Fubp1 (far upstream element (FUSE) binding protein 1) - Rat Genome Database

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Gene: Fubp1 (far upstream element (FUSE) binding protein 1) Mus musculus
Analyze
Symbol: Fubp1
Name: far upstream element (FUSE) binding protein 1
RGD ID: 1615144
MGI Page MGI
Description: Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including developmental cell growth; hematopoietic stem cell proliferation; and somatic stem cell division. Is active in synapse. Is expressed in several structures, including central nervous system; gonad; limb; sensory organ; and spleen. Orthologous to human FUBP1 (far upstream element binding protein 1); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 9530027K12Rik; D3Ertd330e; far upstream element (FUSE) binding protein 4; far upstream element-binding protein 1; FB; FBP; Fub; Fubp; Fubp4; FUSE-binding protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393151,916,059 - 151,942,467 (+)NCBIGRCm39mm39
GRCm39 Ensembl3151,916,059 - 151,942,463 (+)Ensembl
GRCm383152,210,422 - 152,236,830 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3152,210,422 - 152,236,826 (+)EnsemblGRCm38mm10GRCm38
MGSCv373151,873,422 - 151,899,794 (+)NCBIGRCm37mm9NCBIm37
MGSCv363152,147,907 - 152,174,212 (+)NCBImm8
Celera3158,688,293 - 158,714,689 (+)NCBICelera
Cytogenetic Map3H3NCBI
cM Map377.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
amphetamine  (ISO)
aristolochic acid  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
cisplatin  (EXP,ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper(II) chloride  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP)
geraniol  (ISO)
hexadecanoic acid  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
ketamine  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lead(2+)  (ISO)
leflunomide  (ISO)
miconazole  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
quinoline  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
succimer  (EXP)
sunitinib  (ISO)
T-2 toxin  (ISO)
tamoxifen  (EXP)
tanespimycin  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
troglitazone  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)
synapse  (EXP,IDA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal behavior  (IEA)
abnormal blood circulation  (IAGP)
abnormal brain morphology  (IAGP)
abnormal cerebral hemisphere morphology  (IAGP)
abnormal definitive hematopoiesis  (IAGP)
abnormal hematopoietic precursor cell number  (IAGP)
abnormal hematopoietic stem cell physiology  (IAGP)
abnormal lymph node morphology  (IEA)
abnormal placenta intervillous maternal lacunae morphology  (IAGP)
abnormal placenta morphology  (IAGP)
abnormal prenatal body size  (IAGP)
abnormal pulmonary alveolar sac morphology  (IAGP)
abnormal skin morphology  (IEA)
abnormal stratification in cerebral cortex  (IAGP)
absent cerebellar lobules  (IAGP)
anemia  (IAGP)
cardiac hypertrophy  (IAGP)
decreased anxiety-related response  (IEA)
decreased B cell number  (IAGP)
decreased bone marrow cell number  (IAGP)
decreased fetal size  (IAGP)
decreased megakaryocyte cell number  (IAGP)
decreased thigmotaxis  (IEA)
enlarged lymph nodes  (IEA)
hemorrhage  (IAGP)
hypoactivity  (IEA)
impaired branching involved in alveolar sac morphogenesis  (IAGP)
increased exploration in new environment  (IEA)
lymphoid hypoplasia  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
pale liver  (IAGP)
pallor  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
prenatal growth retardation  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
pulmonary hypoplasia  (IAGP)
small liver  (IAGP)
small lung  (IAGP)
spleen hypoplasia  (IAGP)
thin placenta labyrinth  (IAGP)
thymus hypoplasia  (IAGP)
References

Additional References at PubMed
PMID:8940189   PMID:9169087   PMID:9739993   PMID:10087207   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11044607   PMID:11076861   PMID:11217851   PMID:11313151  
PMID:11892998   PMID:12456657   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12819782   PMID:12904583   PMID:14610273   PMID:15033168   PMID:15489334   PMID:15582152   PMID:15782199  
PMID:16033648   PMID:16141072   PMID:16141073   PMID:16452087   PMID:16512683   PMID:16602821   PMID:16672220   PMID:18799693   PMID:18836447   PMID:20059953   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:22357600   PMID:22639370   PMID:24966911   PMID:25706271   PMID:26095368   PMID:26774856   PMID:28378742   PMID:29606613   PMID:29669786   PMID:30635626   PMID:30871777  
