGA
TTTGGGATTTTCTCTTGATCATGTAATGAAACTAGGTCCACATTTTCTACAAGAAACAAATTCA
GCAGGCAGCTCCTTTTGGGGCCTAAGCACTGGAGACACTCCTAGAAGTTTCTGGAAATCTTTGT
TGTTGGCCCTGAAAGACCTCGACCTCTCGTCCTGAGCGCTATACAGAAACTTCCCGTAGAGGCA
CTGTGGGTCACCGTTGGTGGATCTGTTGTATGCTTCCTGTGCCTCCAACATGTCAAGGCCACTC
CAGCCTGTAAGTCACTCGGACCCAGGGAGGCTTGCCAATAGCCAAACCAAAGAGGCCTGTGAGG
CTAAGCCACCAGAAGCCAGGCACCTATCACATCTATCGGCTCGGGAAAATGTCCCAGTGGCTTG
TTTTGATCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCC
GACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGACTCTTTTAGCTGAGCTGA
GAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGAAGGCTGAGTTAGA
GAGTTACAAAGAAAGGAATGCCCAGCAGGAGCTACAGATAATATCCCTGAGAGATGACATCAAG
AGCCTTCAGGACCTTATTGATTCTCTAATGAAGATGAAGATTTTGAAAAACACAAATTCTCAGA
ATTTTGGAAGACACAACTGGGATCTAACTGAGAGAGTTCTAGATCTAGAGAACCGTTTAAGGGA
ACATCTGGTGGGAAGAGAGGAGATTAAGGCGGAGCTTCTGGAGAAGAGGCGGTCCTGCCCCAGC
AGCTTCTCGCCCTATATGAATCTGAAAGGACCGGAAGATTCCTTGGATATTTTCCCAGTGAAGG
ACAATGATGAAGTCTACAATTTGAAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATTGATGG
GCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAGCTAACGTCTGAGTTG
GACAGAGCTCCGTTTTCCTGCGGCTGGGAAACCACACCTGAGCAATCCCATCACCAGGATTTCC
TCGGTCAGTTGGCCACTCTCCTGAGTGACAGCATCGGCCCTATACTAGCCACAGAGGAAGCGGT
GAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTG
CAGCAGGAAATCCAGACGCTCACCAAGAGACTTGAGCAGCTCTACCGCCTTTATGAAGAAGCCC
AGACTGAAGAAAATTACACGGAACAGGAAAGACCCTTGGGACCCCTGGAAGGAAAGGTTGCTGT
CAGCTGCTCTCTGAGGAACTTAGATGTGGGCAGGAAGAAAGAAAACTCCAGGACCCGGACTGCC
CACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATTCCA
AGATGGCTGCAGCCCCAAGGATGGAGGAGAAAATCCAGAGACTTCAGAAGCAGCTTAGTGATTT
GAAATTGTCAAACAAAAACATGAAGACTCAACTAACGAGAATAAATGTCCTTAAAGACAAAACA
ATTGAGAGGCTCAGGCAATCTGTAACAAAAGTTGAAACCTTGAAAGAGAAGACAGCAGCCAAAA
CAGACAACTTGAAAACCCCATCAGATCCTGCGGAGCAGGGAGCAAGACCAGAAAAGGAGAGGGC
CCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTC
TCAGGACGAGAGCAAGAGGTCTCTTTCTTATGAAGCTAAAAACTAATTTCATTGACGTGATCAA
CACTTACCTCAATTTAGACTTCACCTAACTTTGACAATAAAGGATTTATTAGCTAATGGCA

hide sequence

RefSeq Acc Id:

NM_019784 ⟹ NP_062758

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	76,245,461 - 76,293,520 (-)	NCBI
GRCm38	12	76,198,687 - 76,246,746 (-)	NCBI
MGSCv37	12	77,299,674 - 77,347,733 (-)	RGD
Celera	12	77,292,874 - 77,337,490 (-)	RGD
cM Map	12		ENTREZGENE

