1700122H20Rik (RIKEN cDNA 1700122H20 gene) - Rat Genome Database

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Gene: 1700122H20Rik (RIKEN cDNA 1700122H20 gene) Mus musculus
Analyze
Symbol: 1700122H20Rik
Name: RIKEN cDNA 1700122H20 gene
RGD ID: 1609758
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: Gm29205; hypothetical protein LOC73617
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39177,163,339 - 7,169,117 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl177,163,339 - 7,169,117 (+)EnsemblGRCm39 Ensembl
GRCm38176,895,940 - 6,901,718 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl176,895,940 - 6,901,718 (+)EnsemblGRCm38mm10GRCm38
MGSCv37177,099,434 - 7,123,971 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36177,100,289 - 7,106,067 (+)NCBIMGSCv36mm8
Cytogenetic Map17A1NCBI
cM Map174.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in 1700122H20Rik
181 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse

Markers in Region
RH125119  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38176,904,900 - 6,905,020UniSTSGRCm38
GRCm38177,979,217 - 7,979,337UniSTSGRCm38
MGSCv37178,172,082 - 8,172,202UniSTSGRCm37
MGSCv37177,109,249 - 7,109,369UniSTSGRCm37
Cytogenetic Map17A1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000188950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl177,163,339 - 7,169,117 (+)Ensembl
GRCm38.p6 Ensembl176,895,940 - 6,901,718 (+)Ensembl
RefSeq Acc Id: NR_152131
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39177,163,339 - 7,169,117 (+)NCBI
GRCm38176,895,940 - 6,901,718 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000099735 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000188950 ENTREZGENE
MGD MGI:1920867 ENTREZGENE
NCBI Gene 73617 ENTREZGENE
PhenoGen 1700122H20Rik PhenoGen
RNAcentral URS000078259A RNACentral