PMID:31077711   PMID:31138677   PMID:32325033   PMID:32433053   PMID:33005010  


Genomics

Comparative Map Data
Fubp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393151,916,059 - 151,942,467 (+)NCBIGRCm39mm39
GRCm39 Ensembl3151,916,059 - 151,942,463 (+)Ensembl
GRCm383152,210,422 - 152,236,830 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3152,210,422 - 152,236,826 (+)EnsemblGRCm38mm10GRCm38
MGSCv373151,873,422 - 151,899,794 (+)NCBIGRCm37mm9NCBIm37
MGSCv363152,147,907 - 152,174,212 (+)NCBImm8
Celera3158,688,293 - 158,714,689 (+)NCBICelera
Cytogenetic Map3H3NCBI
cM Map377.05NCBI
FUBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl177,944,055 - 77,979,110 (-)EnsemblGRCh38hg38GRCh38
GRCh38177,944,055 - 77,979,435 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37178,409,740 - 78,444,756 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36178,186,179 - 78,217,365 (-)NCBINCBI36hg18NCBI36
Build 34178,126,110 - 78,156,735NCBI
Celera176,652,669 - 76,683,855 (-)NCBI
Cytogenetic Map1p31.1NCBI
HuRef176,545,210 - 76,576,401 (-)NCBIHuRef
CHM1_1178,529,931 - 78,561,136 (-)NCBICHM1_1
Fubp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22241,159,481 - 241,186,591 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2241,159,512 - 241,186,602 (+)Ensembl
Rnor_6.02257,425,676 - 257,452,745 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2257,425,679 - 257,449,568 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02276,102,238 - 276,129,492 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42250,749,095 - 250,777,521 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2233,094,240 - 233,117,161 (+)NCBICelera
Cytogenetic Map2q45NCBI
Fubp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542315,245,610 - 15,278,628 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542315,245,645 - 15,278,628 (+)NCBIChiLan1.0ChiLan1.0
FUBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1179,244,892 - 79,280,448 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0177,162,675 - 77,198,486 (-)NCBIMhudiblu_PPA_v0panPan3
FUBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1668,923,215 - 68,963,766 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha671,580,919 - 71,621,261 (+)NCBI
ROS_Cfam_1.0669,508,282 - 69,548,642 (+)NCBI
UMICH_Zoey_3.1669,015,218 - 69,054,818 (+)NCBI
UNSW_CanFamBas_1.0668,959,769 - 69,000,118 (+)NCBI
UU_Cfam_GSD_1.0669,446,187 - 69,486,514 (+)NCBI
Fubp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505889,218,777 - 89,250,519 (-)NCBI
SpeTri2.0NW_0049365714,729,135 - 4,760,943 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6135,281,521 - 135,318,714 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16135,281,474 - 135,319,055 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26125,463,226 - 125,500,521 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FUBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12055,194,681 - 55,233,666 (+)NCBIChlSab1.1chlSab2
ChlSab1.12055,194,681 - 55,233,666 (+)NCBIChlSab1.1chlSab2
ChlSab1.12055,194,681 - 55,233,666 (+)NCBIChlSab1.1chlSab2
ChlSab1.12055,194,681 - 55,233,666 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2055,194,743 - 55,230,277 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603362,279,926 - 62,320,345 (-)NCBIVero_WHO_p1.0
Fubp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474219,279,544 - 19,313,139 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
Fubp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,232,595 - 152,232,752UniSTSGRCm38
MGSCv373151,895,559 - 151,895,716UniSTSGRCm37
Celera3158,710,454 - 158,710,611UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
RH125594  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,237,018 - 152,237,270UniSTSGRCm38
MGSCv373151,899,982 - 151,900,234UniSTSGRCm37
Celera3158,714,877 - 158,715,129UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
UniSTS:234848  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,233,960 - 152,234,192UniSTSGRCm38
MGSCv373151,896,924 - 151,897,156UniSTSGRCm37
Celera3158,711,819 - 158,712,051UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
RH126972  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,218,280 - 152,218,485UniSTSGRCm38
MGSCv373151,881,244 - 151,881,449UniSTSGRCm37
Celera3158,696,114 - 158,696,319UniSTS
Cytogenetic Map3H3UniSTS
cM Map3 UniSTS
Whitehead/MRC_RH31676.45UniSTS
