Advanced Search (OLGA)

Gene: Kcne5 (potassium voltage-gated channel subfamily E regulatory subunit 5) Mus musculus

Analyze

Symbol:

Kcne5

Name:

potassium voltage-gated channel subfamily E regulatory subunit 5

RGD ID:

1614379

MGI Page

MGI

Description:

Predicted to enable potassium channel regulator activity and transmembrane transporter binding activity. Predicted to contribute to delayed rectifier potassium channel activity and voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization. Predicted to be involved in several processes, including cardiac muscle cell action potential involved in contraction; regulation of cardiac muscle cell membrane repolarization; and regulation of potassium ion transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of voltage-gated potassium channel complex. Is expressed in several structures, including embryo mesenchyme; ganglia; gonad; skeletal musculature; and ventricular layer. Orthologous to human KCNE5 (potassium voltage-gated channel subfamily E regulatory subunit 5).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1500015C14Rik; Kcne; Kcne1l; Mink; minK-like protein; potassium voltage-gated channel subfamily E member 1-like protein; potassium voltage-gated channel subfamily E regulatory beta subunit 5; potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	141,087,749 - 141,089,194 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	141,087,748 - 141,089,290 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	142,304,753 - 142,306,198 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	142,304,752 - 142,306,294 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	138,739,296 - 138,740,741 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	137,551,121 - 137,552,566 (-)	NCBI		MGSCv36	mm8
Celera	X	126,300,230 - 126,301,675 (-)	NCBI		Celera
Cytogenetic Map	X	F2	NCBI
cM Map	X	63.11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

autosomal hemophilia A (ISO)

Brugada syndrome (ISO)

Charcot-Marie-Tooth disease type X (ISO)

factor VIII deficiency (ISO)

Sudden Unexpected Nocturnal Death Syndrome (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

acrylamide (ISO)

amiodarone (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

carbamazepine (ISO)

CGP 52608 (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

genistein (EXP)

glycidol (ISO)

GW 4064 (EXP)

resveratrol (ISO)

silicon dioxide (ISO)

titanium dioxide (EXP)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

atrial cardiac muscle cell action potential (IEA,ISO)

cardiac muscle contraction (ISO)

membrane repolarization during action potential (IBA)

negative regulation of delayed rectifier potassium channel activity (IBA)

negative regulation of potassium ion export across plasma membrane (IEA,ISO)

negative regulation of potassium ion transmembrane transport (ISO)

positive regulation of potassium ion transmembrane transport (IEA,ISO)

potassium ion export across plasma membrane (IBA)

potassium ion transmembrane transport (IEA)

regulation of atrial cardiac muscle cell membrane repolarization (IEA,ISO)

regulation of cation channel activity (ISO)

regulation of heart contraction (ISO)

regulation of heart rate by cardiac conduction (IBA,IEA,ISO)

regulation of membrane repolarization (ISO)

regulation of potassium ion transmembrane transport (ISO)

regulation of ventricular cardiac muscle cell membrane repolarization (IBA,IEA,ISO)

ventricular cardiac muscle cell action potential (IBA,IEA,ISO)

Cellular Component

plasma membrane (ISO)

voltage-gated potassium channel complex (IBA,IEA,ISO)

Molecular Function

delayed rectifier potassium channel activity (IBA)

potassium channel regulator activity (IBA,IEA,ISO)

protein binding (ISO)

transmembrane transporter binding (IBA,IEA,ISO)

voltage-gated potassium channel activity (IEA,ISO)

voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization (ISO)

voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (IBA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cardiovascular system physiology (IAGP)

abnormal myocardial fiber currents (IAGP)

ventricular premature beat (IAGP)

ventricular tachycardia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:10493825	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:12670483	PMID:15489334	PMID:16141072	PMID:16141073	PMID:16602821
PMID:16844427	PMID:17785180	PMID:21267068	PMID:21873635	PMID:30289750	PMID:34368133	PMID:37196079

