Mir182 (microRNA 182) - Rat Genome Database
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Gene: Mir182 (microRNA 182) Mus musculus
Analyze
Symbol: Mir182
Name: microRNA 182
RGD ID: 1608314
MGI Page MGI
Description: Involved in several processes, including cellular response to leukemia inhibitory factor; cellular response to lipopolysaccharide; and retinal cone cell development. Is expressed in several structures, including cranial ganglion; epithelium; eye; inner ear; and neural tube. Orthologous to human MIR182 (microRNA 182).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-182; Mirn; Mirn182; mmu-mir-1; mmu-mir-182
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39mm39
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. RGD automated import pipeline
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12554859   PMID:15538371   PMID:16369549   PMID:16381832   PMID:16682203   PMID:17251443   PMID:17369397   PMID:17597072   PMID:17604727   PMID:18452032   PMID:19279690   PMID:19416898  
PMID:19559694   PMID:19602392   PMID:19933188   PMID:20215419   PMID:20413612   PMID:20439489   PMID:20467336   PMID:20478254   PMID:20668074   PMID:21037258   PMID:21247879   PMID:21267068  
PMID:21360794   PMID:21518438   PMID:21768104   PMID:21822254   PMID:22300508   PMID:22381690   PMID:22431396   PMID:22889583   PMID:23341629   PMID:23646144   PMID:23823476   PMID:23825948  
PMID:23946534   PMID:24871856   PMID:24886554   PMID:25002228   PMID:25180607   PMID:25672759   PMID:25978641   PMID:26041499   PMID:26234681   PMID:26314219   PMID:26681446   PMID:26849109  
PMID:26888314   PMID:27035623   PMID:27183593   PMID:27207535   PMID:27242323   PMID:27396327   PMID:27556515   PMID:27607577   PMID:27664932   PMID:27893611   PMID:27923913   PMID:28013219  
PMID:28248712   PMID:28484004   PMID:28663557   PMID:28819115   PMID:28855441   PMID:28941704   PMID:29074972   PMID:29226948   PMID:29476110   PMID:30126905   PMID:30291236   PMID:30308195  
PMID:30575790   PMID:30578296   PMID:30625496   PMID:30924851   PMID:31318050   PMID:31411745   PMID:31884830   PMID:31908034   PMID:31942002   PMID:32736708   PMID:33443164  


Genomics

Comparative Map Data
Mir182
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39mm39
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
MIR182
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl7129,770,383 - 129,770,492 (-)EnsemblGRCh38hg38GRCh38
GRCh387129,770,383 - 129,770,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh377129,410,223 - 129,410,332 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,197,458 - 129,197,567 (-)NCBINCBI36hg18NCBI36
Celera7124,205,968 - 124,206,077 (-)NCBI
Cytogenetic Map7q32.2NCBI
HuRef7123,771,508 - 123,771,617 (-)NCBIHuRef
CHM1_17129,343,614 - 129,343,723 (-)NCBICHM1_1
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)NCBI

Position Markers
Mir182  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38630,165,773 - 30,166,779UniSTSGRCm38
MGSCv37630,115,773 - 30,116,779UniSTSGRCm37
Celera630,172,489 - 30,173,608UniSTS
cM Map6 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144496Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144496Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144496Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633535476335Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920738249326Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345314181Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348726677Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348726677Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348726677Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707543297169Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797246118070Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122246751334Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122246751334Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61770000053500000Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61773466351734784Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1773466351734784Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61773466351734784Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61963941153639411Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61963941153639411Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61963941153639411Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268671322775Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62007289554072895Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62380000057800000Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2831405962314181Mouse

miRNA Target Status

Confirmed Targets
Gene TargetMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Tbx1mmu-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCRFunctional MTI22381690
Pfn1mmu-miR-182-5pOncomiRDBexternal_infoNANA23430586
Foxf2mmu-miR-182-5pOncomiRDBexternal_infoNANA23383207
Snai2mmu-miR-182-5pOncomiRDBexternal_infoNANA23354685
Gna13mmu-miR-182-5pOncomiRDBexternal_infoNANA23329838
Pdcd4mmu-miR-182-5pOncomiRDBexternal_infoNANA23296900
Foxo3mmu-miR-182-5pOncomiRDBexternal_infoNANA23262295
Cyldmmu-miR-182-5pOncomiRDBexternal_infoNANA23006329
Mtss1mmu-miR-182-5pOncomiRDBexternal_infoNANA22681717
Creb1mmu-miR-182-5pOncomiRDBexternal_infoNANA22325466
Brca1mmu-miR-182-5pOncomiRDBexternal_infoNANA21195000
Rgs17mmu-miR-182-5pOncomiRDBexternal_infoNANA20420807
Foxo1mmu-miR-182-5pOncomiRDBexternal_infoNANA19574223
Foxo3mmu-miR-182-5pOncomiRDBexternal_infoNANA19188590

Predicted Targets
Summary Value
Count of predictions:22797
Count of gene targets:9226
Count of transcripts:15201
Interacting mature miRNAs:mmu-miR-182-3p, mmu-miR-182-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000102406
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)Ensembl
RefSeq Acc Id: NR_029569
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39630,165,917 - 30,165,991 (-)NCBI
GRCm38630,165,918 - 30,165,992 (-)ENTREZGENE
MGSCv37630,115,918 - 30,115,992 (-)RGD
Celera630,172,634 - 30,172,708 (-)RGD
cM Map6 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2676846 AgrOrtholog
Ensembl Genes ENSMUSG00000076361 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000102406 ENTREZGENE
MGD MGI:2676846 ENTREZGENE
miRBase MI0000224 ENTREZGENE
NCBI Gene 387177 ENTREZGENE
PhenoGen Mir182 PhenoGen
RNAcentral URS00003D5044 RNACentral
  URS000059D941 RNACentral
  URS000075DA6B RNACentral