4930573C15Rik (RIKEN cDNA 4930573C15 gene) - Rat Genome Database

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Gene: 4930573C15Rik (RIKEN cDNA 4930573C15 gene) Mus musculus
Analyze
Symbol: 4930573C15Rik
Name: RIKEN cDNA 4930573C15 gene
RGD ID: 1611259
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: BB018237; hypothetical protein LOC75949; uncharacterized protein LOC75949
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395146,640,647 - 146,644,306 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5146,643,432 - 146,644,306 (+)EnsemblGRCm39 Ensembl
GRCm385146,703,837 - 146,707,496 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5146,706,622 - 146,707,496 (+)EnsemblGRCm38mm10GRCm38
Celera5144,693,175 - 144,696,946 (+)NCBICelera
Cytogenetic Map5G3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

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Variants in 4930573C15Rik
197 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5139985755151658149Mouse

Markers in Region
BB018237  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385146,707,244 - 146,707,390UniSTSGRCm38
MGSCv375147,518,820 - 147,518,966UniSTSGRCm37
Celera5144,696,694 - 144,696,840UniSTS
Whitehead/MRC_RH51749.61UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000197707
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5146,643,432 - 146,644,306 (+)Ensembl
GRCm38.p6 Ensembl5146,706,622 - 146,707,496 (+)Ensembl
RefSeq Acc Id: XR_868703
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395146,640,647 - 146,644,306 (+)NCBI
GRCm385146,703,837 - 146,707,496 (+)NCBI
Sequence:
RefSeq Acc Id: XR_868704
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395146,642,666 - 146,644,306 (+)NCBI
GRCm385146,705,856 - 146,707,496 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000106020 Ensembl
MGD MGI:1923199 ENTREZGENE
NCBI Gene 75949 ENTREZGENE
PhenoGen 4930573C15Rik PhenoGen