Stk38l (serine/threonine kinase 38 like) - Rat Genome Database

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Gene: Stk38l (serine/threonine kinase 38 like) Mus musculus
Analyze
Symbol: Stk38l
Name: serine/threonine kinase 38 like
RGD ID: 1614923
MGI Page MGI
Description: Predicted to enable ATP binding activity; magnesium ion binding activity; and protein serine/threonine kinase activity. Involved in regulation of cellular component organization. Located in actin cytoskeleton and cytoplasm. Orthologous to human STK38L (serine/threonine kinase 38 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930473A22Rik; B230328I19; Nd; Ndr2; Ndr54; nuclear Dbf2-related kinase 2; serine/threonine-protein kinase 38-like
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm3555   Gm7451  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396146,626,428 - 146,680,312 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6146,626,493 - 146,680,310 (+)EnsemblGRCm39 Ensembl
GRCm386146,724,930 - 146,778,814 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6146,724,995 - 146,778,812 (+)EnsemblGRCm38mm10GRCm38
MGSCv376146,673,452 - 146,727,336 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366146,682,178 - 146,735,977 (+)NCBIMGSCv36mm8
Celera6149,764,413 - 149,820,410 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-lapachone  (ISO)
bisphenol A  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fenthion  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methoxyacetic acid  (ISO)
methylmercury chloride  (ISO)
myricetin  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nitrofen  (ISO)
paraquat  (ISO)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
selenium atom  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tetrachloromethane  (ISO)
thiram  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
actin cytoskeleton  (IDA)
cytoplasm  (IDA,ISO)
cytosol  (IEA,ISO)
glutamatergic synapse  (IEA,ISO)
membrane  (IEA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15037617   PMID:15308672   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:18799693   PMID:20064376   PMID:21677750   PMID:21873635   PMID:24719112   PMID:25601544   PMID:28378742   PMID:30135513   PMID:30568657   PMID:32554809  
PMID:34381982   PMID:35670107   PMID:36417850   PMID:36446521  


Genomics

Comparative Map Data
Stk38l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396146,626,428 - 146,680,312 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6146,626,493 - 146,680,310 (+)EnsemblGRCm39 Ensembl
GRCm386146,724,930 - 146,778,814 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6146,724,995 - 146,778,812 (+)EnsemblGRCm38mm10GRCm38
MGSCv376146,673,452 - 146,727,336 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366146,682,178 - 146,735,977 (+)NCBIMGSCv36mm8
Celera6149,764,413 - 149,820,410 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.7NCBI
STK38L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381227,244,286 - 27,325,959 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1227,243,968 - 27,325,959 (+)EnsemblGRCh38hg38GRCh38
GRCh371227,397,219 - 27,478,892 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361227,288,373 - 27,369,795 (+)NCBINCBI36Build 36hg18NCBI36
Build 341227,288,374 - 27,369,794NCBI
Celera1232,542,971 - 32,624,487 (+)NCBICelera
Cytogenetic Map12p11.23NCBI
HuRef1227,166,484 - 27,247,993 (+)NCBIHuRef
CHM1_11227,361,286 - 27,442,760 (+)NCBICHM1_1
T2T-CHM13v2.01227,116,250 - 27,197,594 (+)NCBIT2T-CHM13v2.0
Stk38l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84181,346,969 - 181,423,844 (+)NCBIGRCr8
mRatBN7.24179,616,288 - 179,693,177 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4179,634,275 - 179,690,983 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4185,919,747 - 185,976,152 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04181,704,262 - 181,760,667 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04180,324,697 - 180,381,107 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04181,027,212 - 181,089,735 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4181,027,212 - 181,089,740 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04245,213,201 - 245,245,025 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44184,316,579 - 184,392,709 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4168,150,057 - 168,185,733 (+)NCBICelera
Cytogenetic Map4q44NCBI
Stk38l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540543,317,726 - 43,390,265 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540543,364,474 - 43,389,618 (+)NCBIChiLan1.0ChiLan1.0
STK38L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21069,487,827 - 69,568,698 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11269,484,225 - 69,565,095 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01258,985,367 - 59,066,274 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11261,603,456 - 61,645,899 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1261,603,462 - 61,645,899 (-)Ensemblpanpan1.1panPan2