Sequence:

show sequence

ATTCTACTGGCAAATTATGCAGGATGCCCCATCACTAGGGGGTCTCCTGGGAATTGATCTTGGA
TTTGGGATTTTCTCTTGATCATGTAATGAAACTAGGTCCACATTTTCTACAAGAAACAAATTCA
GCAGGCAGCTCCTTTTGGGGCCTAAGCACTGGAGACACTCCTAGAAGTTTCTGGAAATCTTTGT
TGTTGGCCCTGAAAGACCTCGACCTCTCGTCCTGAGCGCTATACAGAAACTTCCCGTAGAGGCA
CTGTGGGTCACCGTTGGTGGATCTGTTGTATGCTTCCTGTGCCTCCAACATGTCAAGGCCACTC
CAGCCTGTAAGTCACTCGGACCCAGGGAGGCTTGCCAATAGCCAAACCAAAGAGGCCTGTGAGG
CTAAGCCACCAGAAGCCAGGCACCTATCACATCTATCGGCTCGGGAAAATGTCCCAGTGGCTTG
TTTTGATCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCC
GACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGACTCTTTTAGCTGAGCTGA
GAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGAAGGCTGAGTTAGA
GAGTTACAAAGAAAGGAATGCCCAGCAGGAGCTACAGATAATATCCCTGAGAGATGACATCAAG
AGCCTTCAGGACCTTATTGATTCTCTAATGAAGATGAAGATTTTGAAAAACACAAATTCTCAGA
ATTTTGGAAGACACAACTGGGATCTAACTGAGAGAGTTCTAGATCTAGAGAACCGTTTAAGGGA
ACATCTGGTGGGAAGAGAGGAGATTAAGGCGGAGCTTCTGGAGAAGAGGCGGTCCTGCCCCAGC
AGCTTCTCGCCCTATATGAATCTGAAAGGACCGGAAGATTCCTTGGATATTTTCCCAGTGAAGG
ACAATGATGAAGTCTACAATTTGAAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATTGATGG
GCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAGCTAACGTCTGAGTTG
GACAGAGCTCCGTTTTCCTGCGGCTGGGAAACCACACCTGAGCAATCCCATCACCAGGATTTCC
TCGGTCAGTTGGCCACTCTCCTGAGTGACAGCATCGGCCCTATACTAGCCACAGAGGAAGCGGT
GAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTG
CAGCAGGAAATCCAGACGCTCACCAAGAGACTTGAGCAGCTCTACCGCCTTTATGAAGAAGCCC
AGACTGAAGAAAATTACACGGAACAGGAAAGACCCTTGGGACCCCTGGAAGGAAAGGTTGCTGT
CAGCTGCTCTCTGAGGAACTTAGATGTGGGCAGGAAGAAAGAAAACTCCAGGACCCGGACTGCC
CACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATTCCA
AGATGGCTGCAGCCCCAAGGATGGAGGAGAAAATCCAGAGACTTCAGAAGCAGCTTAGTGATTT
GAAATTGTCAAACAAAAACATGAAGACTCAACTAACGAGAATAAATGTCCTTAAAGACAAAACA
ATTGAGAGGCTCAGGCAATCTGTAACAAAAGTTGAAACCTTGAAAGAGAAGACAGCAGCCAAAA
CAGACAACTTGAAAACCCCATCAGATCCTGCGGAGCAGGGAGCAAGACCAGAAAAGGAGAGGGC
CCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTC
TCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCCATCATGAAGATGCTGGGATTTAACA
TGAAAACAGCAGACAAGGATGTCATTAATCGGCTGAAGCTTGTCGTCCAAATTTATGAAATTTC
TAAAAGATCAAAGATGGCTTCTCACTGTGAGCCTGGTCAGGCCAAGTGAGCAAGATCTACCTCT
ATATGCGGTTAAGAAGTTATACACAGCTGTTTCCTACAGCACCCAGAAAATAGCTACATTGTGA
ATAAAATTGCAACATTTCAACTAAAAA

hide sequence

RefSeq Acc Id:

XM_006516393 ⟹ XP_006516456

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	76,245,460 - 76,287,020 (-)	NCBI
GRCm38	12	76,198,686 - 76,240,246 (-)	NCBI

