Zfp651 (zinc finger protein 651) - Rat Genome Database
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Gene: Zfp651 (zinc finger protein 651) Mus musculus
Analyze
Symbol: Zfp651
Name: zinc finger protein 651
RGD ID: 1614837
MGI Page MGI
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZBTB47 (zinc finger and BTB domain containing 47); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4732420M22Rik; BC030045; R74626; zinc finger and BTB domain-containing protein 47
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399121,588,210 - 121,600,808 (+)NCBIGRCm39mm39
GRCm389121,759,319 - 121,771,742 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9121,759,330 - 121,771,742 (+)EnsemblGRCm38mm10GRCm38
MGSCv379121,669,151 - 121,680,860 (+)NCBIGRCm37mm9NCBIm37
MGSCv369121,608,737 - 121,620,440 (+)NCBImm8
Celera9122,233,367 - 122,244,942 (+)NCBICelera
Cytogenetic Map9F4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA)

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750  
PMID:21873635  


Genomics

Comparative Map Data
Zfp651
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399121,588,210 - 121,600,808 (+)NCBIGRCm39mm39
GRCm389121,759,319 - 121,771,742 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9121,759,330 - 121,771,742 (+)EnsemblGRCm38mm10GRCm38
MGSCv379121,669,151 - 121,680,860 (+)NCBIGRCm37mm9NCBIm37
MGSCv369121,608,737 - 121,620,440 (+)NCBImm8
Celera9122,233,367 - 122,244,942 (+)NCBICelera
Cytogenetic Map9F4NCBI
ZBTB47
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl342,653,697 - 42,667,580 (+)EnsemblGRCh38hg38GRCh38
GRCh38342,653,697 - 42,667,580 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37342,695,176 - 42,709,072 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36342,675,878 - 42,684,076 (+)NCBINCBI36hg18NCBI36
Build 34342,675,877 - 42,684,076NCBI
Celera342,635,572 - 42,649,469 (+)NCBI
Cytogenetic Map3p22.1NCBI
HuRef342,740,811 - 42,754,708 (+)NCBIHuRef
CHM1_1342,646,354 - 42,660,250 (+)NCBICHM1_1
Zbtb47
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08130,397,984 - 130,409,437 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8130,401,470 - 130,406,991 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08129,577,836 - 129,589,272 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48127,169,356 - 127,177,333 (-)NCBIRGSC3.4rn4RGSC3.4
Celera8120,557,477 - 120,568,659 (+)NCBICelera
Cytogenetic Map8q32NCBI
Zbtb47
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542028,137,041 - 28,141,686 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542028,134,811 - 28,141,686 (-)NCBIChiLan1.0ChiLan1.0
ZBTB47
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1343,629,405 - 43,639,232 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl343,629,405 - 43,639,232 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0342,560,887 - 42,573,752 (+)NCBIMhudiblu_PPA_v0panPan3
ZBTB47
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2311,785,371 - 11,796,348 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12311,783,718 - 11,799,394 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Zbtb47
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366952,441,355 - 2,452,789 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZBTB47
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1326,182,184 - 26,198,115 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11326,181,268 - 26,195,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21328,849,766 - 28,859,888 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZBTB47
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1224,109,856 - 4,123,692 (+)NCBI
ChlSab1.1 Ensembl224,110,354 - 4,123,825 (+)Ensembl
Zbtb47
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473077,027,641 - 77,034,900 (-)NCBI

Position Markers
R74626  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,769,146 - 121,769,341UniSTSGRCm38
MGSCv379121,678,264 - 121,678,459UniSTSGRCm37
Celera9122,242,348 - 122,242,543UniSTS
Cytogenetic Map9F4UniSTS
Whitehead/MRC_RH91221.65UniSTS
RH125081  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,769,237 - 121,769,360UniSTSGRCm38
MGSCv379121,678,355 - 121,678,478UniSTSGRCm37
Celera9122,242,439 - 122,242,562UniSTS
Cytogenetic Map9F4UniSTS
UniSTS:236290  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389121,769,765 - 121,769,983UniSTSGRCm38
MGSCv379121,678,883 - 121,679,101UniSTSGRCm37
Celera9122,242,967 - 122,243,185UniSTS
Cytogenetic Map9F4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1634
Count of miRNA genes:709
Interacting mature miRNAs:888
Transcripts:ENSMUST00000093772
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000093772   ⟹   ENSMUSP00000091286
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,760,033 - 121,771,742 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213743
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,767,082 - 121,769,054 (+)Ensembl
RefSeq Acc Id: ENSMUST00000214732   ⟹   ENSMUSP00000150384
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,759,330 - 121,767,556 (+)Ensembl
RefSeq Acc Id: ENSMUST00000215081
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9121,764,017 - 121,766,074 (+)Ensembl
RefSeq Acc Id: NM_001166644   ⟹   NP_001160116
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,589,099 - 121,600,808 (+)NCBI
GRCm389121,760,033 - 121,771,742 (+)NCBI
MGSCv379121,669,151 - 121,680,860 (+)RGD
Celera9122,233,367 - 122,244,942 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006512145   ⟹   XP_006512208
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,588,210 - 121,599,320 (+)NCBI
GRCm389121,759,319 - 121,770,254 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006512146   ⟹   XP_006512209
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,589,059 - 121,599,320 (+)NCBI
GRCm389121,760,038 - 121,770,254 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778915
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,589,059 - 121,599,320 (+)NCBI
GRCm389121,760,038 - 121,770,254 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935442
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399121,589,059 - 121,599,320 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001160116 (Get FASTA)   NCBI Sequence Viewer  
  XP_006512208 (Get FASTA)   NCBI Sequence Viewer  
  XP_006512209 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001160116   ⟸   NM_001166644
- UniProtKB: E9PZ11 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006512208   ⟸   XM_006512145
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006512209   ⟸   XM_006512146
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000091286   ⟸   ENSMUST00000093772
RefSeq Acc Id: ENSMUSP00000150384   ⟸   ENSMUST00000214732
Protein Domains
BTB   C2H2-type

Promoters
RGD ID:8671264
Promoter ID:EPDNEW_M13663
Type:initiation region
Name:Zfp651_1
Description:Mus musculus zinc finger protein 651 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389121,760,033 - 121,760,093EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2670992 AgrOrtholog
Ensembl Genes ENSMUSG00000013419 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000091286 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000150384 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000093772 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000214732 UniProtKB/TrEMBL
InterPro BTB/POZ-like UniProtKB/TrEMBL
  BTB/POZ_fold UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report mmu:270210 UniProtKB/TrEMBL
MGD MGI:2670992 ENTREZGENE
NCBI Gene 270210 ENTREZGENE
Pfam BTB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PhenoGen Zfp651 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART BTB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP BTB/POZ_fold UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniGene Mm.473702 ENTREZGENE
UniProt A0A1L1STM6_MOUSE UniProtKB/TrEMBL
  E9PZ11 ENTREZGENE, UniProtKB/TrEMBL