Cox17 (cytochrome c oxidase assembly protein 17, copper chaperone) - Rat Genome Database

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Gene: Cox17 (cytochrome c oxidase assembly protein 17, copper chaperone) Mus musculus
Analyze
Symbol: Cox17
Name: cytochrome c oxidase assembly protein 17, copper chaperone
RGD ID: 1615205
MGI Page MGI
Description: Enables copper ion binding activity and enzyme activator activity. Involved in mitochondrial cytochrome c oxidase assembly. Is active in mitochondrion. Is expressed in several structures, including genitourinary system; liver; lung; small intestine; and spleen. Orthologous to human COX17 (cytochrome c oxidase copper chaperone COX17).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI037035; COX1; cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein 17; cytochrome c oxidase copper chaperone; cytochrome c oxidase subunit XVII assembly protein homolog; cytochrome c oxidase, subunit XVII assembly protein homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391638,167,332 - 38,173,125 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1638,167,353 - 38,182,659 (+)EnsemblGRCm39 Ensembl
GRCm381638,346,983 - 38,352,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,346,991 - 38,352,763 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,347,040 - 38,362,297 (+)EnsemblGRCm38mm10GRCm38
MGSCv371638,347,085 - 38,352,849 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361638,266,238 - 38,272,002 (+)NCBIMGSCv36mm8
Celera1638,757,318 - 38,763,078 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1626.77NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-dexrazoxane  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
6-propyl-2-thiouracil  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (EXP)
amitrole  (ISO)
amphetamine  (ISO)
apigenin  (ISO)
Aroclor 1254  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chloropicrin  (ISO)
chromium(6+)  (ISO)
clobetasol  (EXP)
clofibrate  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
diarsenic trioxide  (EXP)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
doxorubicin  (EXP,ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
fenthion  (EXP)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP)
gentamycin  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
heptanal  (ISO)
hexanal  (ISO)
isoniazide  (EXP)
ivermectin  (ISO)
lead diacetate  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
methimazole  (ISO)
mitomycin C  (ISO)
nimesulide  (ISO)
nonanal  (ISO)
octanal  (ISO)
oxaliplatin  (ISO)
oxybenzone  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
phenylephrine  (ISO)
phlorizin  (EXP)
pirinixic acid  (EXP)
poly(vinylpyrrolidone)  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
rac-lactic acid  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
streptozocin  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tetrachloromethane  (ISO)
tetraethylenepentamine  (ISO)
tetrathiomolybdate(2-)  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
topotecan  (ISO)
venlafaxine hydrochloride  (ISO)
vincaleukoblastine  (ISO)
zinc atom  (ISO)
zinc dichloride  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9831461   PMID:10349636   PMID:10982038   PMID:11042159   PMID:11054125   PMID:11076861   PMID:11217851   PMID:11913776   PMID:11997103   PMID:12370308   PMID:12466851  
PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18614015   PMID:18799693   PMID:21677750   PMID:21873635   PMID:27760309   PMID:29222160  
PMID:32325033   PMID:37217601   PMID:37813994  


