Cdca2 (cell division cycle associated 2) - Rat Genome Database

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Gene: Cdca2 (cell division cycle associated 2) Mus musculus
Analyze
Symbol: Cdca2
Name: cell division cycle associated 2
RGD ID: 1615762
MGI Page MGI
Description: Acts upstream of or within chromosome segregation. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in chromosome and nucleus. Is expressed in several structures, including brain; liver; lung; metanephros; and retina nuclear layer. Orthologous to human CDCA2 (cell division cycle associated 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610311M19Rik; AI586158; cell division cycle-associated protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391467,910,629 - 67,953,290 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1467,913,780 - 67,953,290 (-)EnsemblGRCm39 Ensembl
GRCm381467,673,180 - 67,715,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1467,676,331 - 67,715,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371468,294,411 - 68,333,898 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361466,629,951 - 66,660,755 (-)NCBIMGSCv36mm8
Celera1465,433,981 - 65,473,487 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.66NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
azathioprine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
DDT  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP)
dieldrin  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
folic acid  (EXP)
FR900359  (ISO)
furan  (ISO)
geldanamycin  (ISO)
glycidol  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indometacin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
leflunomide  (ISO)
lucanthone  (ISO)
mercury dichloride  (ISO)
methimazole  (ISO)
miconazole  (EXP)
motexafin gadolinium  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
niclosamide  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
PCB138  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
pinosylvin  (ISO)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (ISO)
streptozocin  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (EXP)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
toluene 2,4-diisocyanate  (EXP)
topotecan  (ISO)
trans-pinosylvin  (ISO)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
trovafloxacin  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)
zinc acetate  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IBA,ISO)
cytosol  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15226823   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:18799693   PMID:19521500   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22801782   PMID:22898775   PMID:24316575   PMID:26410627   PMID:28535371   PMID:32554809  
PMID:33798452   PMID:34321999  


Genomics

Comparative Map Data
Cdca2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391467,910,629 - 67,953,290 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1467,913,780 - 67,953,290 (-)EnsemblGRCm39 Ensembl
GRCm381467,673,180 - 67,715,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1467,676,331 - 67,715,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371468,294,411 - 68,333,898 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361466,629,951 - 66,660,755 (-)NCBIMGSCv36mm8
Celera1465,433,981 - 65,473,487 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.66NCBI
CDCA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38825,458,931 - 25,507,917 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl825,459,199 - 25,507,911 (+)EnsemblGRCh38hg38GRCh38
GRCh37825,316,447 - 25,365,433 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36825,372,428 - 25,421,342 (+)NCBINCBI36Build 36hg18NCBI36
Build 34825,372,429 - 25,421,342NCBI
Celera824,278,060 - 24,326,920 (+)NCBICelera
Cytogenetic Map8p21.2NCBI
HuRef823,861,484 - 23,910,346 (+)NCBIHuRef
CHM1_1825,517,979 - 25,566,826 (+)NCBICHM1_1
T2T-CHM13v2.0825,734,151 - 25,783,086 (+)NCBIT2T-CHM13v2.0
Cdca2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,071,360 - 46,117,524 (-)NCBIGRCr8
mRatBN7.21541,895,946 - 41,942,226 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,895,901 - 41,941,611 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1543,760,646 - 43,806,313 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,910,867 - 44,956,534 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,356,180 - 43,401,847 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,365,396 - 44,411,601 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,365,405 - 44,411,004 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01547,185,590 - 47,231,348 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41547,225,711 - 47,271,412 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11547,241,861 - 47,287,342 (-)NCBI
Celera1541,559,981 - 41,605,879 (-)NCBICelera
Cytogenetic Map15p12NCBI
Cdca2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540348,375,287 - 48,419,955 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540348,374,276 - 48,417,130 (+)NCBIChiLan1.0ChiLan1.0
CDCA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2743,998,888 - 44,049,042 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1819,713,275 - 19,763,433 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0824,739,705 - 24,788,898 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1821,648,782 - 21,697,584 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl821,650,086 - 21,697,584 (+)Ensemblpanpan1.1panPan2
CDCA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12531,943,649 - 31,997,101 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2531,947,094 - 31,996,022 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2532,528,674 - 32,582,189 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02532,142,593 - 32,196,409 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2532,145,921 - 32,195,032 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12532,098,317 - 32,152,106 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02531,947,903 - 32,001,606 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02532,113,782 - 32,166,984 (-)NCBIUU_Cfam_GSD_1.0
Cdca2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049439,940,250 - 9,997,577 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367571,195,567 - 1,248,237 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367571,195,604 - 1,249,367 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDCA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl149,518,201 - 9,566,588 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1149,517,763 - 9,571,303 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21410,682,849 - 10,731,706 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDCA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1823,582,062 - 23,631,590 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl823,582,744 - 23,632,045 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605218,535,616 - 18,584,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdca2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475820,491,118 - 20,538,653 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475820,490,902 - 20,537,171 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cdca2
1582 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:906
Count of miRNA genes:487
Interacting mature miRNAs:586
Transcripts:ENSMUST00000124045, ENSMUST00000130922, ENSMUST00000131179, ENSMUST00000132705, ENSMUST00000150006, ENSMUST00000155312, ENSMUST00000163100
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
12880432Fgf23lq3_mFGF23 serum level QTL 3 (mouse)145393744087937440Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
11039527Ccc2_mcolitis susceptibility in the Collaborative Cross 2 (mouse)145991861294138217Mouse
1300666Fembm2_mfemoral bone morphometry 2 (mouse)Not determined146239746096397680Mouse
10043888Cia51_mcollagen induced arthritis QTL 51 (mouse)Not determined146610389368785736Mouse