Genomics

Comparative Map Data

Kcne5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	141,087,749 - 141,089,194 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	141,087,748 - 141,089,290 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	142,304,753 - 142,306,198 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	142,304,752 - 142,306,294 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	138,739,296 - 138,740,741 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	137,551,121 - 137,552,566 (-)	NCBI		MGSCv36	mm8
Celera	X	126,300,230 - 126,301,675 (-)	NCBI		Celera
Cytogenetic Map	X	F2	NCBI
cM Map	X	63.11	NCBI

KCNE5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	109,623,700 - 109,625,172 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	109,623,700 - 109,625,172 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	108,866,929 - 108,868,401 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	108,753,585 - 108,755,049 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	108,673,073 - 108,674,538	NCBI
Celera	X	109,346,567 - 109,348,031 (-)	NCBI		Celera
Cytogenetic Map	X	q23	NCBI
HuRef	X	98,489,930 - 98,491,217 (-)	NCBI		HuRef
CHM1_1	X	108,778,194 - 108,779,658 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	108,071,490 - 108,072,962 (-)	NCBI		T2T-CHM13v2.0

Kcne5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	110,727,234 - 110,727,849 (-)	NCBI		GRCr8
mRatBN7.2	X	105,930,398 - 105,931,013 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	105,930,398 - 105,931,013 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	108,068,193 - 108,068,808 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	111,567,368 - 111,567,983 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	109,133,664 - 109,134,279 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	113,583,844 - 113,584,459 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	113,583,844 - 113,584,459 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	112,033,789 - 112,034,404 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	36,243,961 - 36,244,576 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	105,344,535 - 105,345,150 (-)	NCBI		Celera
Cytogenetic Map	X	q33	NCBI

Kcne5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955490	6,242,197 - 6,243,627 (+)	NCBI	ChiLan1.0	ChiLan1.0

KCNE5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	109,114,032 - 109,115,971 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	109,117,636 - 109,119,108 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	98,731,109 - 98,732,575 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	109,201,428 - 109,202,890 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	109,202,320 - 109,202,748 (-)	Ensembl	panpan1.1		panPan2

KCNE5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	82,844,188 - 82,845,641 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	82,845,064 - 82,846,083 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	68,922,748 - 68,924,125 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	84,494,588 - 84,496,047 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	84,495,468 - 84,495,884 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	81,971,600 - 81,973,057 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	83,665,901 - 83,667,358 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	83,494,598 - 83,495,963 (-)	NCBI		UU_Cfam_GSD_1.0

Kcne5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	82,099,472 - 82,100,922 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936499	5,557,202 - 5,557,627 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936499	5,557,076 - 5,558,467 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KCNE5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	89,741,190 - 89,742,672 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	89,741,187 - 89,742,732 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	105,356,199 - 105,357,717 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KCNE5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	97,477,667 - 97,485,376 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	97,478,562 - 97,478,987 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	22,673,085 - 22,676,609 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kcne5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624803	6,385,405 - 6,385,876 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	630
Count of miRNA genes:	411
Interacting mature miRNAs:	481
Transcripts:	ENSMUST00000134825
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
13208552	Wght12_m	weight 12 (mouse)					X	94043606	149782996	Mouse
1558900	Bw3_m	body weight QTL 3 (mouse)			Not determined		X	133540040	165298595	Mouse
13208556	Lgth14_m	body length 14 (mouse)					X	94043606	149782996	Mouse
13824980	Ferq1_m	genetic fertility QTL 1 (mouse)					X	54045360	148782996	Mouse
25314309	Syncl5_m	synaptonemal complex length 5 (mouse)					X	121909697	152582996	Mouse
13824981	Svwq2_m	seminal vesicle weight QTL 2 (mouse)					X	128900749	153782996	Mouse
1301209	Cia19_m	collagen induced arthritis 19 (mouse)			Not determined		X	120993165	160213038	Mouse
10412164	Cmv2_m	cytomegalovirus resistance 2 (mouse)			Not determined		X	125685149	159685269	Mouse
1357823	Spha3_m	sperm head anomaly 3 (mouse)			Not determined		X	102055848	162758941	Mouse
1357433	Dbts2_m	diabetes 2 (mouse)			Not determined		X	7226295	150107038	Mouse
1301276	Tswt_m	testis weight (mouse)			Not determined		X	138376411	150789338	Mouse