Fubp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,213,723 - 152,213,994UniSTSGRCm38
MGSCv373151,876,687 - 151,876,958UniSTSGRCm37
Celera3158,691,558 - 158,691,829UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
Fubp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,213,247 - 152,213,443UniSTSGRCm38
MGSCv373151,876,211 - 151,876,407UniSTSGRCm37
Celera3158,691,082 - 158,691,278UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
A62227834FB73  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383152,234,513 - 152,235,789UniSTSGRCm38
MGSCv373151,897,477 - 151,898,753UniSTSGRCm37
Celera3158,712,372 - 158,713,648UniSTS
Cytogenetic Map3H3UniSTS
cM Map370.5UniSTS
Fubp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3H3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558868Ses9_msalmonella enteritidis susceptibility 9 (mouse)Not determined3119351571153351695Mouse
10043919Afpq8_mabdominal fat percent QTL 8 (mouse)Not determined3119351571153351695Mouse
4141935Tgq15_mtriglyceride QTL 15 (mouse)Not determined119612825153612825Mouse
4142449Tgq14_mtriglyceride QTL 14 (mouse)Not determined119612825153612825Mouse
1302151Lprm2_mlymphoproliferation modifier 2 (mouse)Not determined3120073096154073283Mouse
10412240Alpq6_malcohol preference QTL 6 (mouse)Not determined3121066317155066317Mouse
4142245Pstc1_mperiosteal circumference 1 (mouse)Not determined3126564487160039680Mouse
1301218Letohc1_mlow ethanol consumption 1 (mouse)Not determined3126647225160039680Mouse
1301347Fpli_mfasting plasma insulin (mouse)Not determined3126754753160039680Mouse
1301563Alcp3_malcohol preference locus 3 (mouse)Not determined3131031299160039680Mouse
11039523Tbbr1_mTrypanosoma brucei brucei response 1 (mouse)3131143739160039680Mouse
1301528Loco1_mlocomotor activity 1 (mouse)Not determined3133756256160039680Mouse
1301222Scc7_mcolon tumor susceptibility 7 (mouse)Not determined3143647225156658471Mouse
10045615Hrtfm8_mheart failure modifier 8 (mouse)Not determined3148745409152886674Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1989
Count of miRNA genes:589
Interacting mature miRNAs:777
Transcripts:ENSMUST00000106121, ENSMUST00000166984
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_057172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_149713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001783714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003954350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003954355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003954356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_375543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF094697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000106121   ⟹   ENSMUSP00000101727
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,158 - 151,942,463 (+)Ensembl
GRCm38.p6 Ensembl3152,210,521 - 152,236,826 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166984   ⟹   ENSMUSP00000130145
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,059 - 151,942,463 (+)Ensembl
GRCm38.p6 Ensembl3152,210,422 - 152,236,826 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196062   ⟹   ENSMUSP00000143718
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,151 - 151,925,352 (+)Ensembl
GRCm38.p6 Ensembl3152,210,514 - 152,219,715 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196429   ⟹   ENSMUSP00000143478
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,927,000 - 151,929,771 (+)Ensembl
GRCm38.p6 Ensembl3152,221,363 - 152,224,134 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196695   ⟹   ENSMUSP00000143729
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,156 - 151,938,408 (+)Ensembl
GRCm38.p6 Ensembl3152,210,519 - 152,232,771 (+)Ensembl
RefSeq Acc Id: ENSMUST00000196739   ⟹   ENSMUSP00000143101
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,135 - 151,938,408 (+)Ensembl
GRCm38.p6 Ensembl3152,210,498 - 152,232,771 (+)Ensembl
RefSeq Acc Id: ENSMUST00000197141
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,931,508 - 151,933,884 (+)Ensembl
GRCm38.p6 Ensembl3152,225,871 - 152,228,247 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198046
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,932,942 - 151,936,947 (+)Ensembl
GRCm38.p6 Ensembl3152,227,305 - 152,231,310 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198227   ⟹   ENSMUSP00000143370
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,129 - 151,930,503 (+)Ensembl
