8430430B14Rik (RIKEN cDNA 8430430B14 gene) - Rat Genome Database

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Gene: 8430430B14Rik (RIKEN cDNA 8430430B14 gene) Mus musculus
Analyze
Symbol: 8430430B14Rik
Name: RIKEN cDNA 8430430B14 gene
RGD ID: 1612993
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC78148; uncharacterized protein LOC78148
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391784,305,981 - 84,320,837 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1784,305,983 - 84,320,837 (+)EnsemblGRCm39 Ensembl
GRCm381783,998,552 - 84,013,408 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1783,998,554 - 84,013,408 (+)EnsemblGRCm38mm10GRCm38
Celera1788,355,636 - 88,372,997 (+)NCBICelera
Cytogenetic Map17E4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 8430430B14Rik
517 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse
14697708Stsl5_mSalmonella typhimurium susceptibility locus 5 (mouse)178080742991407428Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000234981
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1784,305,983 - 84,320,837 (+)Ensembl
GRCm38.p6 Ensembl1783,998,554 - 84,013,408 (+)Ensembl
RefSeq Acc Id: ENSMUST00000235072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1784,316,323 - 84,320,817 (+)Ensembl
GRCm38.p6 Ensembl1784,008,894 - 84,013,388 (+)Ensembl
RefSeq Acc Id: NR_130994
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391784,305,981 - 84,320,837 (+)NCBI
GRCm381783,998,552 - 84,013,408 (+)NCBI
Sequence:
Promoters
RGD ID:15094910
Promoter ID:EPDNEWNC_M2808
Type:multiple initiation site
Name:8430430B14Rik_1
Description:RIKEN cDNA 8430430B14 gene [Source:MGISymbol;Acc:MGI:1925398]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381783,998,545 - 83,998,605EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000117431 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000234981 ENTREZGENE
MGD MGI:1925398 ENTREZGENE
NCBI Gene 78148 ENTREZGENE
PhenoGen 8430430B14Rik PhenoGen
RNAcentral URS000081215C RNACentral