STK38L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12720,429,370 - 20,509,876 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2720,429,372 - 20,510,059 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2725,878,589 - 25,959,110 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02720,624,441 - 20,704,954 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2720,621,810 - 20,704,996 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12720,429,279 - 20,509,770 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02720,458,152 - 20,538,114 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02726,041,241 - 26,121,753 (+)NCBIUU_Cfam_GSD_1.0
Stk38l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494582,336,084 - 82,409,699 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936548258,106 - 332,652 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936548257,959 - 332,545 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STK38L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl546,493,675 - 46,574,697 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1546,490,981 - 46,574,716 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2550,042,869 - 50,126,545 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STK38L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11126,981,109 - 27,060,560 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1127,018,534 - 27,060,579 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660698,000,235 - 8,079,538 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stk38l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475050,591 - 134,481 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1056
Count of miRNA genes:550
Interacting mature miRNAs:634
Transcripts:ENSMUST00000001675, ENSMUST00000111644
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
1301084Bpq5_mblood pressure QTL 5 (mouse)Not determined6129330484149588044Mouse
14746990Manh61_mmandible shape 61 (mouse)6130156355149588044Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
10766452Sle23_msystematic lupus erythematosus susceptibility 23 (mouse)6128601582149588044Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
14746999Mancz6_mmandible centroid size 6 (mouse)6130156355149588044Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
1301686Trmq1_mT cell ratio modifier QTL 1 (mouse)Not determined6129330484149588044Mouse
1301620Insq8_minsulin QTL 8 (mouse)Not determined6129534979149588044Mouse
10053680Lith25_mlithogenic gene 25 (mouse)Not determined6128601582149588044Mouse
4141974Skmw14_mskeletal muscle weight 14 (mouse)Not determined6129330484149588044Mouse
15092047Wsigrme2_mweek six growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092045Wngrme2_mweek nine growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
1301027Hdlq12_mHDL QTL 12 (mouse)Not determined6128601582149588044Mouse
15092052Wsegrme2_mweek seven growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
15092053Wegrme2_mweek eight growth rate, maternal effect 2 (mouse)6140445726147201498Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
1558959Eamcd2_mexperimental autoimmune myocarditis 2 (mouse)Not determined6129953954149588044Mouse
15092060Wfogrme1_mweek four growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
15092061Wfigrme1_mweek five growth rate, maternal effect 1 (mouse)6140445726147201498Mouse
15092058Lgrme2_mlate growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
15092056Mgrme1_mmid growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
4141633Idd6.3_minsulin dependent diabetes susceptibility 6.3 (mouse)Not determined146330484146954059Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036166090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC164631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK015564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY223819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE946381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY434134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ082246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU207394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000001675   ⟹   ENSMUSP00000001675
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,626,493 - 146,680,310 (+)Ensembl
GRCm38.p6 Ensembl6146,724,995 - 146,778,812 (+)Ensembl
Ensembl Acc Id: ENSMUST00000111644   ⟹   ENSMUSP00000107271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,626,534 - 146,678,054 (+)Ensembl
GRCm38.p6 Ensembl6146,725,036 - 146,776,556 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203318   ⟹   ENSMUSP00000145209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,626,810 - 146,660,060 (+)Ensembl
GRCm38.p6 Ensembl6146,725,312 - 146,758,562 (+)Ensembl
RefSeq Acc Id: NM_001346666   ⟹   NP_001333595
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,428 - 146,680,306 (+)NCBI
GRCm386146,724,930 - 146,778,808 (+)NCBI
Sequence:
RefSeq Acc Id: NM_172734   ⟹   NP_766322
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,428 - 146,680,312 (+)NCBI
GRCm386146,724,930 - 146,778,814 (+)NCBI
MGSCv376146,673,452 - 146,727,336 (+)RGD
Celera6149,764,413 - 149,820,410 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507027   ⟹   XP_006507090