GRCm38.p6 Ensembl3152,210,492 - 152,224,866 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198405   ⟹   ENSMUSP00000142990
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,928,948 - 151,938,426 (+)Ensembl
GRCm38.p6 Ensembl3152,223,311 - 152,232,789 (+)Ensembl
RefSeq Acc Id: ENSMUST00000198539
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,930,365 - 151,941,056 (+)Ensembl
GRCm38.p6 Ensembl3152,224,728 - 152,235,419 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199127
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,927,522 - 151,928,617 (+)Ensembl
GRCm38.p6 Ensembl3152,221,885 - 152,222,980 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199199
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,923,068 - 151,924,141 (+)Ensembl
GRCm38.p6 Ensembl3152,217,431 - 152,218,504 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199202   ⟹   ENSMUSP00000143204
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,110 - 151,926,136 (+)Ensembl
GRCm38.p6 Ensembl3152,210,473 - 152,220,499 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199876   ⟹   ENSMUSP00000143618
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,156 - 151,941,405 (+)Ensembl
GRCm38.p6 Ensembl3152,210,519 - 152,235,768 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199918   ⟹   ENSMUSP00000142638
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,928,935 - 151,938,409 (+)Ensembl
GRCm38.p6 Ensembl3152,223,298 - 152,232,772 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200056   ⟹   ENSMUSP00000143686
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,928,958 - 151,941,471 (+)Ensembl
GRCm38.p6 Ensembl3152,223,321 - 152,235,834 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200207
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,933,478 - 151,938,145 (+)Ensembl
GRCm38.p6 Ensembl3152,227,841 - 152,232,508 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200452   ⟹   ENSMUSP00000143019
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,158 - 151,942,463 (+)Ensembl
GRCm38.p6 Ensembl3152,210,521 - 152,236,826 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200524   ⟹   ENSMUSP00000143354
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3151,916,119 - 151,938,409 (+)Ensembl
GRCm38.p6 Ensembl3152,210,482 - 152,232,772 (+)Ensembl
RefSeq Acc Id: NM_001355366   ⟹   NP_001342295
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355367   ⟹   NP_001342296
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355368   ⟹   NP_001342297
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355369   ⟹   NP_001342298
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355370   ⟹   NP_001342299
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355371   ⟹   NP_001342300
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355372   ⟹   NP_001342301
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355373   ⟹   NP_001342302
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355374   ⟹   NP_001342303
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: NM_057172   ⟹   NP_476513
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
MGSCv373151,873,422 - 151,899,794 (+)RGD
Celera3158,688,293 - 158,714,689 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_149713
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,059 - 151,942,467 (+)NCBI
GRCm383152,210,422 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006501660   ⟹   XP_006501723
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006501662   ⟹   XP_006501725
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006501663   ⟹   XP_006501726
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006501664   ⟹   XP_006501727
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006501672   ⟹   XP_006501735
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,081 - 151,942,467 (+)NCBI
GRCm383152,210,427 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252673   ⟹   XP_030108533
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252674   ⟹   XP_030108534
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,459 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163154   ⟹   XP_036019047
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,081 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_001783705
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783706
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783707