Markers in Region

Kcne1l

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	X	142,305,573 - 142,305,989	UniSTS	GRCm38
MGSCv37	X	138,740,116 - 138,740,532	UniSTS	GRCm37
Celera	X	126,301,050 - 126,301,466	UniSTS
Cytogenetic Map	X	F1	UniSTS
cM Map	X		UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_021487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ131398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK005246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK014537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL731672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC028942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000134825 ⟹ ENSMUSP00000127773

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	141,087,748 - 141,089,290 (-)	Ensembl
GRCm38.p6 Ensembl	X	142,304,752 - 142,306,294 (-)	Ensembl

RefSeq Acc Id:

NM_021487 ⟹ NP_067462

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	141,087,749 - 141,089,194 (-)	NCBI
GRCm38	X	142,304,753 - 142,306,198 (-)	ENTREZGENE
MGSCv37	X	138,739,296 - 138,740,741 (-)	RGD
Celera	X	126,300,230 - 126,301,675 (-)	RGD
cM Map	X		ENTREZGENE

Sequence:

show sequence

GCCCGGCCTGAGGCCCCAGTCACTGAGCGCCTGCCGGGGAGCTGGGTGCCACCTCGCTGTCGAA
GTCTCTGCACCCTGCCTGCTCTGCTTGCTCCCCTTGCTCGCTTGCTTCCCCTTGTCCAGGGGGA
AAGGTCAACTGCGTCCTGGAGCCTCCGTGCCACTCTCCAACAGCTATGAACTGCAGCGAGAGCC
AACGGCTGCAAACCCTCTTGAACCGCTTGCTGCTGGAGCTGCACCATCGTGGCAACGCCAGCGG
CCTGGGCATCGGAACCGGCCCGAGCATGGGCATGGGGGTCGTCCCTGACCCTTTCGTGGGCCGC
GAGGCGACCAGCGCCAAGGGTAACGACGCTTATCTCTACATCCTACTCATCATGATCTTCTATG
CCTGCCTAGCCGGAGGCCTCATCCTGGCCTACACCCGCTCCCGCAAGCTCGTCGAGGCCAAGGA
TGAGCCACCCCTGGCCTGTGTTGCTGAGCAGGAATGGGTCCCCGCTGCCATCGCATCTGCCGAC
CCGGAGAATGGCCAGGGCTTGCTGGCTGAGGGCGGCCACCAGCTCGCAGCAGGGGCGCTGCCTG
CGCTGGCTCAGGGCGCTGAGAGGGTCTAGATCCGCTGTCCTCCTCATTTTGCTTATCCCTGGGC
CTGGCTCCCGCGCTTTTACTGCCGTTCCAGAGCTCGCTTTACCCGAGGCCCAGAAGATGATGAG
AGGTCAGAACCCTTCAAGGCAAGGCCCTGGAAGAAGAAGCAGCGCCTTACTCACACCCGACCAC
CTTCTCTCTCCCCTCCCTTCCATGCCGGCAGGCACCCCTACCCCGCATATCCAACCGAATTAAA
CTGCCTCTGCTTTCTTGTCTTCAGCCAGCCCCAACACCATGCTCTAGCCTTCTGGGAACAGAAT
CCAGCACGTCCAACACTTGGCATTGAATCGAAGCAACGAAGTCTAGCAGAACTCTGGGGCCGTT
TAACTGGCAGCTGCTCCAGGGGCTGCCAAGGACTGCTCAGTCTGCACAGCTAATGGGGTTAGCC
ATCACTGCCAGGCCCGCTGCAGCAGCTCAAGCTTTCTGTTGCCTTGGGGACAGAGACAAAGAGC
ACGAAGAGACCTCAGACATCTTTTCCTTCAGCGGGCTATTAGGGAGACACTATTGTGGCATAGA
ATGGACTGAAGGGGAGGGAAGGTTCAATGGGAAAGGAAGATCTATGGTCCCAGGGGTATGGTGT
TCTTGTTTTCCTGTCCCCCTAATTGCCATCCCAATGGTCTGAGTATTAGTGCTTTGGACATCTG
GCTTGGATAATCATTACTAGTTGCTTAGCCTTAATAATCCCAAATGCATCTCTTATATTGGTTC
AGTTATTACTGCAATGTATGTATGCTTCATTCAGGGCCAGTCATCCCTAGCTCTGTAACCTTGG
GGAATCTTACAGGCAGGTAATAAAGTTTGTTAATCAGT

