Kcng1 (potassium voltage-gated channel, subfamily G, member 1) - Rat Genome Database
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Gene: Kcng1 (potassium voltage-gated channel, subfamily G, member 1) Mus musculus
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Symbol: Kcng1
Name: potassium voltage-gated channel, subfamily G, member 1
RGD ID: 1614136
Description: Predicted to have delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of delayed rectifier potassium channel activity. Predicted to localize to voltage-gated potassium channel complex. Orthologous to human KCNG1 (potassium voltage-gated channel modifier subfamily G member 1); INTERACTS WITH 4,4'-sulfonyldiphenol; benzo[b]fluoranthene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AW536275; expressed sequence AW536275; orthologue of H. sapiens potassium voltage-gated channel, subfamily G, member 1 (KCNG1); potassium voltage-gated channel subfamily G member 1; RP23-391M18.5; voltage-gated potassium channel subunit Kv6.1
Orthologs:
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392168,102,037 - 168,123,453 (-)NCBI
GRCm382168,260,117 - 168,281,533 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2168,260,117 - 168,281,736 (-)EnsemblGRCm38mm10GRCm38
MGSCv372168,087,198 - 168,094,831 (-)NCBIGRCm37mm9NCBIm37
MGSCv362167,952,903 - 167,960,536 (-)NCBImm8
Celera2174,205,805 - 174,213,584 (-)NCBICelera
Cytogenetic Map2H3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10922068   PMID:12477932   PMID:18799693   PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Kcng1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392168,102,037 - 168,123,453 (-)NCBI
GRCm382168,260,117 - 168,281,533 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2168,260,117 - 168,281,736 (-)EnsemblGRCm38mm10GRCm38
MGSCv372168,087,198 - 168,094,831 (-)NCBIGRCm37mm9NCBIm37
MGSCv362167,952,903 - 167,960,536 (-)NCBImm8
Celera2174,205,805 - 174,213,584 (-)NCBICelera
Cytogenetic Map2H3NCBI
KCNG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2051,003,656 - 51,023,107 (-)EnsemblGRCh38hg38GRCh38
GRCh382051,003,656 - 51,023,176 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372049,620,193 - 49,639,675 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362049,053,600 - 49,073,082 (-)NCBINCBI36hg18NCBI36
Celera2046,324,438 - 46,343,920 (-)NCBI
Cytogenetic Map20q13.13NCBI
HuRef2046,368,737 - 46,388,218 (-)NCBIHuRef
CHM1_12049,525,802 - 49,545,284 (-)NCBICHM1_1
Kcng1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03165,020,230 - 165,040,966 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3165,020,230 - 165,039,707 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03171,159,893 - 171,179,352 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43159,427,774 - 159,447,234 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13159,333,660 - 159,352,565 (-)NCBI
Celera3155,546,226 - 155,565,215 (-)NCBICelera
Cytogenetic Map3q42NCBI
Kcng1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554457,408,881 - 7,427,602 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554457,411,460 - 7,427,602 (+)NCBIChiLan1.0ChiLan1.0
KCNG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12048,477,445 - 48,497,833 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2048,477,445 - 48,497,108 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02047,351,133 - 47,370,638 (-)NCBIMhudiblu_PPA_v0panPan3
KCNG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2437,320,145 - 37,326,968 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12437,320,197 - 37,327,514 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Kcng1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365143,781,991 - 3,798,451 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1752,422,280 - 52,444,656 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11752,425,190 - 52,444,832 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21758,865,170 - 58,884,892 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNG1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl212,949,212 - 12,968,993 (+)Ensembl
ChlSab1.1212,949,103 - 12,968,590 (+)NCBI
Kcng1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247904,737,416 - 4,754,126 (+)NCBI

Position Markers
UniSTS:224770  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382168,270,512 - 168,270,652UniSTSGRCm38
MGSCv372168,096,012 - 168,096,152UniSTSGRCm37
Celera2174,214,765 - 174,214,905UniSTS
Cytogenetic Map2H3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163844614182113224Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145676855179677006Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2118112449174483070Mouse
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162791700182113224Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152857301169276004Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145355029179355165Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142751556178800659Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145386799179386921Mouse