Sequence:

show sequence

TGGTGTATGTACACATATGTGTATAATTGTGTGCATGTGTGAACAGGCTTGCAGGTCAGAAGAG
CATGTAGGGTGTCCACCACTCTCATCCCTTATTCTATTCCTCGAAGGCAGAGTCACTCCCTGAA
CTTGGAGCTTGTAGTTTTTCTCTGTCTAGACTAGCAGCCACCAAGCCTCAGAAATCCTCCCGTC
TCCACCCTGGCCTGCCCAGCGCAGTCTACAGGCCTGCTCAGGACCATGATTTGCTTTTTATAGG
GATGCTGCAATCTGAACTCTTGACCTCATATGCTTGCCTGCTTAGCCATCCCCCTTGCCCTGTT
TAGAGTTAGCTACACATGGAAATGTCTCGGGATGGTTTATGTACGTTGCCTTGATTCCTGTACT
CTCAGAGATCACAGCACAGAATTCAGACGGGCTGCATTTGCTTCCTGCAGGTAGAAACTGTTAG
GCTTGTTTTGATCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGG
CAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGACTCTTTTAGCTGA
GCTGAGAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGAAGGCTGAG
TTAGAGAGTTACAAAGAAAGGAATGCCCAGCAGGAGCTACAGATAATATCCCTGAGAGATGACA
TCAAGAGCCTTCAGGACCTTATTGATTCTCTAATGAAGATGAAGATTTTGAAAAACACAAATTC
TCAGAATTTTGGAAGACACAACTGGGATCTAACTGAGAGAGTTCTAGATCTAGAGAACCGTTTA
AGGGAACATCTGGTGGGAAGAGAGGAGATTAAGGCGGAGCTTCTGGAGAAGAGGCGGTCCTGCC
CCAGCAGCTTCTCGCCCTATATGAATCTGAAAGGACCGGAAGATTCCTTGGATATTTTCCCAGT
GAAGGACAATGATGAAGTCTACAATTTGAAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATT
GATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAGCTAACGTCTG
AGTTGGACAGAGCTCCGTTTTCCTGCGGCTGGGAAACCACACCTGAGCAATCCCATCACCAGGA
TTTCCTCGGTCAGTTGGCCACTCTCCTGAGTGACAGCATCGGCCCTATACTAGCCACAGAGGAA
GCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAG
CCCTGCAGCAGGAAATCCAGACGCTCACCAAGAGACTTGAGCAGCTCTACCGCCTTTATGAAGA
AGCCCAGACTGAAGAAAATTACACGGAACAGGAAAGACCCTTGGGACCCCTGGAAGGAAAGGTT
GCTGTCAGCTGCTCTCTGAGGAACTTAGATGTGGGCAGGAAGAAAGAAAACTCCAGGACCCGGA
CTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAA
TTCCAAGATGGCTGCAGCCCCAAGGATGGAGGAGAAAATCCAGAGACTTCAGAAGCAGCTTAGT
GATTTGAAATTGTCAAACAAAAACATGAAGACTCAACTAACGAGAATAAATGTCCTTAAAGACA
AAACAATTGAGAGGCTCAGGCAATCTGTAACAAAAGTTGAAACCTTGAAAGAGAAGACAGCAGC
CAAAACAGACAACTTGAAAACCCCATCAGATCCTGCGGAGCAGGGAGCAAGACCAGAAAAGGAG
AGGGCCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAG
GGCTCTCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCCATCATGAAGATGCTGGGATT
TAACATGAAAACAGCAGACAAGGATGTCATTAATCGGCTGAAGCTTGTCGTCCAAATTTATGAA
ATTTCTAAAAGATCAAAGATGGCTTCTCACTGTGAGCCTGGTCAGGCCAAGTGAGCAAGATCTA
CCTCTATATGCGGTTAAGAAGTTATACACAGCTGTTTCCTACAGCACCCAGAAAATAGCTACAT
TGTGAATAAAATTGCAACATTTCAACTAAAAAA

hide sequence

RefSeq Acc Id:

XM_006516394 ⟹ XP_006516457

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	76,245,461 - 76,293,532 (-)	NCBI
GRCm38	12	76,198,687 - 76,246,758 (-)	NCBI

Sequence:

show sequence

TGACATGGAAACATTCTACTGGCAAATTATGCAGGATGCCCCATCACTAGGGGGTCTCCTGGGA
ATTGATCTTGGATTTGGGATTTTCTCTTGATCATGTAATGAAACTAGGTCCACATTTTCTACAA
GAAACAAATTCAGCAGGCAGCTCCTTTTGGGGCCTAAGCACTGGAGACACTCCTAGAAGTTTCT
GGAAATCTTTGTTGTTGGCCCTGAAAGACCTCGACCTCTCGTCCTGAGCGCTATACAGAAACTT
CCCGTAGAGGCACTGTGGGTCACCGTTGGTGGATCTGTTGTATGCTTCCTGTGCCTCCAACATG
TCAAGGCCACTCCAGCCTGTAAGTCACTCGGACCCAGGGAGGCTTGCCAATAGCCAAACCAAAG
AGGCCTGTGAGGCTAAGCCACCAGAAGCCAGGCACCTATCACATCTATCGGCTCGGGAAAATGT
CCCAGTGGCTTGTTTTGATCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAAC
AAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGACTCTTT
TAGCTGAGCTGAGAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGAA
GGCTGAGTTAGAGAGTTACAAAGAAAGGAATGCCCAGCAGGAGCTACAGATAATATCCCTGAGA
GATGACATCAAGAGCCTTCAGGACCTTATTGATTCTCTAATGAAGATGAAGATTTTGAAAAACA
CAAATTCTCAGAATTTTGGAAGACACAACTGGGATCTAACTGAGAGAGTTCTAGATCTAGAGAA
CCGTTTAAGGGAACATCTGGTGGGAAGAGAGGAGATTAAGGCGGAGCTTCTGGAGAAGAGGCGG
TCCTGCCCCAGCAGCTTCTCGCCCTATATGAATCTGAAAGGACCGGAAGATTCCTTGGATATTT
TCCCAGTGAAGGACAATGATGAAGTCTACAATTTGAAGAGAGGCAGTGTTGTTTACTCTGAGGG
ACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAGCTA
ACGTCTGAGTTGGACAGAGCTCCGTTTTCCTGCGGCTGGGAAACCACACCTGAGCAATCCCATC
ACCAGGATTTCCTCGGTCAGTTGGCCACTCTCCTGAGTGACAGCATCGGCCCTATACTAGCCAC
AGAGGAAGCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCGAA
AACTCCAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTAT
TGGATATTGAGCAGAATTCCAAGATGGCTGCAGCCCCAAGGATGGAGGAGAAAATCCAGAGACT
TCAGAAGCAGCTTAGTGATTTGAAATTGTCAAACAAAAACATGAAGACTCAACTAACGAGAATA
AATGTCCTTAAAGACAAAACAATTGAGAGGCTCAGGCAATCTGTAACAAAAGTTGAAACCTTGA
AAGAGAAGACAGCAGCCAAAACAGACAACTTGAAAACCCCATCAGATCCTGCGGAGCAGGGAGC
AAGACCAGAAAAGGAGAGGGCCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTC
AGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCCATCA
TGAAGATGCTGGGATTTAACATGAAAACAGCAGACAAGGATGTCATTAATCGGCTGAAGCTTGT
CGTCCAAATTTATGAAATTTCTAAAAGATCAAAGATGGCTTCTCACTGTGAGCCTGGTCAGGCC
AAGTGAGCAAGATCTACCTCTATATGCGGTTAAGAAGTTATACACAGCTGTTTCCTACAGCACC
CAGAAAATAGCTACATTGTGAATAAAATTGCAACATTTCAACTAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001153004	(Get FASTA)	NCBI Sequence Viewer
	NP_062758	(Get FASTA)	NCBI Sequence Viewer
	XP_006516456	(Get FASTA)	NCBI Sequence Viewer
	XP_006516457	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI00433	(Get FASTA)	NCBI Sequence Viewer
	BAA85932	(Get FASTA)	NCBI Sequence Viewer
	BAB30233	(Get FASTA)	NCBI Sequence Viewer
	BAB30254	(Get FASTA)	NCBI Sequence Viewer
	EDL36468	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000021453
	ENSMUSP00000021453.5
	ENSMUSP00000151515
	ENSMUSP00000151515.2
	ENSMUSP00000151892.2

