1700018A14Rik (RIKEN cDNA 1700018A14 gene) - Rat Genome Database

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Gene: 1700018A14Rik (RIKEN cDNA 1700018A14 gene) Mus musculus
Analyze
Symbol: 1700018A14Rik
Name: RIKEN cDNA 1700018A14 gene
RGD ID: 1611899
MGI Page MGI
Description: The existence of this gene is supported by only one cDNA, and the putative protein product has no support from other proteins. Therefore, the validity of this locus has not been established. [provided by RefSeq, Feb 2009]
Type: gene (Ensembl: TEC)
Previously known as: hypothetical protein LOC69391; uncharacterized protein LOC69391
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl1846,332,088 - 46,332,798 (+)EnsemblGRCm39 Ensembl
GRCm381846,199,021 - 46,199,731 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1846,199,021 - 46,199,731 (+)EnsemblGRCm38mm10GRCm38
MGSCv371846,358,675 - 46,359,385 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361846,358,675 - 46,359,385 (+)NCBIMGSCv36mm8
Celera1847,558,981 - 47,559,691 (+)NCBICelera
Cytogenetic Map18CNCBI
cM Map1824.43NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12040188   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:61
Count of miRNA genes:61
Interacting mature miRNAs:61
Transcripts:ENSMUST00000037090
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000195587
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1846,332,088 - 46,332,798 (+)Ensembl
GRCm38.p6 Ensembl1846,199,021 - 46,199,731 (+)Ensembl
RefSeq Acc Id: NM_001145259
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381846,199,021 - 46,199,731 (+)ENTREZGENE
MGSCv371846,358,675 - 46,359,385 (+)RGD
Celera1847,558,981 - 47,559,691 (+)RGD
cM Map18 ENTREZGENE
Protein Sequences
GenBank Protein BAB24396 (Get FASTA)   NCBI Sequence Viewer  
  EDL09988 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences

Promoters
RGD ID:6828950
Promoter ID:MM_KWN:25208
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung
Transcripts:NM_001145259,   NM_001170855
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361846,358,126 - 46,358,626 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000103616 Ensembl
MGD MGI:1916641 ENTREZGENE
NCBI Gene 69391 ENTREZGENE
PhenoGen 1700018A14Rik PhenoGen
UniProt Q9DA84_MOUSE UniProtKB/TrEMBL