1357435Epfq2_mepididymal fat pad weight QTL 2 (mouse)Not determined2162895006178800659Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135857301169857441Mouse
1558991Tailq4_mtail length QTL 4 (mouse)Not determined2162895006178800659Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2139124680173124809Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144673941181254801Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155982127182113224Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156354671182113224Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164873361182113224Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158236417178800659Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2150146982182113224Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151936377182113224Mouse
1301378Hpdty_mhindlimb polydactyly (mouse)Not determined2165822973168781758Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163844614182113224Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150370301182113224Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149394987182113224Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143931525169276004Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148822973182113224Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135857301169857441Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285893925181254801Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135857301169857441Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135857301169857441Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150370301182113224Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142586427176586530Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150370301182113224Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148396284182113224Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151867353174547331Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152487900182113224Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124600000168400000Mouse
12801461Intim1_mintima modifier 1 (mouse)2142586427176586530Mouse
11353826Bdln10_mbody length 10 (mouse)2140599562174599562Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135590624173607823Mouse
12910810Pwbwq2_mpre-weaning body weight QTL 2 (mouse)2160769245169952882Mouse
12910800Pwgrq3_mpre-weaning growth rate QTL 3 (mouse)2160769245169952882Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1755
Count of miRNA genes:644
Interacting mature miRNAs:825
Transcripts:ENSMUST00000099069, ENSMUST00000109191, ENSMUST00000131749
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000099069   ⟹   ENSMUSP00000096668
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2168,261,698 - 168,269,331 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109191   ⟹   ENSMUSP00000104815
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2168,260,117 - 168,281,132 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131749   ⟹   ENSMUSP00000120939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2168,269,099 - 168,281,736 (-)Ensembl
RefSeq Acc Id: NM_001081134   ⟹   NP_001074603
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392168,102,037 - 168,123,026 (-)NCBI
GRCm382168,260,117 - 168,281,106 (-)NCBI
MGSCv372168,087,198 - 168,094,831 (-)RGD
Celera2174,205,805 - 174,213,584 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001379458   ⟹   NP_001366387
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392168,102,037 - 168,123,453 (-)NCBI
GRCm382168,260,117 - 168,281,533 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001074603   ⟸   NM_001081134
- UniProtKB: A2BDX4 (UniProtKB/Swiss-Prot),   B2RVK9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001366387   ⟸   NM_001379458
RefSeq Acc Id: ENSMUSP00000096668   ⟸   ENSMUST00000099069
RefSeq Acc Id: ENSMUSP00000120939   ⟸   ENSMUST00000131749
RefSeq Acc Id: ENSMUSP00000104815   ⟸   ENSMUST00000109191
Protein Domains
BTB


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3616086 AgrOrtholog
Ensembl Genes ENSMUSG00000074575 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000096668 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000104815 UniProtKB/Swiss-Prot
  ENSMUSP00000120939 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000099069 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000109191 UniProtKB/Swiss-Prot
  ENSMUST00000131749 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VG_K_chnl UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:241794 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:3616086 ENTREZGENE
NCBI Gene 241794 ENTREZGENE
PANTHER PTHR11537 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ion_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kcng1 PhenoGen
PRINTS KV6CHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KVCHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.425102 ENTREZGENE
UniProt A2BDX4 ENTREZGENE
  A2BDX5_MOUSE UniProtKB/TrEMBL
  B2RVK9 ENTREZGENE, UniProtKB/TrEMBL
  KCNG1_MOUSE UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-01 Kcng1  potassium voltage-gated channel, subfamily G, member 1  AW536275  expressed sequence AW536275  Data Merged 737654 PROVISIONAL