Mir182 (microRNA 182) - Rat Genome Database
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Gene: Mir182 (microRNA 182) Mus musculus
Analyze
Symbol: Mir182
Name: microRNA 182
RGD ID: 1608314
MGI Page MGI
Description: Involved in several processes, including cellular response to leukemia inhibitory factor; cellular response to lipopolysaccharide; and retinal cone cell development. Is expressed in several structures, including cranial ganglion; epithelium; eye; inner ear; and neural tube. Orthologous to human MIR182 (microRNA 182).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-182; Mirn; Mirn182; mmu-mir-1; mmu-mir-182
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39mm39
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. RGD automated import pipeline
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12554859   PMID:15538371   PMID:16369549   PMID:16381832   PMID:16682203   PMID:17251443   PMID:17369397   PMID:17597072   PMID:17604727   PMID:18452032   PMID:19279690   PMID:19416898  
PMID:19559694   PMID:19602392   PMID:19933188   PMID:20215419   PMID:20413612   PMID:20439489   PMID:20467336   PMID:20478254   PMID:20668074   PMID:21037258   PMID:21247879   PMID:21267068  
PMID:21360794   PMID:21518438   PMID:21768104   PMID:21822254   PMID:22300508   PMID:22381690   PMID:22431396   PMID:22889583   PMID:23341629   PMID:23646144   PMID:23823476   PMID:23825948  
PMID:23946534   PMID:24871856   PMID:24886554   PMID:25002228   PMID:25180607   PMID:25672759   PMID:25978641   PMID:26041499   PMID:26234681   PMID:26314219   PMID:26681446   PMID:26849109  
PMID:26888314   PMID:27035623   PMID:27183593   PMID:27207535   PMID:27242323   PMID:27396327   PMID:27556515   PMID:27607577   PMID:27664932   PMID:27893611   PMID:27923913   PMID:28013219  
PMID:28248712   PMID:28484004   PMID:28663557   PMID:28819115   PMID:28855441   PMID:28941704   PMID:29074972   PMID:29226948   PMID:29476110   PMID:30126905   PMID:30291236   PMID:30308195  
PMID:30575790   PMID:30578296   PMID:30625496   PMID:30924851   PMID:31318050   PMID:31411745   PMID:31884830   PMID:31908034   PMID:31942002   PMID:32736708   PMID:33443164  


Genomics

Comparative Map Data
Mir182
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39mm39
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
MIR182
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl7129,770,383 - 129,770,492 (-)EnsemblGRCh38hg38GRCh38
GRCh387129,770,383 - 129,770,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh377129,410,223 - 129,410,332 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,197,458 - 129,197,567 (-)NCBINCBI36hg18NCBI36
Celera7124,205,968 - 124,206,077 (-)NCBI
Cytogenetic Map7q32.2NCBI
HuRef7123,771,508 - 123,771,617 (-)NCBIHuRef
CHM1_17129,343,614 - 129,343,723 (-)NCBICHM1_1
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)NCBI

Position Markers
Mir182  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38630,165,773 - 30,166,779UniSTSGRCm38
MGSCv37630,115,773 - 30,116,779UniSTSGRCm37
Celera630,172,489 - 30,173,608UniSTS
cM Map6 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144496Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144496Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144496Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633535476335Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920738249326Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345314181Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348726677Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348726677Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348726677Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707543297169Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797246118070Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122246751334Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122246751334Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61770000053500000Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61773466351734784Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1773466351734784Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61773466351734784Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61963941153639411Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61963941153639411Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61963941153639411Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268671322775Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62007289554072895Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62380000057800000Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2831405962314181Mouse

miRNA Target Status

Confirmed Targets
Gene TargetMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Tbx1mmu-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCRFunctional MTI22381690
Pfn1mmu-miR-182-5pOncomiRDBexternal_infoNANA23430586
Foxf2mmu-miR-182-5pOncomiRDBexternal_infoNANA23383207
Snai2mmu-miR-182-5pOncomiRDBexternal_infoNANA23354685
Gna13mmu-miR-182-5pOncomiRDBexternal_infoNANA23329838
Pdcd4mmu-miR-182-5pOncomiRDBexternal_infoNANA23296900
Foxo3mmu-miR-182-5pOncomiRDBexternal_infoNANA23262295
Cyldmmu-miR-182-5pOncomiRDBexternal_infoNANA23006329
Mtss1mmu-miR-182-5pOncomiRDBexternal_infoNANA22681717
Creb1mmu-miR-182-5pOncomiRDBexternal_infoNANA22325466
Brca1mmu-miR-182-5pOncomiRDBexternal_infoNANA21195000
Rgs17mmu-miR-182-5pOncomiRDBexternal_infoNANA20420807
Foxo1mmu-miR-182-5pOncomiRDBexternal_infoNANA19574223
Foxo3mmu-miR-182-5pOncomiRDBexternal_infoNANA19188590

Predicted Targets
Summary Value
Count of predictions:22797
Count of gene targets:9226
Count of transcripts:15201
Interacting mature miRNAs:mmu-miR-182-3p, mmu-miR-182-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000102406
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)Ensembl
RefSeq Acc Id: NR_029569
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39630,165,917 - 30,165,991 (-)NCBI
GRCm38630,165,918 - 30,165,992 (-)ENTREZGENE
MGSCv37630,115,918 - 30,115,992 (-)RGD
Celera630,172,634 - 30,172,708 (-)RGD
cM Map6 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2676846 AgrOrtholog
Ensembl Genes ENSMUSG00000076361 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000102406 ENTREZGENE
MGD MGI:2676846 ENTREZGENE
miRBase MI0000224 ENTREZGENE
NCBI Gene 387177 ENTREZGENE
PhenoGen Mir182 PhenoGen
RNAcentral URS00003D5044 RNACentral
  URS000059D941 RNACentral
  URS000075DA6B RNACentral