RefSeq Acc Id:	NP_062758 ⟸ NM_019784
- Peptide Label:	isoform 1
- UniProtKB:	Q9D4K1 (UniProtKB/TrEMBL), Q9R0U9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRPLQPVSHSDPGRLANSQTKEACEAKPPEARHLSHLSARENVPVACFDPPLEMDPTGNPIIH NKKAADPVHPDLASMLVKNKTLLAELRNLQSKLYVKETSLQEVKAELESYKERNAQQELQIISL RDDIKSLQDLIDSLMKMKILKNTNSQNFGRHNWDLTERVLDLENRLREHLVGREEIKAELLEKR RSCPSSFSPYMNLKGPEDSLDIFPVKDNDEVYNLKRGSVVYSEGPIDGQTTGDKCQQDLIHQEK LTSELDRAPFSCGWETTPEQSHHQDFLGQLATLLSDSIGPILATEEAVKERIQEMGANEQSWKC KAEALQQEIQTLTKRLEQLYRLYEEAQTEENYTEQERPLGPLEGKVAVSCSLRNLDVGRKKENS RTRTAHIDKHSKFKKLEMLLDIEQNSKMAAAPRMEEKIQRLQKQLSDLKLSNKNMKTQLTRINV LKDKTIERLRQSVTKVETLKEKTAAKTDNLKTPSDPAEQGARPEKERAHQTPAQSLPDPSTVRA VLKGLSGREQELADFREAIMKMLGFNMKTADKDVINRLKLVVQIYEISKRSKMASHCEPGQAK hide sequence

RefSeq Acc Id:	NP_001153004 ⟸ NM_001159532
- Peptide Label:	isoform 2
- UniProtKB:	Q497Q3 (UniProtKB/TrEMBL), Q9D4K1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRPLQPVSHSDPGRLANSQTKEACEAKPPEARHLSHLSARENVPVACFDPPLEMDPTGNPIIH NKKAADPVHPDLASMLVKNKTLLAELRNLQSKLYVKETSLQEVKAELESYKERNAQQELQIISL RDDIKSLQDLIDSLMKMKILKNTNSQNFGRHNWDLTERVLDLENRLREHLVGREEIKAELLEKR RSCPSSFSPYMNLKGPEDSLDIFPVKDNDEVYNLKRGSVVYSEGPIDGQTTGDKCQQDLIHQEK LTSELDRAPFSCGWETTPEQSHHQDFLGQLATLLSDSIGPILATEEAVKERIQEMGANEQSWKC KAEALQQEIQTLTKRLEQLYRLYEEAQTEENYTEQERPLGPLEGKVAVSCSLRNLDVGRKKENS RTRTAHIDKHSKFKKLEMLLDIEQNSKMAAAPRMEEKIQRLQKQLSDLKLSNKNMKTQLTRINV LKDKTIERLRQSVTKVETLKEKTAAKTDNLKTPSDPAEQGARPEKERAHQTPAQSLPDPSTVRA VLKGLSGREQEVSFL hide sequence