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,433 - 146,680,307 (+)NCBI
GRCm386146,724,935 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006507029   ⟹   XP_006507092
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,928 - 146,678,054 (+)NCBI
GRCm386146,725,279 - 146,778,808 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006507031   ⟹   XP_006507094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,483 - 146,680,307 (+)NCBI
GRCm386146,758,516 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006507032   ⟹   XP_006507095
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,462 - 146,680,307 (+)NCBI
GRCm386146,724,939 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321560   ⟹   XP_017177049
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,502 - 146,680,307 (+)NCBI
GRCm386146,724,940 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255357   ⟹   XP_030111217
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,766 - 146,680,072 (+)NCBI
GRCm386146,725,268 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255358   ⟹   XP_030111218
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,474 - 146,680,307 (+)NCBI
GRCm386146,724,941 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255360   ⟹   XP_030111220
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,503 - 146,680,307 (+)NCBI
GRCm386146,724,939 - 146,778,809 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036166090   ⟹   XP_036021983
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,433 - 146,676,983 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942946
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,626,433 - 146,677,504 (+)NCBI
Sequence:
RefSeq Acc Id: NP_766322   ⟸   NM_172734
- Peptide Label: isoform 1
- UniProtKB: Q8BWK4 (UniProtKB/Swiss-Prot),   Q7TSE6 (UniProtKB/Swiss-Prot),   Q6P6K6 (UniProtKB/Swiss-Prot),   B2KFR4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507090   ⟸   XM_006507027
- Peptide Label: isoform X1
- UniProtKB: Q7TSE6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507095   ⟸   XM_006507032
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006507092   ⟸   XM_006507029
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006507094   ⟸   XM_006507031
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017177049   ⟸   XM_017321560
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: NP_001333595   ⟸   NM_001346666
- Peptide Label: isoform 2
- UniProtKB: Q7TSE6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030111220   ⟸   XM_030255360
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030111218   ⟸   XM_030255358
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030111217   ⟸   XM_030255357
- Peptide Label: isoform X4
Ensembl Acc Id: ENSMUSP00000107271   ⟸   ENSMUST00000111644
Ensembl Acc Id: ENSMUSP00000145209   ⟸   ENSMUST00000203318
Ensembl Acc Id: ENSMUSP00000001675   ⟸   ENSMUST00000001675
RefSeq Acc Id: XP_036021983   ⟸   XM_036166090
- Peptide Label: isoform X2
Protein Domains
AGC-kinase C-terminal   Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TSE6-F1-model_v2 AlphaFold Q7TSE6 1-464 view protein structure

Promoters
RGD ID:6840033
Promoter ID:MM_KWN:48248
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000111644,   NM_172734_STK38L,   OTTMUST00000063111,   UC009ESI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366146,673,231 - 146,673,747 (+)MPROMDB
RGD ID:6891532
Promoter ID:EPDNEW_M9216
Type:initiation region
Name:Stk38l_1
Description:Mus musculus serine/threonine kinase 38 like , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386146,725,011 - 146,725,071EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922250 AgrOrtholog
Ensembl Genes ENSMUSG00000001630 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000001675 ENTREZGENE
  ENSMUST00000001675.14 UniProtKB/Swiss-Prot
  ENSMUST00000111644 ENTREZGENE
  ENSMUST00000111644.2 UniProtKB/Swiss-Prot
  ENSMUST00000203318.2 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro AGC-kinase_C UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  Pkinase_C UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot
  Ser_Thr_kinase_AGC UniProtKB/Swiss-Prot
KEGG Report mmu:232533 UniProtKB/Swiss-Prot
MGD MGI:1922250 ENTREZGENE
NCBI Gene Stk38l ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE UniProtKB/Swiss-Prot
  SERINE/THREONINE-PROTEIN KINASE 38-LIKE UniProtKB/Swiss-Prot
Pfam Pkinase UniProtKB/Swiss-Prot
  Pkinase_C UniProtKB/Swiss-Prot
PhenoGen Stk38l PhenoGen
PROSITE AGC_KINASE_CTER UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot
SMART S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt A0A0N4SVR1_MOUSE UniProtKB/TrEMBL
  B2KFR4 ENTREZGENE
  Q6P6K6 ENTREZGENE
  Q7TSE6 ENTREZGENE
  Q8BWK4 ENTREZGENE
  ST38L_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary B2KFR4 UniProtKB/Swiss-Prot
  Q6P6K6 UniProtKB/Swiss-Prot
  Q8BWK4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Stk38l  serine/threonine kinase 38 like  4930473A22Rik  RIKEN cDNA 4930473A22 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 4930473A22Rik  RIKEN cDNA 4930473A22 gene  Stk38l  serine/threonine kinase 38 like  Symbol and/or name change 5135510 APPROVED