A930029G22Rik (RIKEN cDNA A930029G22 gene) - Rat Genome Database

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Gene: A930029G22Rik (RIKEN cDNA A930029G22 gene) Mus musculus
Analyze
Symbol: A930029G22Rik
Name: RIKEN cDNA A930029G22 gene
RGD ID: 1608875
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl1769,723,655 - 69,746,299 (-)EnsemblGRCm39 Ensembl
GRCm381769,423,126 - 69,440,240 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1769,416,660 - 69,439,304 (-)EnsemblGRCm38mm10GRCm38
MGSCv371769,766,738 - 69,768,533 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361769,766,738 - 69,768,533 (-)NCBIMGSCv36mm8
Celera1773,646,750 - 73,729,304 (-)NCBICelera
Cytogenetic Map17E1.3NCBI
cM Map1740.44NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:21267068   PMID:24316575  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:100
Count of miRNA genes:99
Interacting mature miRNAs:99
Transcripts:ENSMUST00000181032
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000181032
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1769,723,655 - 69,746,299 (-)Ensembl
GRCm38.p6 Ensembl1769,416,660 - 69,439,304 (-)Ensembl
RefSeq Acc Id: XR_003952217
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381769,423,126 - 69,440,240 (-)NCBI
Sequence:
Promoters
RGD ID:15094876
Promoter ID:EPDNEWNC_M2790
Type:multiple initiation site
Name:A930029G22Rik_1
Description:RIKEN cDNA A930029G22 gene [Source:MGISymbol;Acc:MGI:3605039]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381769,439,330 - 69,439,390EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000096988 Ensembl
MGD MGI:3605039 ENTREZGENE
NCBI Gene 654806 ENTREZGENE
PhenoGen A930029G22Rik PhenoGen