hide sequence

Protein Sequences


Protein RefSeqs	NP_067462	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH28942	(Get FASTA)	NCBI Sequence Viewer
	BAC25441	(Get FASTA)	NCBI Sequence Viewer
	CAB58362	(Get FASTA)	NCBI Sequence Viewer
	EDL14751	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000127773
	ENSMUSP00000127773.2
GenBank Protein	Q9QZ26	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_067462 ⟸ NM_021487
- UniProtKB:	Q9QZ26 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MNCSESQRLQTLLNRLLLELHHRGNASGLGIGTGPSMGMGVVPDPFVGREATSAKGNDAYLYIL LIMIFYACLAGGLILAYTRSRKLVEAKDEPPLACVAEQEWVPAAIASADPENGQGLLAEGGHQL AAGALPALAQGAERV hide sequence

Ensembl Acc Id:

ENSMUSP00000127773 ⟸ ENSMUST00000134825

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9QZ26-F1-model_v2	AlphaFold	Q9QZ26	1-143	view protein structure

Promoters

RGD ID:

6845874

Promoter ID:

MM_KWN:62118

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Spleen

Transcripts:

NM_021487

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	X	138,740,326 - 138,740,826 (-)	MPROMDB

RGD ID:

13681542

Promoter ID:

EPDNEW_M24920

Type:

multiple initiation site

Name:

Kcne1l_1

Description:

Mus musculus potassium voltage-gated channel, Isk-related family,member 1-like, pseudogene , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	X	142,306,186 - 142,306,246	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1913490	AgrOrtholog
Ensembl Genes	ENSMUSG00000090122	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000134825	ENTREZGENE
	ENSMUST00000134825.3	UniProtKB/Swiss-Prot
InterPro	K_chnl_KCNE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:66240	UniProtKB/Swiss-Prot
MGD	MGI:1913490	ENTREZGENE
NCBI Gene	66240	ENTREZGENE
PANTHER	POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY E MEMBER 1, 3	UniProtKB/TrEMBL
	POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY E REGULATORY BETA SUBUNIT 5	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR15282	UniProtKB/Swiss-Prot
Pfam	ISK_Channel	UniProtKB/Swiss-Prot
PhenoGen	Kcne5	PhenoGen
UniProt	KCNE5_MOUSE	UniProtKB/Swiss-Prot
	Q8C1K1_MOUSE	UniProtKB/TrEMBL
	Q9QZ26	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-06-05	Kcne5	potassium voltage-gated channel subfamily E regulatory subunit 5	Kcne1l	potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene	Symbol and/or name updated	27372883	PROVISIONAL
2011-07-27	Kcne1l	potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene	Kcne1l	potassium voltage-gated channel, Isk-related family, member 1-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar

Mammalian Phenotype