Vmn2r105 (vomeronasal 2, receptor 105) - Rat Genome Database

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Gene: Vmn2r105 (vomeronasal 2, receptor 105) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r105
Name: vomeronasal 2, receptor 105
RGD ID: 1614624
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor activity.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EG627743; vomeronasal receptor Vmn2r105
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391720,428,492 - 20,455,134 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)EnsemblGRCm39 Ensembl
GRCm381720,208,230 - 20,234,872 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)EnsemblGRCm38mm10GRCm38
MGSCv371720,345,194 - 20,371,836 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361719,912,501 - 19,964,260 (-)NCBIMGSCv36mm8
Celera1721,236,451 - 21,263,083 (-)NCBICelera
Cytogenetic Map17A3.2NCBI
cM Map1711.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:17382427   PMID:21873635  


Genomics

Variants

.
Variants in Vmn2r105
1217 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:25
Count of miRNA genes:22
Interacting mature miRNAs:23
Transcripts:ENSMUST00000167382
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17787584329487423Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142507Obrq13_mobesity resistance QTL 13 (mouse)Not determined1219832925076769Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
1558807Ceat1_mchronic experimental autoimmune thyroiditis 1 (mouse)Not determined171263668226401133Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302038Radpf1_mradiation pulmonary fibrosis 1 (mouse)Not determined171683545533819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse

Markers in Region
D17Jcs3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381720,214,346 - 20,214,585UniSTSGRCm38
MGSCv371720,351,310 - 20,351,549UniSTSGRCm37
Celera1721,242,577 - 21,242,816UniSTS
Cytogenetic Map17A3.2UniSTS
cM Map17 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001369232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000167382   ⟹   ENSMUSP00000129762
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,428,492 - 20,455,134 (-)Ensembl
GRCm38.p6 Ensembl1720,208,230 - 20,234,872 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232768   ⟹   ENSMUSP00000156604
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232803   ⟹   ENSMUSP00000156599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232877   ⟹   ENSMUSP00000156813
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,599 - 20,455,309 (-)Ensembl
GRCm38.p6 Ensembl1720,202,337 - 20,235,047 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233461   ⟹   ENSMUSP00000156971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233468   ⟹   ENSMUSP00000156685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233786   ⟹   ENSMUSP00000156857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233950   ⟹   ENSMUSP00000156902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1720,422,583 - 20,455,314 (-)Ensembl
GRCm38.p6 Ensembl1720,202,321 - 20,235,052 (-)Ensembl
RefSeq Acc Id: NM_001369232   ⟹   NP_001356161
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391720,428,492 - 20,455,134 (-)NCBI
GRCm381720,208,230 - 20,234,872 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001356161   ⟸   NM_001369232
- UniProtKB: A0A3B2W8C2 (UniProtKB/TrEMBL),   E9Q3A5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000156971   ⟸   ENSMUST00000233461
RefSeq Acc Id: ENSMUSP00000156685   ⟸   ENSMUST00000233468
RefSeq Acc Id: ENSMUSP00000156857   ⟸   ENSMUST00000233786
RefSeq Acc Id: ENSMUSP00000156902   ⟸   ENSMUST00000233950
RefSeq Acc Id: ENSMUSP00000156813   ⟸   ENSMUST00000232877
RefSeq Acc Id: ENSMUSP00000156599   ⟸   ENSMUST00000232803
RefSeq Acc Id: ENSMUSP00000156604   ⟸   ENSMUST00000232768
RefSeq Acc Id: ENSMUSP00000129762   ⟸   ENSMUST00000167382
Protein Domains
G-protein coupled receptors family 3 profile   GPCR family 3 nine cysteines   Receptor ligand binding region

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q3A5-F1-model_v2 AlphaFold E9Q3A5 1-860 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3646973 AgrOrtholog
Ensembl Genes ENSMUSG00000091670 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000167382.2 UniProtKB/TrEMBL
  ENSMUST00000232768.3 UniProtKB/TrEMBL
  ENSMUST00000232803.3 UniProtKB/TrEMBL
  ENSMUST00000232877.3 UniProtKB/TrEMBL
  ENSMUST00000233461 ENTREZGENE
  ENSMUST00000233461.3 UniProtKB/TrEMBL
  ENSMUST00000233468.3 UniProtKB/TrEMBL
  ENSMUST00000233786.3 UniProtKB/TrEMBL
  ENSMUST00000233950.3 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  GPCR_3 UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/TrEMBL
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/TrEMBL
  GPCR_3_vmron_rcpt_2 UniProtKB/TrEMBL
  Growth_fac_rcpt_N_dom UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
MGD MGI:3646973 ENTREZGENE
NCBI Gene 627743 ENTREZGENE
PANTHER PTHR24061 UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 105-RELATED UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/TrEMBL
  ANF_receptor UniProtKB/TrEMBL
  NCD3G UniProtKB/TrEMBL
PhenoGen Vmn2r105 PhenoGen
PRINTS GPCRMGR UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_4 UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/TrEMBL
  SSF57184 UniProtKB/TrEMBL
UniProt A0A3B2W7M0_MOUSE UniProtKB/TrEMBL
  A0A3B2W879_MOUSE UniProtKB/TrEMBL
  A0A3B2W8C2 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B2WCN5_MOUSE UniProtKB/TrEMBL
  A0A3B2WCT8_MOUSE UniProtKB/TrEMBL
  A0A3B2WD24_MOUSE UniProtKB/TrEMBL
  A0A3B2WD54_MOUSE UniProtKB/TrEMBL
  E9Q3A5 ENTREZGENE, UniProtKB/TrEMBL