2410003I16Rik (RIKEN cDNA 2410003I16 gene) - Rat Genome Database

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Gene: 2410003I16Rik (RIKEN cDNA 2410003I16 gene) Mus musculus
Analyze
Symbol: 2410003I16Rik
Name: RIKEN cDNA 2410003I16 gene
RGD ID: 1610982
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391693,811,514 - 93,817,025 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1693,811,682 - 93,815,012 (+)EnsemblGRCm39 Ensembl
GRCm381694,010,655 - 94,016,166 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1694,011,441 - 94,012,236 (+)EnsemblGRCm38mm10GRCm38
Celera1695,096,732 - 95,100,383 (+)NCBICelera
Cytogenetic Map16C4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 2410003I16Rik
267 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000231382
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,826 - 93,814,169 (+)Ensembl
GRCm38.p6 Ensembl1694,011,441 - 94,012,236 (+)Ensembl
RefSeq Acc Id: ENSMUST00000241575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,735 - 93,814,165 (+)Ensembl
RefSeq Acc Id: ENSMUST00000242397
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,731 - 93,815,009 (+)Ensembl
RefSeq Acc Id: ENSMUST00000243411
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,731 - 93,815,011 (+)Ensembl
RefSeq Acc Id: ENSMUST00000243925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,731 - 93,815,012 (+)Ensembl
RefSeq Acc Id: ENSMUST00000245248
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,811,682 - 93,815,011 (+)Ensembl
RefSeq Acc Id: XR_003951876
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391693,811,514 - 93,817,025 (+)NCBI
GRCm381694,010,655 - 94,016,166 (+)NCBI
Sequence:
Promoters
RGD ID:15094734
Promoter ID:EPDNEWNC_M2650
Type:multiple initiation site
Name:2410003I16Rik_1
Description:RIKEN cDNA 2410003I16 gene [Source:MGISymbol;Acc:MGI:3026974]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381694,011,397 - 94,011,457EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000116947 Ensembl
MGD MGI:3026974 ENTREZGENE
NCBI Gene 2410003I16Rik ENTREZGENE
PhenoGen 2410003I16Rik PhenoGen