Markers in Region
AI586158  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381467,676,789 - 67,676,916UniSTSGRCm38
MGSCv371468,294,846 - 68,294,973UniSTSGRCm37
Celera1465,434,416 - 65,434,543UniSTS
Cytogenetic Map14D1UniSTS
Whitehead/MRC_RH14769.02UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001110162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC093020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC067009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD354922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000124045   ⟹   ENSMUSP00000116384
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,937,721 - 67,953,130 (-)Ensembl
GRCm38.p6 Ensembl1467,700,272 - 67,715,681 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130922   ⟹   ENSMUSP00000119525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,931,582 - 67,935,430 (-)Ensembl
GRCm38.p6 Ensembl1467,694,133 - 67,697,981 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131179   ⟹   ENSMUSP00000123664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,915,245 - 67,934,183 (-)Ensembl
GRCm38.p6 Ensembl1467,677,796 - 67,696,734 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132705   ⟹   ENSMUSP00000115633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,917,750 - 67,953,059 (-)Ensembl
GRCm38.p6 Ensembl1467,680,301 - 67,715,610 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150006   ⟹   ENSMUSP00000117847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,913,780 - 67,953,290 (-)Ensembl
GRCm38.p6 Ensembl1467,676,331 - 67,715,841 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155312
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,936,385 - 67,952,824 (-)Ensembl
GRCm38.p6 Ensembl1467,698,936 - 67,715,375 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163100   ⟹   ENSMUSP00000127571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1467,913,804 - 67,953,059 (-)Ensembl
GRCm38.p6 Ensembl1467,676,355 - 67,715,610 (-)Ensembl
RefSeq Acc Id: NM_001110162   ⟹   NP_001103632
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,913,803 - 67,953,059 (-)NCBI
GRCm381467,676,354 - 67,715,610 (-)NCBI
MGSCv371468,294,411 - 68,333,898 (-)RGD
Celera1465,433,981 - 65,473,487 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175384   ⟹   NP_780593
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,913,803 - 67,953,290 (-)NCBI
GRCm381467,676,354 - 67,715,841 (-)NCBI
MGSCv371468,294,411 - 68,333,898 (-)RGD
Celera1465,433,981 - 65,473,487 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006518420   ⟹   XP_006518483
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,175 (-)NCBI
GRCm381467,673,180 - 67,715,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006518423   ⟹   XP_006518486
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,945,997 (-)NCBI
GRCm381467,673,180 - 67,708,548 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244912   ⟹   XP_011243214
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,155 (-)NCBI
GRCm381467,673,180 - 67,715,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244913   ⟹   XP_011243215
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,157 (-)NCBI
GRCm381467,673,180 - 67,715,709 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011244915   ⟹   XP_011243217
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,929,813 - 67,953,155 (-)NCBI
GRCm381467,692,364 - 67,715,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247602   ⟹   XP_030103462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,175 (-)NCBI
GRCm381467,673,180 - 67,715,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247603   ⟹   XP_030103463
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,186 (-)NCBI
GRCm381467,673,180 - 67,715,737 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247604   ⟹   XP_030103464
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,953,157 (-)NCBI
GRCm381467,673,180 - 67,715,709 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247605   ⟹   XP_030103465
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391467,910,629 - 67,945,997 (-)NCBI
GRCm381467,673,180 - 67,708,548 (-)NCBI
Sequence:
RefSeq Acc Id: NP_780593   ⟸   NM_175384
- UniProtKB: Q8BSQ1 (UniProtKB/Swiss-Prot),   Q8CD75 (UniProtKB/Swiss-Prot),   Q14B71 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001103632   ⟸   NM_001110162
- UniProtKB: Q8BSQ1 (UniProtKB/Swiss-Prot),   Q8CD75 (UniProtKB/Swiss-Prot),   Q14B71 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006518483   ⟸   XM_006518420
- Peptide Label: isoform X1
- UniProtKB: Q8BSQ1 (UniProtKB/Swiss-Prot),   Q8CD75 (UniProtKB/Swiss-Prot),   Q14B71 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006518486   ⟸   XM_006518423
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011243215   ⟸   XM_011244913
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243214   ⟸   XM_011244912
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011243217   ⟸   XM_011244915
- Peptide Label: isoform X7
- UniProtKB: D3YZE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030103463   ⟸   XM_030247603
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030103464   ⟸   XM_030247604
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030103462   ⟸   XM_030247602
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030103465   ⟸   XM_030247605
- Peptide Label: isoform X6
RefSeq Acc Id: ENSMUSP00000117847   ⟸   ENSMUST00000150006
RefSeq Acc Id: ENSMUSP00000119525   ⟸   ENSMUST00000130922
RefSeq Acc Id: ENSMUSP00000116384   ⟸   ENSMUST00000124045
RefSeq Acc Id: ENSMUSP00000127571   ⟸   ENSMUST00000163100
RefSeq Acc Id: ENSMUSP00000115633   ⟸   ENSMUST00000132705
RefSeq Acc Id: ENSMUSP00000123664   ⟸   ENSMUST00000131179
Protein Domains
PP1-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q14B71-F1-model_v2 AlphaFold Q14B71 1-982 view protein structure

