Gpr62 (G protein-coupled receptor 62) - Rat Genome Database
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Gene: Gpr62 (G protein-coupled receptor 62) Mus musculus
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Symbol: Gpr62
Name: G protein-coupled receptor 62
RGD ID: 1610965
MGI Page MGI
Description: Exhibits identical protein binding activity. Involved in positive regulation of cAMP-mediated signaling. Predicted to localize to endosome; plasma membrane; and receptor complex. Orthologous to human GPR62 (G protein-coupled receptor 62); INTERACTS WITH bisphenol A; potassium dichromate; valproic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4933402E03Rik; G protein-coupled receptor 61 pseudogene; G protein-coupled receptor GPR62; G-protein coupled receptor 62; probable G-protein coupled receptor 62
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,341,161 - 106,343,184 (-)NCBIGRCm39mm39
GRCm389106,463,962 - 106,465,985 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,463,962 - 106,465,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,366,291 - 106,368,271 (-)NCBIGRCm37mm9NCBIm37
Celera9106,090,861 - 106,092,863 (-)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12679517   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:23382219   PMID:28912303  


Genomics

Comparative Map Data
Gpr62
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,341,161 - 106,343,184 (-)NCBIGRCm39mm39
GRCm389106,463,962 - 106,465,985 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,463,962 - 106,465,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,366,291 - 106,368,271 (-)NCBIGRCm37mm9NCBIm37
Celera9106,090,861 - 106,092,863 (-)NCBICelera
Cytogenetic Map9F1NCBI
GPR62
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl351,955,381 - 51,957,499 (+)EnsemblGRCh38hg38GRCh38
GRCh38351,955,381 - 51,957,499 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37351,989,330 - 51,991,520 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,964,370 - 51,966,560 (+)NCBINCBI36hg18NCBI36
Build 34351,964,436 - 51,966,559NCBI
Celera351,968,157 - 51,970,347 (+)NCBI
Cytogenetic Map3p21.2NCBI
HuRef352,052,668 - 52,054,858 (+)NCBIHuRef
CHM1_1351,942,017 - 51,944,207 (+)NCBICHM1_1
Gpr62
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08115,165,655 - 115,170,396 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,166,410 - 115,167,486 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,530,370 - 114,532,328 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,608,094 - 111,609,768 (-)NCBIRGSC3.4rn4RGSC3.4
Celera8106,415,136 - 106,419,877 (-)NCBICelera
Cytogenetic Map8q32NCBI
Gpr62
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555323,602,642 - 3,603,230 (+)NCBIChiLan1.0ChiLan1.0
GPR62
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1353,124,767 - 53,127,498 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0351,894,429 - 51,898,907 (+)NCBIMhudiblu_PPA_v0panPan3
GPR62
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2037,759,803 - 37,760,897 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12037,759,025 - 37,761,826 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gpr62
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365293,301,400 - 3,304,413 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR62
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,088,198 - 34,089,289 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,083,913 - 34,090,065 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,282,337 - 37,289,579 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR62
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,323,936 - 13,326,119 (+)NCBI
Gpr62
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247305,774,461 - 5,776,591 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:282
Count of miRNA genes:214
Interacting mature miRNAs:242
Transcripts:ENSMUST00000164834
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000164834   ⟹   ENSMUSP00000129055
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9106,463,962 - 106,465,938 (-)Ensembl
RefSeq Acc Id: NM_001159652   ⟹   NP_001153124
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399106,341,161 - 106,343,184 (-)NCBI
GRCm389106,463,962 - 106,465,985 (-)NCBI
MGSCv379106,366,291 - 106,368,271 (-)RGD
Celera9106,090,861 - 106,092,863 (-)RGD
cM Map9 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001153124 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAO85063 (Get FASTA)   NCBI Sequence Viewer  
  BAC25490 (Get FASTA)   NCBI Sequence Viewer  
  Q80UC6 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001153124   ⟸   NM_001159652
- UniProtKB: Q80UC6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129055   ⟸   ENSMUST00000164834

Promoters
RGD ID:8670734
Promoter ID:EPDNEW_M13398
Type:multiple initiation site
Name:Gpr62_1
Description:Mus musculus G protein-coupled receptor 62 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389106,465,984 - 106,466,044EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3525078 AgrOrtholog
Ensembl Genes ENSMUSG00000091735 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000129055 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000164834 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot
KEGG Report mmu:436090 UniProtKB/Swiss-Prot
MGD MGI:3525078 ENTREZGENE
NCBI Gene 436090 ENTREZGENE
Pfam 7tm_1 UniProtKB/Swiss-Prot
PhenoGen Gpr62 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot
UniGene Mm.482905 ENTREZGENE
UniProt GPR62_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q8CEQ6 UniProtKB/Swiss-Prot