Rn18s (18S ribosomal RNA) - Rat Genome Database

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Gene: Rn18s (18S ribosomal RNA) Mus musculus
Analyze
Symbol: Rn18s
Name: 18S ribosomal RNA
RGD ID: 1612749
MGI Page MGI
Description: Is expressed in early conceptus; primary oocyte; secondary oocyte; and trunk.
Type: rrna
RefSeq Status: REVIEWED
Related Pseudogenes: Rn18s-rs5  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3863,180,891 - 3,201,670 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371739,983,299 - 39,985,147 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera63,342,789 - 3,343,725 (+)NCBICelera


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1311830   PMID:6179797   PMID:6365592   PMID:7490078   PMID:7644495   PMID:7689222   PMID:7715726   PMID:7754814   PMID:7774567   PMID:8190627   PMID:8452933   PMID:8601034  
PMID:8995758   PMID:9811942   PMID:9826522   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11734900   PMID:12466851   PMID:12520002   PMID:14610273  
PMID:14611805   PMID:15368895   PMID:15582152   PMID:15741177   PMID:15840001   PMID:16141072   PMID:16141073   PMID:16516892   PMID:16602821   PMID:17544522   PMID:17967808   PMID:18799693  
PMID:19752599   PMID:20858271   PMID:22735032   PMID:22961474   PMID:25723738   PMID:26178919   PMID:27477389   PMID:28893950   PMID:31064784   PMID:33472078   PMID:35554497   PMID:37353485  


Genomics

Markers in Region
RH124597  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5G2UniSTS
RH125423  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5G2UniSTS
AY036118  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,848,185 - 39,848,683UniSTSGRCm38
MGSCv371739,985,130 - 39,985,628UniSTSGRCm37
Cytogenetic Map17B1UniSTS
cM MapUN UniSTS
cM Map17 UniSTS
PMC133845P3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,847,174 - 39,847,525UniSTSGRCm38
MGSCv371739,984,119 - 39,984,470UniSTSGRCm37
Cytogenetic Map5G2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map17B1UniSTS
PMC152246P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,847,352 - 39,847,428UniSTSGRCm38
GRCm3863,201,441 - 3,201,517UniSTSGRCm38
MGSCv3763,151,441 - 3,151,517UniSTSGRCm37
MGSCv371739,984,297 - 39,984,373UniSTSGRCm37
Celera63,343,461 - 3,343,537UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
Rn18s  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,803 - 39,847,141UniSTSGRCm38
GRCm3863,200,892 - 3,201,230UniSTSGRCm38
MGSCv371739,983,748 - 39,984,086UniSTSGRCm37
MGSCv3763,150,892 - 3,151,230UniSTSGRCm37
Celera63,342,912 - 3,343,250UniSTS
Cytogenetic Map5G2UniSTS
cM Map17 UniSTS
PMC106412P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,371 - 39,846,981UniSTSGRCm38
MGSCv371739,983,316 - 39,983,926UniSTSGRCm37
Cytogenetic Map17B1UniSTS
PMC123151P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,803 - 39,847,051UniSTSGRCm38
GRCm3863,200,892 - 3,201,140UniSTSGRCm38
MGSCv3763,150,892 - 3,151,140UniSTSGRCm37
MGSCv371739,983,748 - 39,983,996UniSTSGRCm37
Celera63,342,912 - 3,343,160UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
PMC140912P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,806 - 39,846,960UniSTSGRCm38
GRCm3863,200,895 - 3,201,049UniSTSGRCm38
MGSCv3763,150,895 - 3,151,049UniSTSGRCm37
MGSCv371739,983,751 - 39,983,905UniSTSGRCm37
Celera63,342,915 - 3,343,069UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
PMC153210P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,842 - 39,846,980UniSTSGRCm38
GRCm3863,200,931 - 3,201,069UniSTSGRCm38
MGSCv3763,150,931 - 3,151,069UniSTSGRCm37
MGSCv371739,983,787 - 39,983,925UniSTSGRCm37
Celera63,342,951 - 3,343,089UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
PMC161419P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,847,384 - 39,847,872UniSTSGRCm38
MGSCv371739,984,329 - 39,984,817UniSTSGRCm37
Cytogenetic Map17B1UniSTS
MARC_13787-13788:1024669040:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38478,773,795 - 78,774,142UniSTSGRCm38
GRCm381739,847,737 - 39,848,098UniSTSGRCm38
MGSCv371739,984,682 - 39,985,043UniSTSGRCm37
MGSCv37478,419,699 - 78,420,046UniSTSGRCm37
Cytogenetic Map17B1UniSTS
PMC18377P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,847,210 - 39,848,023UniSTSGRCm38
MGSCv371739,984,155 - 39,984,968UniSTSGRCm37
Cytogenetic Map17B1UniSTS
PMC18810P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,701 - 39,846,837UniSTSGRCm38
GRCm3863,200,790 - 3,200,926UniSTSGRCm38
MGSCv3763,150,790 - 3,150,926UniSTSGRCm37
MGSCv371739,983,646 - 39,983,782UniSTSGRCm37
Celera63,342,810 - 3,342,946UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
PMC343294P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,811 - 39,847,616UniSTSGRCm38
MGSCv371739,983,756 - 39,984,561UniSTSGRCm37
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS
PMC350564P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381739,846,709 - 39,846,832UniSTSGRCm38
GRCm3863,200,798 - 3,200,921UniSTSGRCm38
MGSCv3763,150,798 - 3,150,921UniSTSGRCm37
MGSCv371739,983,654 - 39,983,777UniSTSGRCm37
Celera63,342,818 - 3,342,941UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map17B1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_003278
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3863,180,891 - 3,201,670 (+)ENTREZGENE
MGSCv371739,983,299 - 39,985,147 (+)RGD
Celera63,342,789 - 3,343,690 (+)ENTREZGENE
cM Map6 ENTREZGENE

Additional Information

Database Acc Id Source(s)
MGD MGI:97943 ENTREZGENE
NCBI Gene 19791 ENTREZGENE
PhenoGen Rn18s PhenoGen
RNAcentral URS00002A2E83 RNACentral