RefSeq Acc Id:	XP_006516457 ⟸ XM_006516394
- Peptide Label:	isoform X2
- UniProtKB:	Q9D4K1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRPLQPVSHSDPGRLANSQTKEACEAKPPEARHLSHLSARENVPVACFDPPLEMDPTGNPIIH NKKAADPVHPDLASMLVKNKTLLAELRNLQSKLYVKETSLQEVKAELESYKERNAQQELQIISL RDDIKSLQDLIDSLMKMKILKNTNSQNFGRHNWDLTERVLDLENRLREHLVGREEIKAELLEKR RSCPSSFSPYMNLKGPEDSLDIFPVKDNDEVYNLKRGSVVYSEGPIDGQTTGDKCQQDLIHQEK LTSELDRAPFSCGWETTPEQSHHQDFLGQLATLLSDSIGPILATEEAVKERIQEMGANEQSWKC ENSRTRTAHIDKHSKFKKLEMLLDIEQNSKMAAAPRMEEKIQRLQKQLSDLKLSNKNMKTQLTR INVLKDKTIERLRQSVTKVETLKEKTAAKTDNLKTPSDPAEQGARPEKERAHQTPAQSLPDPST VRAVLKGLSGREQELADFREAIMKMLGFNMKTADKDVINRLKLVVQIYEISKRSKMASHCEPGQ AK hide sequence

RefSeq Acc Id:	XP_006516456 ⟸ XM_006516393
- Peptide Label:	isoform X1
- UniProtKB:	Q9D4K1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPTGNPIIHNKKAADPVHPDLASMLVKNKTLLAELRNLQSKLYVKETSLQEVKAELESYKERN AQQELQIISLRDDIKSLQDLIDSLMKMKILKNTNSQNFGRHNWDLTERVLDLENRLREHLVGRE EIKAELLEKRRSCPSSFSPYMNLKGPEDSLDIFPVKDNDEVYNLKRGSVVYSEGPIDGQTTGDK CQQDLIHQEKLTSELDRAPFSCGWETTPEQSHHQDFLGQLATLLSDSIGPILATEEAVKERIQE MGANEQSWKCKAEALQQEIQTLTKRLEQLYRLYEEAQTEENYTEQERPLGPLEGKVAVSCSLRN LDVGRKKENSRTRTAHIDKHSKFKKLEMLLDIEQNSKMAAAPRMEEKIQRLQKQLSDLKLSNKN MKTQLTRINVLKDKTIERLRQSVTKVETLKEKTAAKTDNLKTPSDPAEQGARPEKERAHQTPAQ SLPDPSTVRAVLKGLSGREQELADFREAIMKMLGFNMKTADKDVINRLKLVVQIYEISKRSKMA SHCEPGQAK hide sequence

RefSeq Acc Id:

ENSMUSP00000151515 ⟸ ENSMUST00000218426

RefSeq Acc Id:

ENSMUSP00000151892 ⟸ ENSMUST00000219327

RefSeq Acc Id:

ENSMUSP00000021453 ⟸ ENSMUST00000021453

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R0U9-F1-model_v2	AlphaFold	Q9R0U9	1-575	view protein structure

Promoters

RGD ID:

8678560

Promoter ID:

EPDNEW_M17310

Type:

multiple initiation site

Name:

Tex21_1

Description:

Mus musculus testis expressed gene 21 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	76,246,746 - 76,246,806	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1931131	AgrOrtholog
Ensembl Genes	ENSMUSG00000021056	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000021453	ENTREZGENE
	ENSMUST00000021453.6	UniProtKB/TrEMBL
	ENSMUST00000218426	ENTREZGENE
	ENSMUST00000218426.2	UniProtKB/TrEMBL
	ENSMUST00000219327.2	UniProtKB/TrEMBL
InterPro	CCDC170-like	UniProtKB/TrEMBL
KEGG Report	mmu:80384	UniProtKB/TrEMBL
MGD	MGI:1931131	ENTREZGENE
NCBI Gene	80384	ENTREZGENE
PANTHER	PTHR18863	UniProtKB/TrEMBL
	TESTIS-EXPRESSED GENE 21	UniProtKB/TrEMBL
PhenoGen	Tex21	PhenoGen
UniProt	A0A1W2P825_MOUSE	UniProtKB/TrEMBL
	Q497Q3	ENTREZGENE, UniProtKB/TrEMBL
	Q9D4K1	ENTREZGENE, UniProtKB/TrEMBL
	Q9D4L8_MOUSE	UniProtKB/TrEMBL
	Q9R0U9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Mammalian Phenotype