Promoters
RGD ID:8682818
Promoter ID:EPDNEW_M19440
Type:initiation region
Name:Cdca2_2
Description:Mus musculus cell division cycle associated 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19441  EPDNEW_M19442  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381467,715,374 - 67,715,434EPDNEW
RGD ID:8682820
Promoter ID:EPDNEW_M19441
Type:initiation region
Name:Cdca2_1
Description:Mus musculus cell division cycle associated 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19440  EPDNEW_M19442  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381467,715,600 - 67,715,660EPDNEW
RGD ID:8682822
Promoter ID:EPDNEW_M19442
Type:multiple initiation site
Name:Cdca2_3
Description:Mus musculus cell division cycle associated 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M19440  EPDNEW_M19441  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381467,715,742 - 67,715,802EPDNEW
RGD ID:6824766
Promoter ID:MM_KWN:17313
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001110162,   NM_001111028,   NM_134073,   OTTMUST00000083662,   OTTMUST00000083663,   OTTMUST00000083682,   OTTMUST00000083683,   OTTMUST00000084541,   OTTMUST00000084542,   OTTMUST00000084543,   OTTMUST00000084544,   UC007ULC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361468,332,541 - 68,334,787 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919787 AgrOrtholog
Ensembl Genes ENSMUSG00000048922 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000124045.3 UniProtKB/TrEMBL
  ENSMUST00000130922.2 UniProtKB/TrEMBL
  ENSMUST00000131179.8 UniProtKB/TrEMBL
  ENSMUST00000132705 ENTREZGENE
  ENSMUST00000132705.8 UniProtKB/TrEMBL
  ENSMUST00000150006 ENTREZGENE
  ENSMUST00000150006.9 UniProtKB/Swiss-Prot
  ENSMUST00000163100 ENTREZGENE
  ENSMUST00000163100.8 UniProtKB/Swiss-Prot
InterPro PP1-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:108912 UniProtKB/Swiss-Prot
MGD MGI:1919787 ENTREZGENE
NCBI Gene 108912 ENTREZGENE
PANTHER ANTIGEN KI-67-LIKE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21603:SF16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PP1_bind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdca2 PhenoGen
UniProt CDCA2_MOUSE UniProtKB/Swiss-Prot
  D3YZE8 ENTREZGENE, UniProtKB/TrEMBL
  D3Z5P7_MOUSE UniProtKB/TrEMBL
  F6RTJ7_MOUSE UniProtKB/TrEMBL
  F6VP65_MOUSE UniProtKB/TrEMBL
  Q14B71 ENTREZGENE
  Q8BSQ1 ENTREZGENE
  Q8CD75 ENTREZGENE
UniProt Secondary Q8BSQ1 UniProtKB/Swiss-Prot
  Q8CD75 UniProtKB/Swiss-Prot