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,459 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783708
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783709
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783710
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,081 - 151,942,467 (+)NCBI
GRCm383152,210,427 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783711
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,087 - 151,942,467 (+)NCBI
GRCm383152,210,456 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783712
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,081 - 151,942,467 (+)NCBI
GRCm383152,210,427 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001783714
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003954350
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003954355
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003954356
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,081 - 151,942,467 (+)NCBI
GRCm383152,210,427 - 152,236,830 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004941352
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941353
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941354
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941355
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941356
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941357
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941358
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_004941359
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,087 - 151,942,467 (+)NCBI
RefSeq Acc Id: XR_375543
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393151,916,090 - 151,942,467 (+)NCBI
GRCm383152,210,453 - 152,236,830 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001342295 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342296 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342297 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342298 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342299 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342300 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342301 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342302 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342303 (Get FASTA)   NCBI Sequence Viewer  
  NP_476513 (Get FASTA)   NCBI Sequence Viewer  
  XP_006501723 (Get FASTA)   NCBI Sequence Viewer  
  XP_006501725 (Get FASTA)   NCBI Sequence Viewer  
  XP_006501726 (Get FASTA)   NCBI Sequence Viewer  
  XP_006501727 (Get FASTA)   NCBI Sequence Viewer  
  XP_006501735 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108533 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108534 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019047 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH14763 (Get FASTA)   NCBI Sequence Viewer  
  AAH23780 (Get FASTA)   NCBI Sequence Viewer  
  BAC26457 (Get FASTA)   NCBI Sequence Viewer  
  BAE23532 (Get FASTA)   NCBI Sequence Viewer  
  BAE36030 (Get FASTA)   NCBI Sequence Viewer  
  BAE39771 (Get FASTA)   NCBI Sequence Viewer  
  EDL11932 (Get FASTA)   NCBI Sequence Viewer  
  EDL11933 (Get FASTA)   NCBI Sequence Viewer  
  EDL11934 (Get FASTA)   NCBI Sequence Viewer  
  Q91WJ8 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_476513   ⟸   NM_057172
- Peptide Label: isoform 8
- UniProtKB: Q3TUE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006501735   ⟸   XM_006501672
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006501726   ⟸   XM_006501663
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006501727   ⟸   XM_006501664
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006501723   ⟸   XM_006501660
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006501725   ⟸   XM_006501662
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001342295   ⟸   NM_001355366
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001342297   ⟸   NM_001355368
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001342296   ⟸   NM_001355367
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001342298   ⟸   NM_001355369
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001342301   ⟸   NM_001355372
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001342300   ⟸   NM_001355371
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001342302   ⟸   NM_001355373
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001342299   ⟸   NM_001355370