Genomics

Comparative Map Data
Cox17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391638,167,332 - 38,173,125 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1638,167,353 - 38,182,659 (+)EnsemblGRCm39 Ensembl
GRCm381638,346,983 - 38,352,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,346,991 - 38,352,763 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,347,040 - 38,362,297 (+)EnsemblGRCm38mm10GRCm38
MGSCv371638,347,085 - 38,352,849 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361638,266,238 - 38,272,002 (+)NCBIMGSCv36mm8
Celera1638,757,318 - 38,763,078 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1626.77NCBI
COX17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383119,663,975 - 119,677,406 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3119,654,513 - 119,677,454 (-)EnsemblGRCh38hg38GRCh38
GRCh373119,382,822 - 119,396,253 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363120,871,062 - 120,878,933 (-)NCBINCBI36Build 36hg18NCBI36
Build 343120,871,061 - 120,878,933NCBI
Celera3117,796,888 - 117,804,750 (-)NCBICelera
Cytogenetic Map3q13.33NCBI
HuRef3116,764,172 - 116,772,021 (-)NCBIHuRef
CHM1_13119,351,879 - 119,359,738 (-)NCBICHM1_1
T2T-CHM13v2.03122,383,687 - 122,397,091 (-)NCBIT2T-CHM13v2.0
Cox17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81175,906,245 - 75,912,036 (-)NCBIGRCr8
mRatBN7.21162,400,733 - 62,406,507 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1171,213,255 - 71,219,029 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01163,875,474 - 63,881,248 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01162,925,841 - 62,931,615 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01164,962,663 - 64,968,437 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1164,962,666 - 64,968,437 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01167,113,608 - 67,119,382 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41164,183,573 - 64,185,985 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11164,241,161 - 64,243,574 (-)NCBI
Celera1161,901,400 - 61,907,174 (-)NCBICelera
Cytogenetic Map11q21NCBI
LOC102021151
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542719,376,482 - 19,384,270 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542719,376,482 - 19,384,270 (-)NCBIChiLan1.0ChiLan1.0
LOC100970363
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22117,635,812 - 117,651,655 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13117,640,582 - 117,656,437 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03116,786,430 - 116,796,888 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13123,696,145 - 123,709,178 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3123,701,288 - 123,709,205 (-)Ensemblpanpan1.1panPan2
COX17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13323,305,119 - 23,313,022 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3323,305,085 - 23,313,064 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3323,335,000 - 23,342,902 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03323,542,750 - 23,550,698 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3323,542,719 - 23,550,757 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13323,345,044 - 23,352,977 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03323,380,906 - 23,388,783 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03323,950,638 - 23,958,576 (-)NCBIUU_Cfam_GSD_1.0
LOC101975509
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602130,925,823 - 130,947,006 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365366,560,329 - 6,596,259 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365366,575,010 - 6,596,172 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COX17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13140,584,363 - 140,587,621 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113140,584,286 - 140,594,636 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213149,914,913 - 149,944,656 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COX17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12261,143,400 - 61,151,348 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2261,143,462 - 61,151,299 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041105,160,833 - 105,168,998 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101702679
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473128,481,594 - 28,488,528 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473128,481,591 - 28,488,395 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cox17
137 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1374
Count of miRNA genes:711
Interacting mature miRNAs:870
Transcripts:ENSMUST00000050273, ENSMUST00000119704, ENSMUST00000120495, ENSMUST00000134709, ENSMUST00000144812, ENSMUST00000152868, ENSMUST00000156026
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
1301443Mopkd2_mmodifier of polycystic kidney disease progression 2 (mouse)Not determined16464631438646414Mouse
10043978Obq35_mobesity QTL 35 (mouse)Not determined16988163143881631Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse
1300943Skts9_mskin tumor susceptibility 9 (mouse)Not determined16577525239775440Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
1300656Bgeq15_mbody growth early QTL 15 (mouse)Not determined16577525239775440Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
11251724Ewc6_methanol withdrawal and consumption 6 (mouse)16822605242226052Mouse
1300987Skull23_mskull morphology 23 (mouse)Not determined16577525239775440Mouse
1301945Skl7_mskeletal size (tail length) 7 (mouse)Not determined16577525239775440Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
15092062Egrme4_mearly growth rate, maternal effect 4 (mouse)162521866444220250Mouse
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16331786439820362Mouse
10412263Gvhd6_mgraft-versus host disease 6 (mouse)Not determined163606085745511148Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse

Markers in Region
AI037035  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381638,347,044 - 38,347,165UniSTSGRCm38
MGSCv371638,347,130 - 38,347,251UniSTSGRCm37
Celera1638,757,363 - 38,757,484UniSTS
Cytogenetic Map16B3UniSTS
Whitehead/MRC_RH16370.65UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000050273   ⟹   ENSMUSP00000054086
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,353 - 38,173,125 (+)Ensembl
GRCm38.p6 Ensembl1638,346,991 - 38,352,763 (+)Ensembl
Ensembl Acc Id: ENSMUST00000119704   ⟹   ENSMUSP00000112386
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,402 - 38,182,659 (+)Ensembl
GRCm38.p6 Ensembl1638,347,040 - 38,362,297 (+)Ensembl
Ensembl Acc Id: ENSMUST00000120495   ⟹   ENSMUSP00000113430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,384 - 38,173,106 (+)Ensembl
GRCm38.p6 Ensembl1638,347,022 - 38,352,744 (+)Ensembl
Ensembl Acc Id: ENSMUST00000134709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,169,602 - 38,173,085 (+)Ensembl
GRCm38.p6 Ensembl1638,349,240 - 38,352,723 (+)Ensembl
Ensembl Acc Id: ENSMUST00000144812
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,402 - 38,173,093 (+)Ensembl
GRCm38.p6 Ensembl1638,347,040 - 38,352,731 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152868
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,358 - 38,173,103 (+)Ensembl
GRCm38.p6 Ensembl1638,346,996 - 38,352,741 (+)Ensembl
Ensembl Acc Id: ENSMUST00000156026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,169,654 - 38,173,107 (+)Ensembl
GRCm38.p6 Ensembl1638,349,292 - 38,352,745 (+)Ensembl
Ensembl Acc Id: ENSMUST00000249256   ⟹   ENSMUSP00000159636
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,167,402 - 38,182,659 (+)Ensembl
RefSeq Acc Id: NM_001017429   ⟹   NP_001017429
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,167,361 - 38,173,125 (+)NCBI
GRCm381638,346,999 - 38,352,763 (+)NCBI
MGSCv371638,347,085 - 38,352,849 (+)RGD
Celera1638,757,318 - 38,763,078 (+)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006521750   ⟹   XP_006521813
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,167,332 - 38,170,404 (+)NCBI
GRCm381638,346,983 - 38,350,043 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001017429   ⟸   NM_001017429
- UniProtKB: P56394 (UniProtKB/Swiss-Prot),   Q54AC6 (UniProtKB/TrEMBL),   Q3UJM3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521813   ⟸   XM_006521750
- Peptide Label: isoform X1
- UniProtKB: P56394 (UniProtKB/Swiss-Prot),   Q54AC6 (UniProtKB/TrEMBL),   Q3UJM3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000112386   ⟸   ENSMUST00000119704
Ensembl Acc Id: ENSMUSP00000113430   ⟸   ENSMUST00000120495
Ensembl Acc Id: ENSMUSP00000054086   ⟸   ENSMUST00000050273
Ensembl Acc Id: ENSMUSP00000159636   ⟸   ENSMUST00000249256
Protein Domains
CHCH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P56394-F1-model_v2 AlphaFold P56394 1-63 view protein structure

Promoters
RGD ID:8686182
Promoter ID:EPDNEW_M21122
Type:initiation region
Name:Cox17_1
Description:Mus musculus cytochrome c oxidase assembly protein 17 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381638,347,031 - 38,347,091EPDNEW
RGD ID:6826933
Promoter ID:MM_KWN:20974
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000119704,   ENSMUST00000120495,   OTTMUST00000061131,   OTTMUST00000061132,   OTTMUST00000061134,   OTTMUST00000061136,   OTTMUST00000061137
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361638,347,061 - 38,349,367 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1333806 AgrOrtholog
Ensembl Genes ENSMUSG00000046516 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSG00000095464 Ensembl
Ensembl Transcript ENSMUST00000050273 ENTREZGENE
  ENSMUST00000050273.9 UniProtKB/Swiss-Prot
  ENSMUST00000120495 ENTREZGENE
  ENSMUST00000120495.2 UniProtKB/Swiss-Prot
  ENSMUST00000249256.1 UniProtKB/Swiss-Prot
Gene3D-CATH CytochromE C oxidase copper chaperone UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cys_alpha_HP_mot_SF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_c_oxidase_Cu-chaperone UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12856 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1333806 ENTREZGENE
NCBI Gene 12856 ENTREZGENE
PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR16719 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam COX17 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cox17 PhenoGen
PROSITE CHCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47072 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt COX17_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3UJM3 ENTREZGENE, UniProtKB/TrEMBL
  Q54AC6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-29 Cox17  cytochrome c oxidase assembly protein 17, copper chaperone    cytochrome c oxidase assembly protein 17  Symbol and/or name change 5135510 APPROVED
2012-11-27 Cox17  cytochrome c oxidase assembly protein 17    cytochrome c oxidase, subunit XVII assembly protein homolog (yeast)  Symbol and/or name change 5135510 APPROVED