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001342303   ⟸   NM_001355374
- Peptide Label: isoform 10
RefSeq Acc Id: XP_030108533   ⟸   XM_030252673
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030108534   ⟸   XM_030252674
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000143370   ⟸   ENSMUST00000198227
RefSeq Acc Id: ENSMUSP00000142990   ⟸   ENSMUST00000198405
RefSeq Acc Id: ENSMUSP00000130145   ⟸   ENSMUST00000166984
RefSeq Acc Id: ENSMUSP00000142638   ⟸   ENSMUST00000199918
RefSeq Acc Id: ENSMUSP00000143618   ⟸   ENSMUST00000199876
RefSeq Acc Id: ENSMUSP00000101727   ⟸   ENSMUST00000106121
RefSeq Acc Id: ENSMUSP00000143204   ⟸   ENSMUST00000199202
RefSeq Acc Id: ENSMUSP00000143718   ⟸   ENSMUST00000196062
RefSeq Acc Id: ENSMUSP00000143478   ⟸   ENSMUST00000196429
RefSeq Acc Id: ENSMUSP00000143101   ⟸   ENSMUST00000196739
RefSeq Acc Id: ENSMUSP00000143729   ⟸   ENSMUST00000196695
RefSeq Acc Id: ENSMUSP00000143354   ⟸   ENSMUST00000200524
RefSeq Acc Id: ENSMUSP00000143686   ⟸   ENSMUST00000200056
RefSeq Acc Id: ENSMUSP00000143019   ⟸   ENSMUST00000200452
RefSeq Acc Id: XP_036019047   ⟸   XM_036163154
- Peptide Label: isoform X6
Protein Domains
DUF1897   KH

Promoters
RGD ID:6833666
Promoter ID:MM_KWN:36425
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000079497,   NM_027287,   NM_057172,   OTTMUST00000081899,   OTTMUST00000081900,   OTTMUST00000081901,   UC008RSS.1,   UC008RST.1,   UC008RSU.1,   UC008RSV.1,   UC008RSW.1,   UC008RSX.1,   UC008RSY.1,   UC008RSZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363151,869,616 - 151,874,062 (-)MPROMDB
RGD ID:6882642
Promoter ID:EPDNEW_M4772
Type:initiation region
Name:Fubp1_1
Description:Mus musculus far upstream element binding protein 1 , transcriptvariant 8, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383152,210,480 - 152,210,540EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1196294 AgrOrtholog
Ensembl Genes ENSMUSG00000028034 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000101727 UniProtKB/TrEMBL
  ENSMUSP00000130145 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000142638 UniProtKB/TrEMBL
  ENSMUSP00000142990 UniProtKB/TrEMBL
  ENSMUSP00000143019 UniProtKB/TrEMBL
  ENSMUSP00000143101 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000143204 UniProtKB/TrEMBL
  ENSMUSP00000143354 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000143370 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000143478 UniProtKB/TrEMBL
  ENSMUSP00000143618 UniProtKB/TrEMBL
  ENSMUSP00000143686 UniProtKB/TrEMBL
  ENSMUSP00000143718 UniProtKB/TrEMBL
  ENSMUSP00000143729 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000106121 UniProtKB/TrEMBL
  ENSMUST00000166984 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000196062 UniProtKB/TrEMBL
  ENSMUST00000196429 UniProtKB/TrEMBL
  ENSMUST00000196695 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000196739 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000198227 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000198405 UniProtKB/TrEMBL
  ENSMUST00000199202 UniProtKB/TrEMBL
  ENSMUST00000199876 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000199918 UniProtKB/TrEMBL
  ENSMUST00000200056 UniProtKB/TrEMBL
  ENSMUST00000200452 UniProtKB/TrEMBL
  ENSMUST00000200524 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.30.1370.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FUBP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_dom_type_1_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1196294 ENTREZGENE
NCBI Gene 51886 ENTREZGENE
Pfam DUF1897 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KH_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fubp1 PhenoGen
PROSITE KH_TYPE_1 UniProtKB/Swiss-Prot
SMART SM00322 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54791 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JE55_MOUSE UniProtKB/TrEMBL
  A0A0G2JF21_MOUSE UniProtKB/TrEMBL
  A0A0G2JFK2_MOUSE UniProtKB/TrEMBL
  A0A0G2JFY5_MOUSE UniProtKB/TrEMBL
  A0A0G2JG00_MOUSE UniProtKB/TrEMBL
  A0A0G2JG96_MOUSE UniProtKB/TrEMBL
  A0A0G2JGT1_MOUSE UniProtKB/TrEMBL
  A0A0G2JGV9_MOUSE UniProtKB/TrEMBL
  A0A0G2JGW9_MOUSE UniProtKB/TrEMBL
  FUBP1_MOUSE UniProtKB/Swiss-Prot
  Q0P6B2_MOUSE UniProtKB/TrEMBL
  Q3TIS5_MOUSE UniProtKB/TrEMBL
  Q3TUE1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UUU2_MOUSE UniProtKB/TrEMBL
  Q91WJ8 ENTREZGENE
UniProt Secondary Q8C0Y8 UniProtKB/Swiss-Prot